FFCP PHASE1:Hg19::chr9:136242909..136242953,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11476 | |||
|TSSclassifier=S | |||
|UniProt=Q5T8U5,B7Z6A4 | |||
|association_with_transcript=0bp_to_ENST00000371991,ENST00000545297_5end | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_1_at_SURF4_5end | |||
|id=chr9:136242909..136242953,- | |||
|ontology_enrichment_celltype=CL:0000548!7.12e-37!679;CL:0000004!7.12e-37!679;CL:0000255!7.12e-37!679;CL:0000012!3.99e-36!682;CL:0000144!4.97e-36!625;CL:0000055!1.27e-34!180;CL:0002371!1.30e-34!591;CL:0000220!5.86e-26!246;CL:0002321!2.44e-25!248;CL:0000222!2.34e-24!119;CL:0000183!2.12e-21!59;CL:0000003!1.04e-19!722;CL:0000680!1.13e-19!57;CL:0000056!1.13e-19!57;CL:0000355!1.13e-19!57;CL:0000187!5.21e-19!54;CL:0000192!3.33e-17!42;CL:0000514!3.33e-17!42;CL:0000057!2.27e-16!75;CL:0000393!2.01e-15!60;CL:0000211!2.01e-15!60;CL:0000359!2.66e-14!32;CL:0000063!4.00e-11!578;CL:0000048!1.65e-10!430;CL:0000723!1.93e-10!436;CL:0000034!1.77e-09!444;CL:0000066!6.46e-08!254;CL:0002494!1.27e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.14e-13;32!CL:0000192;3.37e-12;43!CL:0000187;1.14e-10;55!CL:0000134;2.84e-08;55!CL:0000393;3.43e-08;61!CL:0000211;3.43e-08;61!CL:0000057;1.15e-07;73!CL:0002494;1.21e-07;16!CL:0000723;3.17e-07;61!CL:0000048;5.32e-07;58 | |||
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| |||
|short_description=p1@SURF4 | |||
}} |
Revision as of 08:01, 14 September 2013
Short description: | p1@SURF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SURF4_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000371991, ENST00000545297_5end |
EntrezGene: | SURF4 |
HGNC: | 11476 |
UniProt: | Q5T8U5B7Z6A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.64e-25 | 250 |
mesodermal cell | 2.08e-24 | 121 |
muscle precursor cell | 2.30e-19 | 58 |
myoblast | 2.30e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.30e-19 | 58 |
muscle cell | 1.07e-18 | 55 |
smooth muscle cell | 7.71e-17 | 43 |
smooth muscle myoblast | 7.71e-17 | 43 |
fibroblast | 7.90e-17 | 76 |
electrically responsive cell | 3.39e-15 | 61 |
electrically active cell | 3.39e-15 | 61 |
vascular associated smooth muscle cell | 2.66e-14 | 32 |
multi fate stem cell | 3.54e-10 | 427 |
somatic stem cell | 4.13e-10 | 433 |
stem cell | 3.66e-09 | 441 |
epithelial cell | 6.14e-08 | 253 |
cardiocyte | 1.27e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.