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FFCP PHASE1:Mm9::chr5:77394964..77394967,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67054|HGNC=|UniProt=|association_with_transcript=-214bp_to_ENSMUST00000154688_5end|description=CAGE_peak_5_at_Paics_5end|id=chr5:77394964..77394967,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.51e-17!193;UBERON:0004120!2.51e-17!193;UBERON:0006603!2.51e-17!193;UBERON:0001048!2.84e-16!147;UBERON:0001041!4.46e-14!92;UBERON:0000077!6.47e-14!97;UBERON:0003104!1.71e-13!131;UBERON:0009142!1.71e-13!131;UBERON:0000466!7.73e-13!79;UBERON:0009569!1.66e-11!66;UBERON:0005057!9.80e-11!51;UBERON:0000949!6.62e-10!72;UBERON:0005172!1.34e-09!49;UBERON:0005173!1.34e-09!49;UBERON:0002417!1.34e-09!49;UBERON:0000916!1.34e-09!49;UBERON:0005177!1.41e-09!85;UBERON:0002368!8.44e-09!60;UBERON:0002530!2.00e-08!65;UBERON:0000464!3.04e-07!57;UBERON:0009854!3.82e-07!23;UBERON:0009856!3.82e-07!23;UBERON:0002100!3.97e-07!98;UBERON:0002405!6.22e-07!70;UBERON:0004921!7.40e-07!126;UBERON:0004185!7.40e-07!126;UBERON:0005911!8.31e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.24e-14,134;UBERON:0001041,9.86e-13,80;UBERON:0005177,2.48e-12,79;UBERON:0009569,2.11e-11,66;UBERON:0000949,9.86e-11,72;UBERON:0002100,3.12e-10,90;UBERON:0005172,7.85e-10,49;UBERON:0005173,7.85e-10,49;UBERON:0002417,7.85e-10,49;UBERON:0000916,7.85e-10,49;UBERON:0002368,1.27e-09,60;UBERON:0002530,1.18e-08,65;UBERON:0005911,1.17e-07,69;UBERON:0009854,1.58e-07,23;UBERON:0009856,1.58e-07,23;UBERON:0002107,6.48e-07,22;UBERON:0007499,6.48e-07,22;UBERON:0006925,6.48e-07,22;UBERON:0009497,6.48e-07,22;UBERON:0000015,6.48e-07,22;UBERON:0002423,6.48e-07,22;UBERON:0006235,6.48e-07,22;UBERON:0008835,6.48e-07,22;UBERON:0003894,6.48e-07,22;UBERON:0004161,6.48e-07,22;UBERON:0008836,6.48e-07,22|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.93684985162364,2.53419699873,2.34064526321993,1.88339765048055,2.87179772383211,2.56801094896809,1.66098764596095,0.666219523631325,2.02475267389826,4.19737126876888,1.41957974411207,3.15363197293199,2.12194825899015,1.19060606211498,3.87234709683453,3.13439746966722,0.47997726838022,0.68822784320151,0,0,0,0.190023419456374,0.504060259519861,0.443461021310609,0,1.23012957516914,0,0.288851619751275,0.664938581433969,1.22501613757421,0,0,0,0,0,0,1.6366586336825,1.52065396829272,2.38610777810186,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,1.67782606057736,0.725362142011344,5.04140698713696,1.02903774414379,1.43266719969378,0.515672092277442,1.01158230429799,0,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.622137673850866,0.540023753326763,0.630974884054146,0.285650984403804,0.441737081903227,0.734944795289724,0.670918297127655,0,0,0.127687338085188,0.46081959976873,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0.61119299110724,0.589257170947335,0.427115042397309,0.372798891650601,0.227178579999552,0.604572480854284,0.579728977403356,1.72084775396277,0,2.15881276655127,7.79731700937203,3.58421509677868,0.421333260395256,0.340860645156116,1.03914401841148,1.41335829804136,0.422530259330042,1.28326477414318,0,0,1.5154372870785,0.506719730950197,1.01104889002957,1.37020655662872,1.03575153458869,1.63286352971307,1.73485326766136,1.82679286987285,1.84492397804847,1.65794904607885,3.99801604261396,1.13099932196708,1.48316980640624,0.86759614151947,0,1.94120219936891,0.883366073841574,3.39412677194655,5.59175283654366,1.17112318804619,0.83778682725382,1.27728527604296,1.31796636956512,0.599902730993408,1.14363204365758,0.748953197024114,0,0.628271760564322,0.695297280769106,0.511430914660661,1.24672826735736,0.648965052271031,2.74966282395854,1.99051152976149,2.77995034277042,1.26265113531884,3.12289063110489,1.83921683546778,1.0803727788321,2.56198190320716,1.90502197623718,2.562274405697,2.71735001223214,2.32833033665114,1.29340795759705,3.59301552318857,2.63926686245923,1.09597866213787,2.78047249225598,1.39300866608867,0.823128545631774,3.58261680273288,0.702213187313235,0.257347907114715,1.70498099637356,2.07125772535502,2.11073453982987,1.44049649168812,2.3674473558521,2.75469924446365,2.46827380619805,2.55787339225449,1.60964040839772,1.63471479314037,1.48103864922132,1.64167464079095,1.13496333364198,1.75439984910399,0.878200461164203,1.20785776884335,1.05144974282064,0.308713837137853,0,0.264450566663544,1.91959425481711,2.09013004674395,2.06187938115349,1.81515172161008,0.22237804384487,0.951128130562796,2.37264530772256,0,1.25667604400135,1.79060824837036,0.779856348476481,0.898819408654221,1.08069024937347,0.597423819763102,0.948339504765408,2.51346727741403,3.38123207019241,2.03651327845314,1.93952487167626,1.54298803758701,1.89709611372772,1.62371162777562,3.29697328466887,1.1105744752962,3.85388415213294,1.16791574001266,3.53806191203765,3.59779379815766,1.42002084971952,1.92941727801933,2.80088436959562,1.72617682470486,3.89124544260085,4.11842119782122,8.62609239164127,4.83783231969054,3.43241440426017,3.53610429125956,3.40855085691633,5.78932225636041,1.4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|EntrezGene=67054
|HGNC=
|UniProt=
|association_with_transcript=-214bp_to_ENSMUST00000154688_5end
|description=CAGE_peak_5_at_Paics_5end
|id=chr5:77394964..77394967,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!2.51e-17!193;UBERON:0004120!2.51e-17!193;UBERON:0006603!2.51e-17!193;UBERON:0001048!2.84e-16!147;UBERON:0001041!4.46e-14!92;UBERON:0000077!6.47e-14!97;UBERON:0003104!1.71e-13!131;UBERON:0009142!1.71e-13!131;UBERON:0000466!7.73e-13!79;UBERON:0009569!1.66e-11!66;UBERON:0005057!9.80e-11!51;UBERON:0000949!6.62e-10!72;UBERON:0005172!1.34e-09!49;UBERON:0005173!1.34e-09!49;UBERON:0002417!1.34e-09!49;UBERON:0000916!1.34e-09!49;UBERON:0005177!1.41e-09!85;UBERON:0002368!8.44e-09!60;UBERON:0002530!2.00e-08!65;UBERON:0000464!3.04e-07!57;UBERON:0009854!3.82e-07!23;UBERON:0009856!3.82e-07!23;UBERON:0002100!3.97e-07!98;UBERON:0002405!6.22e-07!70;UBERON:0004921!7.40e-07!126;UBERON:0004185!7.40e-07!126;UBERON:0005911!8.31e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.24e-14,134;UBERON:0001041,9.86e-13,80;UBERON:0005177,2.48e-12,79;UBERON:0009569,2.11e-11,66;UBERON:0000949,9.86e-11,72;UBERON:0002100,3.12e-10,90;UBERON:0005172,7.85e-10,49;UBERON:0005173,7.85e-10,49;UBERON:0002417,7.85e-10,49;UBERON:0000916,7.85e-10,49;UBERON:0002368,1.27e-09,60;UBERON:0002530,1.18e-08,65;UBERON:0005911,1.17e-07,69;UBERON:0009854,1.58e-07,23;UBERON:0009856,1.58e-07,23;UBERON:0002107,6.48e-07,22;UBERON:0007499,6.48e-07,22;UBERON:0006925,6.48e-07,22;UBERON:0009497,6.48e-07,22;UBERON:0000015,6.48e-07,22;UBERON:0002423,6.48e-07,22;UBERON:0006235,6.48e-07,22;UBERON:0008835,6.48e-07,22;UBERON:0003894,6.48e-07,22;UBERON:0004161,6.48e-07,22;UBERON:0008836,6.48e-07,22
|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.93684985162364,2.53419699873,2.34064526321993,1.88339765048055,2.87179772383211,2.56801094896809,1.66098764596095,0.666219523631325,2.02475267389826,4.19737126876888,1.41957974411207,3.15363197293199,2.12194825899015,1.19060606211498,3.87234709683453,3.13439746966722,0.47997726838022,0.68822784320151,0,0,0,0.190023419456374,0.504060259519861,0.443461021310609,0,1.23012957516914,0,0.288851619751275,0.664938581433969,1.22501613757421,0,0,0,0,0,0,1.6366586336825,1.52065396829272,2.38610777810186,0,0.218025156380447,0,0.388859798148567,0.279972843250725,0,1.67782606057736,0.725362142011344,5.04140698713696,1.02903774414379,1.43266719969378,0.515672092277442,1.01158230429799,0,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.622137673850866,0.540023753326763,0.630974884054146,0.285650984403804,0.441737081903227,0.734944795289724,0.670918297127655,0,0,0.127687338085188,0.46081959976873,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0.61119299110724,0.589257170947335,0.427115042397309,0.372798891650601,0.227178579999552,0.604572480854284,0.579728977403356,1.72084775396277,0,2.15881276655127,7.79731700937203,3.58421509677868,0.421333260395256,0.340860645156116,1.03914401841148,1.41335829804136,0.422530259330042,1.28326477414318,0,0,1.5154372870785,0.506719730950197,1.01104889002957,1.37020655662872,1.03575153458869,1.63286352971307,1.73485326766136,1.82679286987285,1.84492397804847,1.65794904607885,3.99801604261396,1.13099932196708,1.48316980640624,0.86759614151947,0,1.94120219936891,0.883366073841574,3.39412677194655,5.59175283654366,1.17112318804619,0.83778682725382,1.27728527604296,1.31796636956512,0.599902730993408,1.14363204365758,0.748953197024114,0,0.628271760564322,0.695297280769106,0.511430914660661,1.24672826735736,0.648965052271031,2.74966282395854,1.99051152976149,2.77995034277042,1.26265113531884,3.12289063110489,1.83921683546778,1.0803727788321,2.56198190320716,1.90502197623718,2.562274405697,2.71735001223214,2.32833033665114,1.29340795759705,3.59301552318857,2.63926686245923,1.09597866213787,2.78047249225598,1.39300866608867,0.823128545631774,3.58261680273288,0.702213187313235,0.257347907114715,1.70498099637356,2.07125772535502,2.11073453982987,1.44049649168812,2.3674473558521,2.75469924446365,2.46827380619805,2.55787339225449,1.60964040839772,1.63471479314037,1.48103864922132,1.64167464079095,1.13496333364198,1.75439984910399,0.878200461164203,1.20785776884335,1.05144974282064,0.308713837137853,0,0.264450566663544,1.91959425481711,2.09013004674395,2.06187938115349,1.81515172161008,0.22237804384487,0.951128130562796,2.37264530772256,0,1.25667604400135,1.79060824837036,0.779856348476481,0.898819408654221,1.08069024937347,0.597423819763102,0.948339504765408,2.51346727741403,3.38123207019241,2.03651327845314,1.93952487167626,1.54298803758701,1.89709611372772,1.62371162777562,3.29697328466887,1.1105744752962,3.85388415213294,1.16791574001266,3.53806191203765,3.59779379815766,1.42002084971952,1.92941727801933,2.80088436959562,1.72617682470486,3.89124544260085,4.11842119782122,8.62609239164127,4.83783231969054,3.43241440426017,3.53610429125956,3.40855085691633,5.78932225636041,1.47802552133284,2.08440552947533,3.42226450528254,1.86719594352707,5.39787571063555,2.1775813467436,0.714130922658041,3.31727201358258,2.52216230569906,3.76489972402917,0.956728611944923,3.11340297959902,2.41758974612254,2.60368305446721,1.50791283939272,3.26343410291226,0.983528546038072,0.827810238914197,1.28440471990234,0.468846746368813,0.163934945376675,2.27223834483936,2.2085575359138,0,1.93881057959519,1.67278158566786,1.78238939265915,0.849229592366497,2.83367491172426,2.04579100537918,1.58115111178609,1.60660658210904,0.709700426041343,1.06839362200353,3.58351310577867,1.64970122972535,2.65490276679926,1.94224508923985,2.41858845571801,1.13163047853539,0.885905678642318,2.15204603560749,1.80899805217755,2.54473610634254,4.27796854061666,1.8962205476149,3.16255825724996,0,3.40439605753788,1.62054984628179,0.129358683782755,1.92903331528433,1.59606210278046,1.07021290561242,1.64549020602121,1.2178597964584,2.11204537257339,0.847328283455281,0.882113592219848,1.31909002353184,2.26050197374268,1.68876189798836,1.67121281604391,1.64140899745061,1.45740418314925,0.556275906031529,2.05045056957423,2.47664241555867,1.48155621895769,5.08594833912666,3.55404992074665,2.0590035588587,0.679913719975421,0.839708713941948,0.276399947608848,0.954670618015114,1.89801596148681,1.42323626988794,1.18805874903981,1.46361807210128,2.62035076495413,2.83215127408124,2.14898984885873,2.09404753587224,0.90730481304255,3.10669656543463,0.56369293868419,2.0932316446157,1.98550188548517,2.33341426012857,1.54991788173277,2.19642963138012,2.8165737274981,2.47388331203505,2.41176492179135,1.20792060413003,2.88030006257865,3.47612232690996,2.22997736819181,2.36235201479103,2.20865399062252,2.68540043501222,2.38417625737518,1.68273629327956,3.39685912501528,2.3222283488074,2.81965184623499,3.2264379243789,1.07203668813728,2.88635524920988,1.98690733708667,0.680191150845634,2.21985953374065,2.87084341150322,2.68615386182526,1.15913756419314,1.87682475451182,1.83151624267265,3.42989406526505,2.00628841614145,0,0.920650473014354,0,0.515559547031063,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,1.55328093525546,0.415149390336707,3.99024873401031,2.56100408631201,2.91728060481953,0.628839487883947,0.551530525350042,1.33348036680969,1.44224540067226,1.60459604795908,2.02157769411038,1.77435509923168,1.88626341386076,0.842773567228942,1.21647789569252,0.689225627467359,1.42888107384922,1.15884325944855,1.35036454324594,0.824171801606613,0.588795680537589,1.71434626192708,1.24233064311536,0.715308569841963,1.59881058295561,1.31753132581463,1.69229215783353,1.82927972872773,2.36762740294059,1.7654534799962,2.24456908663095,1.06771516311757,1.18205378850676,0.409231043169689,1.85924209423159,1.92906610981141,0.499621155875892,2.57324769289949,1.28922632428979,2.29545998482612,1.10295709559758,1.39120701372253
|short_description=p5@Paics
}}

Revision as of 08:03, 14 September 2013

Short description:p5@Paics
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Paics_5end
Coexpression cluster:NA
Association with transcript: -214bp_to_ENSMUST00000154688_5end
EntrezGene:Paics
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Paics

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium2.24e-14134
foregut9.86e-1380
trunk region element2.48e-1279
subdivision of trunk2.11e-1166
endocrine system9.86e-1172
trunk3.12e-1090
abdomen element7.85e-1049
abdominal segment element7.85e-1049
abdominal segment of trunk7.85e-1049
abdomen7.85e-1049
endocrine gland1.27e-0960
gland1.18e-0865
endo-epithelium1.17e-0769
digestive tract diverticulum1.58e-0723
sac1.58e-0723
liver6.48e-0722
epithelial sac6.48e-0722
digestive gland6.48e-0722
epithelium of foregut-midgut junction6.48e-0722
anatomical boundary6.48e-0722
hepatobiliary system6.48e-0722
foregut-midgut junction6.48e-0722
hepatic diverticulum6.48e-0722
liver primordium6.48e-0722
septum transversum6.48e-0722
liver bud6.48e-0722







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