FFCP PHASE1:Mm9::chr6:86619601..86619640,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=386|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:86619601..86619640,+|id=chr6:86619601..86619640,+|ontology_enrichment_celltype=CL:0000063!1.03e-08!66;CL:0002563!2.20e-07!9;CL:0002251!2.20e-07!9;CL:0000988!7.66e-07!32;CL:0002032!7.66e-07!32;CL:0000037!7.66e-07!32;CL:0000566!7.66e-07!32;CL:0000837!7.66e-07!32|ontology_enrichment_celltype_v019_2=CL:0000624,6.30e-13,8;CL:0002563,1.62e-12,9;CL:0002251,1.62e-12,9;CL:0000791,2.00e-11,9;CL:0000789,2.00e-11,9;CL:0002420,2.00e-11,9;CL:0002419,2.00e-11,9;CL:0000790,2.00e-11,9;CL:0000084,3.07e-09,11;CL:0000827,3.07e-09,11;CL:0000239,3.95e-09,6;CL:0000677,3.95e-09,6;CL:0000584,3.95e-09,6;CL:0000838,2.03e-08,12;CL:0000893,4.76e-08,6;CL:0002489,4.76e-08,6;CL:0000898,4.76e-08,6;CL:0000809,4.76e-08,6;CL:0000810,4.76e-08,6;CL:0000895,4.76e-08,6;CL:0000808,4.76e-08,6;CL:0000894,4.76e-08,6;CL:0000806,4.76e-08,6;CL:0000807,4.76e-08,6;CL:0000805,4.76e-08,6;CL:0002425,4.76e-08,6;CL:0002436,4.76e-08,6;CL:0002427,4.76e-08,6;CL:0002428,4.76e-08,6;CL:0002429,4.76e-08,6;CL:0002433,4.76e-08,6;CL:0002431,4.76e-08,6;CL:0002432,4.76e-08,6;CL:0000723,6.66e-08,91;CL:0000048,6.66e-08,91;CL:0000075,8.05e-08,7;CL:0000542,1.00e-07,13;CL:0000051,1.00e-07,13;CL:0002076,3.11e-07,15;CL:0000034,3.56e-07,97;CL:0000066,4.52e-07,25;CL:0000223,4.96e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.11e-10,3;DOID:4045,2.11e-10,3;DOID:0050686,1.25e-08,6|ontology_enrichment_uberon=UBERON:0000344!3.54e-08!15;UBERON:0001242!4.08e-08!13;UBERON:0000060!4.08e-08!13;UBERON:0001262!4.08e-08!13;UBERON:0004786!4.08e-08!13;UBERON:0000485!1.11e-07!11;UBERON:0003350!2.20e-07!9;UBERON:0004808!2.20e-07!9;UBERON:0001277!2.20e-07!9;UBERON:0004923!4.87e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.62e-12,9;UBERON:0004808,1.62e-12,9;UBERON:0001277,1.62e-12,9;UBERON:0000485,4.06e-10,11;UBERON:0001242,1.87e-08,13;UBERON:0001262,1.87e-08,13;UBERON:0004786,1.87e-08,13;UBERON:0000344,3.11e-07,15|phase1_expression=0.480446541314382,3.14077866875425,4.54999239389536,9.67885476181856,9.01612313903425,0.671517087647559,0.700837921786577,1.93684985162364,1.267098499365,3.04283884218592,0.171217968225505,0.0797721589953364,1.36960583944965,1.22388563386596,0.999329285446988,0.607425802169478,0,0.157731082679119,0.274228867211478,0.42438965179803,0,0.496454756004426,0.522399578277871,0.319984845586813,0.22940928106717,3.44539178469012,0.430761996159075,0.646413698057667,0.380046838912748,0.252030129759931,0.665191531965914,1.27006134691926,0,0,2.59966457776147,0.664938581433969,1.83752420636132,5.02237956884289,3.906676722619,2.61761871986899,13.5293242247133,8.19654581950135,2.42755176515577,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.439372365468944,0.777719596297134,0.279972843250725,0,0.671130424230945,2.17608642603403,0.336093799142464,0,0.286533439938757,0,0.202316460859598,0,0,0.677689064138264,1.77858959222228,0,0,0.7104801149461,0.599200221036809,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0,2.89864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0,0.301445281105245,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0.239630249011841,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.497627882440372,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0,0,0.330418782983798,1.05780226665418,0,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0.432276099749388,0.597423819763102,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0.482354319504834,0.25462585178142,0.575392274901621,0.324270453550071,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0.477937595905104,1.78238939265915,0.566153061577665,0.404810701674894,1.16902343164525,1.18586333383957,0.642642632843614,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,1.05418608574999,1.03135543248187,0.340439605753788,0,0.517434735131018,0.428674070063185,0,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0,0.49465875882444,0.161464426695906,0.180938774784468,0.119372344003136,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=386 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:86619601..86619640,+ | |||
|id=chr6:86619601..86619640,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.03e-08!66;CL:0002563!2.20e-07!9;CL:0002251!2.20e-07!9;CL:0000988!7.66e-07!32;CL:0002032!7.66e-07!32;CL:0000037!7.66e-07!32;CL:0000566!7.66e-07!32;CL:0000837!7.66e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.30e-13,8;CL:0002563,1.62e-12,9;CL:0002251,1.62e-12,9;CL:0000791,2.00e-11,9;CL:0000789,2.00e-11,9;CL:0002420,2.00e-11,9;CL:0002419,2.00e-11,9;CL:0000790,2.00e-11,9;CL:0000084,3.07e-09,11;CL:0000827,3.07e-09,11;CL:0000239,3.95e-09,6;CL:0000677,3.95e-09,6;CL:0000584,3.95e-09,6;CL:0000838,2.03e-08,12;CL:0000893,4.76e-08,6;CL:0002489,4.76e-08,6;CL:0000898,4.76e-08,6;CL:0000809,4.76e-08,6;CL:0000810,4.76e-08,6;CL:0000895,4.76e-08,6;CL:0000808,4.76e-08,6;CL:0000894,4.76e-08,6;CL:0000806,4.76e-08,6;CL:0000807,4.76e-08,6;CL:0000805,4.76e-08,6;CL:0002425,4.76e-08,6;CL:0002436,4.76e-08,6;CL:0002427,4.76e-08,6;CL:0002428,4.76e-08,6;CL:0002429,4.76e-08,6;CL:0002433,4.76e-08,6;CL:0002431,4.76e-08,6;CL:0002432,4.76e-08,6;CL:0000723,6.66e-08,91;CL:0000048,6.66e-08,91;CL:0000075,8.05e-08,7;CL:0000542,1.00e-07,13;CL:0000051,1.00e-07,13;CL:0002076,3.11e-07,15;CL:0000034,3.56e-07,97;CL:0000066,4.52e-07,25;CL:0000223,4.96e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.11e-10,3;DOID:4045,2.11e-10,3;DOID:0050686,1.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.54e-08!15;UBERON:0001242!4.08e-08!13;UBERON:0000060!4.08e-08!13;UBERON:0001262!4.08e-08!13;UBERON:0004786!4.08e-08!13;UBERON:0000485!1.11e-07!11;UBERON:0003350!2.20e-07!9;UBERON:0004808!2.20e-07!9;UBERON:0001277!2.20e-07!9;UBERON:0004923!4.87e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.62e-12,9;UBERON:0004808,1.62e-12,9;UBERON:0001277,1.62e-12,9;UBERON:0000485,4.06e-10,11;UBERON:0001242,1.87e-08,13;UBERON:0001262,1.87e-08,13;UBERON:0004786,1.87e-08,13;UBERON:0000344,3.11e-07,15 | |||
|phase1_expression=0.480446541314382,3.14077866875425,4.54999239389536,9.67885476181856,9.01612313903425,0.671517087647559,0.700837921786577,1.93684985162364,1.267098499365,3.04283884218592,0.171217968225505,0.0797721589953364,1.36960583944965,1.22388563386596,0.999329285446988,0.607425802169478,0,0.157731082679119,0.274228867211478,0.42438965179803,0,0.496454756004426,0.522399578277871,0.319984845586813,0.22940928106717,3.44539178469012,0.430761996159075,0.646413698057667,0.380046838912748,0.252030129759931,0.665191531965914,1.27006134691926,0,0,2.59966457776147,0.664938581433969,1.83752420636132,5.02237956884289,3.906676722619,2.61761871986899,13.5293242247133,8.19654581950135,2.42755176515577,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.439372365468944,0.777719596297134,0.279972843250725,0,0.671130424230945,2.17608642603403,0.336093799142464,0,0.286533439938757,0,0.202316460859598,0,0,0.677689064138264,1.77858959222228,0,0,0.7104801149461,0.599200221036809,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0,0,2.89864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0,0.301445281105245,0,0,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0.239630249011841,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.497627882440372,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0,0,0.330418782983798,1.05780226665418,0,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0.432276099749388,0.597423819763102,0.379335801906163,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0.482354319504834,0.25462585178142,0.575392274901621,0.324270453550071,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0.433947175744535,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0.477937595905104,1.78238939265915,0.566153061577665,0.404810701674894,1.16902343164525,1.18586333383957,0.642642632843614,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,1.05418608574999,1.03135543248187,0.340439605753788,0,0.517434735131018,0.428674070063185,0,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0,0.49465875882444,0.161464426695906,0.180938774784468,0.119372344003136,0,0.582961673259701,0,0.341741761595705,0.206386867963223,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0.258319646955462,0.168956125490778,0.352071715937262,0.2604087696879,0.209718688851422,0.241584120826006,0,0.316011120628178,0.405450430580328,0,0.129920822977795,0,0.39736270956253,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.288635524920988,0.584384510907845,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0,0.399024873401031,0,0,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr6:86619601..86619640,+ | |||
}} |
Revision as of 10:51, 14 September 2013
Short description: | p@chr6:86619601..86619640, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:86619601..86619640, + |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.62e-12 | 9 |
gastrointestinal system epithelium | 1.62e-12 | 9 |
intestinal epithelium | 1.62e-12 | 9 |
simple columnar epithelium | 4.06e-10 | 11 |
intestinal mucosa | 1.87e-08 | 13 |
wall of intestine | 1.87e-08 | 13 |
gastrointestinal system mucosa | 1.87e-08 | 13 |
mucosa | 3.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.11e-10 | 3 |
muscle cancer | 2.11e-10 | 3 |
organ system cancer | 1.25e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.