FFCP PHASE1:Mm9::chr7:15031858..15031865,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76971|HGNC=|MCL_coexpression_id=73|UniProt=B1PQU4|association_with_transcript=67bp_to_ENSMUST00000166522_5end|description=CAGE_peak_4_at_2810007J24Rik_5end|id=chr7:15031858..15031865,-|ontology_enrichment_celltype=CL:0000181!9.65e-29!5;CL:0000417!9.65e-29!5;CL:0000668!9.65e-29!5;CL:0000412!9.65e-29!5;CL:0000182!9.65e-29!5;CL:0000414!2.62e-13!11;CL:0000057!2.01e-10!1;CL:0000632!2.01e-10!1;CL:0000223!1.85e-07!20|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-35,5;CL:0000057,1.55e-12,1;CL:0000632,1.55e-12,1;CL:0000223,3.28e-09,20;CL:0000066,1.94e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.21e-19!22;UBERON:0007499!2.21e-19!22;UBERON:0006925!2.21e-19!22;UBERON:0009497!2.21e-19!22;UBERON:0000015!2.21e-19!22;UBERON:0002423!2.21e-19!22;UBERON:0006235!2.21e-19!22;UBERON:0008835!2.21e-19!22;UBERON:0003894!2.21e-19!22;UBERON:0004161!2.21e-19!22;UBERON:0008836!2.21e-19!22;UBERON:0009854!1.56e-18!23;UBERON:0009856!1.56e-18!23;UBERON:0002365!4.90e-17!25;UBERON:0002330!4.90e-17!25;UBERON:0005256!1.42e-11!47;UBERON:0005172!4.39e-11!49;UBERON:0005173!4.39e-11!49;UBERON:0002417!4.39e-11!49;UBERON:0000916!4.39e-11!49;UBERON:0002368!5.70e-09!60;UBERON:0003914!6.16e-09!47;UBERON:0002530!3.04e-08!65;UBERON:0005057!3.29e-08!51;UBERON:0009569!4.12e-08!66;UBERON:0003929!1.38e-07!55;UBERON:0000949!2.15e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.44e-18,22;UBERON:0007499,5.44e-18,22;UBERON:0006925,5.44e-18,22;UBERON:0009497,5.44e-18,22;UBERON:0000015,5.44e-18,22;UBERON:0002423,5.44e-18,22;UBERON:0006235,5.44e-18,22;UBERON:0008835,5.44e-18,22;UBERON:0003894,5.44e-18,22;UBERON:0004161,5.44e-18,22;UBERON:0008836,5.44e-18,22;UBERON:0009854,3.24e-17,23;UBERON:0009856,3.24e-17,23;UBERON:0002365,7.49e-16,25;UBERON:0002330,7.49e-16,25;UBERON:0005256,7.68e-09,45;UBERON:0003914,1.83e-08,47;UBERON:0005172,4.05e-08,49;UBERON:0005173,4.05e-08,49;UBERON:0002417,4.05e-08,49;UBERON:0000916,4.05e-08,49;UBERON:0003929,3.13e-07,55|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.487629785665,4.0798280022465,26.445456390253,8.4470934268197,13.8888335000174,10.9546647702766,0,0,0,0,0,0,0,0,0,0,8.67797485864856,0,0.445326417194474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717589654087649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@2810007J24Rik}} | ||
|EntrezGene=76971 | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|UniProt=B1PQU4 | |||
|association_with_transcript=67bp_to_ENSMUST00000166522_5end | |||
|description=CAGE_peak_4_at_2810007J24Rik_5end | |||
|id=chr7:15031858..15031865,- | |||
|ontology_enrichment_celltype=CL:0000181!9.65e-29!5;CL:0000417!9.65e-29!5;CL:0000668!9.65e-29!5;CL:0000412!9.65e-29!5;CL:0000182!9.65e-29!5;CL:0000414!2.62e-13!11;CL:0000057!2.01e-10!1;CL:0000632!2.01e-10!1;CL:0000223!1.85e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-35,5;CL:0000057,1.55e-12,1;CL:0000632,1.55e-12,1;CL:0000223,3.28e-09,20;CL:0000066,1.94e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.21e-19!22;UBERON:0007499!2.21e-19!22;UBERON:0006925!2.21e-19!22;UBERON:0009497!2.21e-19!22;UBERON:0000015!2.21e-19!22;UBERON:0002423!2.21e-19!22;UBERON:0006235!2.21e-19!22;UBERON:0008835!2.21e-19!22;UBERON:0003894!2.21e-19!22;UBERON:0004161!2.21e-19!22;UBERON:0008836!2.21e-19!22;UBERON:0009854!1.56e-18!23;UBERON:0009856!1.56e-18!23;UBERON:0002365!4.90e-17!25;UBERON:0002330!4.90e-17!25;UBERON:0005256!1.42e-11!47;UBERON:0005172!4.39e-11!49;UBERON:0005173!4.39e-11!49;UBERON:0002417!4.39e-11!49;UBERON:0000916!4.39e-11!49;UBERON:0002368!5.70e-09!60;UBERON:0003914!6.16e-09!47;UBERON:0002530!3.04e-08!65;UBERON:0005057!3.29e-08!51;UBERON:0009569!4.12e-08!66;UBERON:0003929!1.38e-07!55;UBERON:0000949!2.15e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.44e-18,22;UBERON:0007499,5.44e-18,22;UBERON:0006925,5.44e-18,22;UBERON:0009497,5.44e-18,22;UBERON:0000015,5.44e-18,22;UBERON:0002423,5.44e-18,22;UBERON:0006235,5.44e-18,22;UBERON:0008835,5.44e-18,22;UBERON:0003894,5.44e-18,22;UBERON:0004161,5.44e-18,22;UBERON:0008836,5.44e-18,22;UBERON:0009854,3.24e-17,23;UBERON:0009856,3.24e-17,23;UBERON:0002365,7.49e-16,25;UBERON:0002330,7.49e-16,25;UBERON:0005256,7.68e-09,45;UBERON:0003914,1.83e-08,47;UBERON:0005172,4.05e-08,49;UBERON:0005173,4.05e-08,49;UBERON:0002417,4.05e-08,49;UBERON:0000916,4.05e-08,49;UBERON:0003929,3.13e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.487629785665,4.0798280022465,26.445456390253,8.4470934268197,13.8888335000174,10.9546647702766,0,0,0,0,0,0,0,0,0,0,8.67797485864856,0,0.445326417194474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717589654087649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@2810007J24Rik | |||
}} |
Revision as of 12:28, 14 September 2013
Short description: | p4@2810007J24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2810007J24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | 67bp_to_ENSMUST00000166522_5end |
EntrezGene: | 2810007J24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.40e-35 | 5 |
fibroblast | 1.55e-12 | 1 |
hepatic stellate cell | 1.55e-12 | 1 |
endodermal cell | 3.28e-09 | 20 |
epithelial cell | 1.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 5.44e-18 | 22 |
epithelial sac | 5.44e-18 | 22 |
digestive gland | 5.44e-18 | 22 |
epithelium of foregut-midgut junction | 5.44e-18 | 22 |
anatomical boundary | 5.44e-18 | 22 |
hepatobiliary system | 5.44e-18 | 22 |
foregut-midgut junction | 5.44e-18 | 22 |
hepatic diverticulum | 5.44e-18 | 22 |
liver primordium | 5.44e-18 | 22 |
septum transversum | 5.44e-18 | 22 |
liver bud | 5.44e-18 | 22 |
digestive tract diverticulum | 3.24e-17 | 23 |
sac | 3.24e-17 | 23 |
exocrine gland | 7.49e-16 | 25 |
exocrine system | 7.49e-16 | 25 |
trunk mesenchyme | 7.68e-09 | 45 |
epithelial tube | 1.83e-08 | 47 |
abdomen element | 4.05e-08 | 49 |
abdominal segment element | 4.05e-08 | 49 |
abdominal segment of trunk | 4.05e-08 | 49 |
abdomen | 4.05e-08 | 49 |
gut epithelium | 3.13e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.