FFCP PHASE1:Hg19::chrY:58884631..58884640,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=NA|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C390|description=CAGE_peak_at_chrY:58884631..58884640,+|id=chrY:58884631..58884640,+|ontology_enrichment_celltype=CL:0000214!1.44e-12!3;CL:0002557!2.26e-09!1;CL:0000153!4.31e-09!9;CL:0000447!4.31e-09!9;CL:0000540!9.74e-07!6;CL:0000031!9.74e-07!6;CL:0000404!9.74e-07!6|ontology_enrichment_celltype_v019=CL:0000214;1.36e-44;3!CL:0000540;4.11e-23;6!CL:0000404;4.11e-23;6!CL:0002600;1.07e-17;2!CL:0000153;1.17e-15;9!CL:0000447;1.17e-15;9!CL:0000327;8.28e-10;15|ontology_enrichment_celltype_v019_2=CL:0000214,1.22e-44,3;CL:0000540,4.34e-23,6;CL:0000031,4.34e-23,6;CL:0000404,4.34e-23,6;CL:0002600,1.27e-17,2;CL:0000047,1.33e-17,8;CL:0000153,1.13e-15,9;CL:0000447,1.13e-15,9;CL:0000327,8.10e-10,15|ontology_enrichment_development_v019=CL:0000031;4.11e-23;6!UBERON:0005062;1.57e-09;4!UBERON:0007284;1.57e-09;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006915!1.44e-12!3;UBERON:0002018!1.44e-12!3;UBERON:0002217!1.44e-12!3;UBERON:0007616!1.44e-12!3;UBERON:0003978!1.81e-12!3;UBERON:0009751!1.81e-12!3;UBERON:0000946!1.81e-12!3;UBERON:0002523!1.81e-12!3;UBERON:0005983!1.81e-12!3;UBERON:0002165!1.81e-12!3;UBERON:0002062!1.81e-12!3;UBERON:0007280!1.81e-12!3;UBERON:0004145!4.99e-12!3;UBERON:0002146!4.87e-10!1;UBERON:0005623!4.87e-10!1;UBERON:0002134!6.31e-10!1;UBERON:0005208!6.31e-10!1;UBERON:0005946!6.31e-10!1;UBERON:0005965!6.31e-10!1;UBERON:0002078!6.31e-10!1;UBERON:0000989!8.91e-10!1;UBERON:0008811!8.91e-10!1;UBERON:0006258!8.91e-10!1;UBERON:0005876!8.91e-10!1;UBERON:0004874!8.91e-10!1;UBERON:0001000!1.15e-09!1;UBERON:0005352!1.15e-09!1;UBERON:0004905!6.97e-08!5;UBERON:0000982!6.97e-08!5;UBERON:0004770!6.97e-08!5|ontology_enrichment_uberon_v019=UBERON:0006915;1.36e-44;3!UBERON:0007616;1.36e-44;3!UBERON:0002217;1.36e-44;3!UBERON:0002018;1.36e-44;3!UBERON:0002146;7.05e-34;1!UBERON:0005623;7.05e-34;1!UBERON:0004905;1.78e-17;8!UBERON:0000982;1.78e-17;8!UBERON:0004770;1.78e-17;8!UBERON:0004457;1.17e-15;9!UBERON:0000042;1.17e-15;9!UBERON:0003978;2.89e-12;3!UBERON:0000946;2.89e-12;3!UBERON:0000486;5.22e-12;12|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.22e-44,3;UBERON:0007616,1.22e-44,3;UBERON:0002217,1.22e-44,3;UBERON:0002018,1.22e-44,3;UBERON:0002146,5.05e-34,1;UBERON:0005623,5.05e-34,1;UBERON:0004905,1.71e-17,8;UBERON:0000982,1.71e-17,8;UBERON:0004770,1.71e-17,8;UBERON:0003978,2.59e-12,3;UBERON:0009751,2.59e-12,3;UBERON:0000946,2.59e-12,3;UBERON:0002523,2.59e-12,3;UBERON:0005983,2.59e-12,3;UBERON:0002165,2.59e-12,3;UBERON:0002062,2.59e-12,3;UBERON:0007280,2.59e-12,3;UBERON:0004457,5.08e-12,12;UBERON:0000042,5.08e-12,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637812899895131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09315525111078,0,27.431366321086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0.430234056612155,0,0,0,3.16661452946496,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83328339209347,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrY:58884631..58884640,+}} | ||
|EntrezGene=NA | |||
|HGNC=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C390 | |||
|description=CAGE_peak_at_chrY:58884631..58884640,+ | |||
|id=chrY:58884631..58884640,+ | |||
|ontology_enrichment_celltype=CL:0000214!1.44e-12!3;CL:0002557!2.26e-09!1;CL:0000153!4.31e-09!9;CL:0000447!4.31e-09!9;CL:0000540!9.74e-07!6;CL:0000031!9.74e-07!6;CL:0000404!9.74e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.36e-44;3!CL:0000540;4.11e-23;6!CL:0000404;4.11e-23;6!CL:0002600;1.07e-17;2!CL:0000153;1.17e-15;9!CL:0000447;1.17e-15;9!CL:0000327;8.28e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.22e-44,3;CL:0000540,4.34e-23,6;CL:0000031,4.34e-23,6;CL:0000404,4.34e-23,6;CL:0002600,1.27e-17,2;CL:0000047,1.33e-17,8;CL:0000153,1.13e-15,9;CL:0000447,1.13e-15,9;CL:0000327,8.10e-10,15 | |||
|ontology_enrichment_development_v019=CL:0000031;4.11e-23;6!UBERON:0005062;1.57e-09;4!UBERON:0007284;1.57e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!1.44e-12!3;UBERON:0002018!1.44e-12!3;UBERON:0002217!1.44e-12!3;UBERON:0007616!1.44e-12!3;UBERON:0003978!1.81e-12!3;UBERON:0009751!1.81e-12!3;UBERON:0000946!1.81e-12!3;UBERON:0002523!1.81e-12!3;UBERON:0005983!1.81e-12!3;UBERON:0002165!1.81e-12!3;UBERON:0002062!1.81e-12!3;UBERON:0007280!1.81e-12!3;UBERON:0004145!4.99e-12!3;UBERON:0002146!4.87e-10!1;UBERON:0005623!4.87e-10!1;UBERON:0002134!6.31e-10!1;UBERON:0005208!6.31e-10!1;UBERON:0005946!6.31e-10!1;UBERON:0005965!6.31e-10!1;UBERON:0002078!6.31e-10!1;UBERON:0000989!8.91e-10!1;UBERON:0008811!8.91e-10!1;UBERON:0006258!8.91e-10!1;UBERON:0005876!8.91e-10!1;UBERON:0004874!8.91e-10!1;UBERON:0001000!1.15e-09!1;UBERON:0005352!1.15e-09!1;UBERON:0004905!6.97e-08!5;UBERON:0000982!6.97e-08!5;UBERON:0004770!6.97e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.36e-44;3!UBERON:0007616;1.36e-44;3!UBERON:0002217;1.36e-44;3!UBERON:0002018;1.36e-44;3!UBERON:0002146;7.05e-34;1!UBERON:0005623;7.05e-34;1!UBERON:0004905;1.78e-17;8!UBERON:0000982;1.78e-17;8!UBERON:0004770;1.78e-17;8!UBERON:0004457;1.17e-15;9!UBERON:0000042;1.17e-15;9!UBERON:0003978;2.89e-12;3!UBERON:0000946;2.89e-12;3!UBERON:0000486;5.22e-12;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.22e-44,3;UBERON:0007616,1.22e-44,3;UBERON:0002217,1.22e-44,3;UBERON:0002018,1.22e-44,3;UBERON:0002146,5.05e-34,1;UBERON:0005623,5.05e-34,1;UBERON:0004905,1.71e-17,8;UBERON:0000982,1.71e-17,8;UBERON:0004770,1.71e-17,8;UBERON:0003978,2.59e-12,3;UBERON:0009751,2.59e-12,3;UBERON:0000946,2.59e-12,3;UBERON:0002523,2.59e-12,3;UBERON:0005983,2.59e-12,3;UBERON:0002165,2.59e-12,3;UBERON:0002062,2.59e-12,3;UBERON:0007280,2.59e-12,3;UBERON:0004457,5.08e-12,12;UBERON:0000042,5.08e-12,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637812899895131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09315525111078,0,27.431366321086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0.430234056612155,0,0,0,3.16661452946496,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83328339209347,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrY:58884631..58884640,+ | |||
}} |
Revision as of 12:47, 14 September 2013
Short description: | p@chrY:58884631..58884640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrY:58884631..58884640, + |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.22e-44 | 3 |
neuron | 4.34e-23 | 6 |
neuroblast | 4.34e-23 | 6 |
electrically signaling cell | 4.34e-23 | 6 |
smooth muscle cell of trachea | 1.27e-17 | 2 |
neuronal stem cell | 1.33e-17 | 8 |
GAG secreting cell | 1.13e-15 | 9 |
carbohydrate secreting cell | 1.13e-15 | 9 |
extracellular matrix secreting cell | 8.10e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.22e-44 | 3 |
layer of synovial tissue | 1.22e-44 | 3 |
synovial joint | 1.22e-44 | 3 |
synovial membrane of synovial joint | 1.22e-44 | 3 |
pulmonary valve | 5.05e-34 | 1 |
semi-lunar valve | 5.05e-34 | 1 |
articulation | 1.71e-17 | 8 |
skeletal joint | 1.71e-17 | 8 |
articular system | 1.71e-17 | 8 |
valve | 2.59e-12 | 3 |
cardiac mesenchyme | 2.59e-12 | 3 |
cardial valve | 2.59e-12 | 3 |
tunica intima | 2.59e-12 | 3 |
heart layer | 2.59e-12 | 3 |
endocardium | 2.59e-12 | 3 |
endocardial cushion | 2.59e-12 | 3 |
presumptive endocardium | 2.59e-12 | 3 |
cavity lining | 5.08e-12 | 12 |
serous membrane | 5.08e-12 | 12 |
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.