FFCP PHASE1:Mm9::chr7:52972437..52972463,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=86|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:52972437..52972463,-|id=chr7:52972437..52972463,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,2.01e-17,7;CL:0000049,1.96e-11,19;CL:0002194,4.87e-11,4;CL:0000766,4.87e-11,4;CL:0000234,4.87e-11,4;CL:0000576,4.87e-11,4;CL:0000235,4.87e-11,4;CL:0000864,4.87e-11,4;CL:0002009,4.87e-11,4;CL:0000040,4.87e-11,4;CL:0000559,4.87e-11,4;CL:0002092,7.05e-09,3;CL:0002540,7.05e-09,3;CL:0000763,5.68e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-08,3;DOID:4045,1.75e-08,3|ontology_enrichment_uberon=UBERON:0002204!1.82e-09!32;UBERON:0001474!4.25e-07!22;UBERON:0004765!4.25e-07!22;UBERON:0001434!4.25e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.03e-18,32;UBERON:0002371,1.25e-14,16;UBERON:0001474,2.91e-14,22;UBERON:0004765,2.91e-14,22;UBERON:0001434,2.91e-14,22;UBERON:0000926,1.41e-07,120;UBERON:0004120,1.41e-07,120;UBERON:0006603,1.41e-07,120|phase1_expression=0,0.697950815278722,0,0,0,0.16787927191189,0.700837921786577,0,0,0.234064526321993,0.34243593645101,0,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,16.7412652294763,5.4693474116666,8.89990364755457,13.5293242247133,10.9287277593351,4.85510353031154,0,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0,0,26.996991518442,37.576921777545,30.5506449426823,12.583204641773,4.61061966385865,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.454357159999104,0.151143120213571,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.6251303710604,1.1875371125186,0,1.52232739156071,1.61430848079241,1.50722640552623,0.470354828542819,0.879666139307728,0.247194967734374,0.578397427679647,0.884610551949874,0.647067399789637,1.54589062922275,1.45462575940567,0,0,0.209446706813455,0,3.23500836165985,3.59941638596045,3.43089613097275,0,0,0.125654352112864,0.173824320192276,0,0,0,0.305518091550949,1.49288364732112,0.252722758433675,1.47309299120532,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,1.02891068203972,0,3.51106593656617,3.86021860672073,4.26245249093389,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.402619256281115,0,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.72353147925725,0,0,1.13494658742525,0,0,1.48856379067401,0,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0,0,0.335012514883631,0,0.780534591431195,0.157635144106191,0.44292937929755,0.797273843287435,0.327726629431476,0.345369963731791,0.578596234326046,33.1740824666399,96.2713060359116,0.983528546038072,0.827810238914197,0,0,0,1.00988370881749,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0.824850614862677,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0,0,0,0,0,0.304464949114599,1.17335854031855,0.21183207086382,0,0.49465875882444,0.322928853391811,0.965006798850494,0.238744688006273,0.328281799490123,0,0.18542530201051,0.683483523191411,0.619160603889667,1.85194527369712,0,0.683471138605126,0.686334519619568,0.339956859987711,0.419854356970974,0.138199973804424,1.90934123603023,0.158167996790568,0.203319467126849,0.648032044930808,0.836353184057875,0.655087691238533,0.404593039154462,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0,0.352071715937262,0.13020438484395,0.209718688851422,0,0,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0.384847366561318,0.467507608726276,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.19318959403219,1.87682475451182,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.824140228955577,0,0.505394423527595,0.50695859978048,0,0.280924522409647,0.128050304809739,0.287177344778066,0,0.115884325944855,0,0.824171801606613,0,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.423073039458382,0,0,0.135804113845862,1.12228454331548,0.474540072496697,0,0,0.309873682371932,0,0.749431733813838,0.467863216890817,0.859484216193193,0.57386499620653,0.661774257358546,0.927471342481686|short_description=p@chr7:52972437..52972463,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:52972437..52972463,- | |||
|id=chr7:52972437..52972463,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.01e-17,7;CL:0000049,1.96e-11,19;CL:0002194,4.87e-11,4;CL:0000766,4.87e-11,4;CL:0000234,4.87e-11,4;CL:0000576,4.87e-11,4;CL:0000235,4.87e-11,4;CL:0000864,4.87e-11,4;CL:0002009,4.87e-11,4;CL:0000040,4.87e-11,4;CL:0000559,4.87e-11,4;CL:0002092,7.05e-09,3;CL:0002540,7.05e-09,3;CL:0000763,5.68e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-08,3;DOID:4045,1.75e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.82e-09!32;UBERON:0001474!4.25e-07!22;UBERON:0004765!4.25e-07!22;UBERON:0001434!4.25e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.03e-18,32;UBERON:0002371,1.25e-14,16;UBERON:0001474,2.91e-14,22;UBERON:0004765,2.91e-14,22;UBERON:0001434,2.91e-14,22;UBERON:0000926,1.41e-07,120;UBERON:0004120,1.41e-07,120;UBERON:0006603,1.41e-07,120 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0.16787927191189,0.700837921786577,0,0,0.234064526321993,0.34243593645101,0,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,16.7412652294763,5.4693474116666,8.89990364755457,13.5293242247133,10.9287277593351,4.85510353031154,0,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0,0,26.996991518442,37.576921777545,30.5506449426823,12.583204641773,4.61061966385865,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.454357159999104,0.151143120213571,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.6251303710604,1.1875371125186,0,1.52232739156071,1.61430848079241,1.50722640552623,0.470354828542819,0.879666139307728,0.247194967734374,0.578397427679647,0.884610551949874,0.647067399789637,1.54589062922275,1.45462575940567,0,0,0.209446706813455,0,3.23500836165985,3.59941638596045,3.43089613097275,0,0,0.125654352112864,0.173824320192276,0,0,0,0.305518091550949,1.49288364732112,0.252722758433675,1.47309299120532,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,1.02891068203972,0,3.51106593656617,3.86021860672073,4.26245249093389,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.402619256281115,0,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.72353147925725,0,0,1.13494658742525,0,0,1.48856379067401,0,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0,0,0.335012514883631,0,0.780534591431195,0.157635144106191,0.44292937929755,0.797273843287435,0.327726629431476,0.345369963731791,0.578596234326046,33.1740824666399,96.2713060359116,0.983528546038072,0.827810238914197,0,0,0,1.00988370881749,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0.824850614862677,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0,0,0,0,0,0.304464949114599,1.17335854031855,0.21183207086382,0,0.49465875882444,0.322928853391811,0.965006798850494,0.238744688006273,0.328281799490123,0,0.18542530201051,0.683483523191411,0.619160603889667,1.85194527369712,0,0.683471138605126,0.686334519619568,0.339956859987711,0.419854356970974,0.138199973804424,1.90934123603023,0.158167996790568,0.203319467126849,0.648032044930808,0.836353184057875,0.655087691238533,0.404593039154462,0.41326727862668,0.26175594198403,0.129614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0,0.352071715937262,0.13020438484395,0.209718688851422,0,0,0,0,0,0.25984164595559,0,0,0,0.147689527174577,0.302899349844443,0.15241361331,0.100826185136841,0.0974578807397524,0.384847366561318,0.467507608726276,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.19318959403219,1.87682475451182,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.824140228955577,0,0.505394423527595,0.50695859978048,0,0.280924522409647,0.128050304809739,0.287177344778066,0,0.115884325944855,0,0.824171801606613,0,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.423073039458382,0,0,0.135804113845862,1.12228454331548,0.474540072496697,0,0,0.309873682371932,0,0.749431733813838,0.467863216890817,0.859484216193193,0.57386499620653,0.661774257358546,0.927471342481686 | |||
|short_description=p@chr7:52972437..52972463,- | |||
}} |
Revision as of 13:48, 14 September 2013
Short description: | p@chr7:52972437..52972463, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:52972437..52972463, - |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.01e-17 | 7 |
common myeloid progenitor | 1.96e-11 | 19 |
monopoietic cell | 4.87e-11 | 4 |
myeloid leukocyte | 4.87e-11 | 4 |
phagocyte | 4.87e-11 | 4 |
monocyte | 4.87e-11 | 4 |
macrophage | 4.87e-11 | 4 |
tissue-resident macrophage | 4.87e-11 | 4 |
macrophage dendritic cell progenitor | 4.87e-11 | 4 |
monoblast | 4.87e-11 | 4 |
promonocyte | 4.87e-11 | 4 |
bone marrow cell | 7.05e-09 | 3 |
mesenchymal stem cell of the bone marrow | 7.05e-09 | 3 |
myeloid cell | 5.68e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.03e-18 | 32 |
bone marrow | 1.25e-14 | 16 |
bone element | 2.91e-14 | 22 |
skeletal element | 2.91e-14 | 22 |
skeletal system | 2.91e-14 | 22 |
mesoderm | 1.41e-07 | 120 |
mesoderm-derived structure | 1.41e-07 | 120 |
presumptive mesoderm | 1.41e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.75e-08 | 3 |
muscle cancer | 1.75e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.