FFCP PHASE1:Mm9::chr8:72520015..72520053,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=234366|HGNC=|UniProt=E9QMN5,Q8CHY6|association_with_transcript=224bp_to_ENSMUST00000065169,NM_001113345,NM_145596,uc009lyg.2,uc009lyh.2,uc009lyi.2_5end|description=CAGE_peak_2_at_Gatad2a_5end|id=chr8:72520015..72520053,-|ontology_enrichment_celltype=CL:0002031!5.27e-07!25;CL:0000988!7.15e-07!32;CL:0002032!7.15e-07!32;CL:0000037!7.15e-07!32;CL:0000566!7.15e-07!32;CL:0000837!7.15e-07!32|ontology_enrichment_celltype_v019_2=CL:0002031,5.27e-07,25;CL:0000988,7.15e-07,32;CL:0002032,7.15e-07,32;CL:0000037,7.15e-07,32;CL:0000837,7.15e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.69e-17!130;UBERON:0000925!4.69e-17!130;UBERON:0006595!4.69e-17!130;UBERON:0001007!5.25e-17!128;UBERON:0001555!5.25e-17!128;UBERON:0007026!5.25e-17!128;UBERON:0004921!1.44e-16!126;UBERON:0004185!1.44e-16!126;UBERON:0005911!2.05e-11!69;UBERON:0004177!1.97e-10!29;UBERON:0002405!2.14e-10!70;UBERON:0003929!4.84e-10!55;UBERON:0002193!5.15e-10!48;UBERON:0005057!8.40e-10!51;UBERON:0002390!2.11e-09!45;UBERON:0003061!2.11e-09!45;UBERON:0002368!3.27e-09!60;UBERON:0002370!5.35e-09!23;UBERON:0000974!5.35e-09!23;UBERON:0004807!5.35e-09!23;UBERON:0005058!5.35e-09!23;UBERON:0003351!5.35e-09!23;UBERON:0009113!5.35e-09!23;UBERON:0003295!5.35e-09!23;UBERON:0009722!5.35e-09!23;UBERON:0005562!5.35e-09!23;UBERON:0007690!5.35e-09!23;UBERON:0000065!6.25e-09!41;UBERON:0001004!1.31e-08!42;UBERON:0001041!1.36e-08!92;UBERON:0003408!1.69e-08!24;UBERON:0000077!3.12e-08!97;UBERON:0000072!4.66e-08!27;UBERON:0006562!5.09e-08!24;UBERON:0001557!5.09e-08!24;UBERON:0001042!5.09e-08!24;UBERON:0008814!5.09e-08!24;UBERON:0009145!5.09e-08!24;UBERON:0002530!1.18e-07!65;UBERON:0000949!2.03e-07!72;UBERON:0005409!5.22e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.28e-19,118;UBERON:0000925,6.28e-19,118;UBERON:0006595,6.28e-19,118;UBERON:0001007,6.52e-19,116;UBERON:0001555,6.52e-19,116;UBERON:0007026,6.52e-19,116;UBERON:0004921,1.79e-18,114;UBERON:0005911,2.02e-11,69;UBERON:0004177,1.93e-10,29;UBERON:0005057,1.93e-10,29;UBERON:0001041,3.57e-10,80;UBERON:0003929,4.78e-10,55;UBERON:0002193,5.08e-10,48;UBERON:0002405,5.08e-10,48;UBERON:0002390,2.08e-09,45;UBERON:0003061,2.08e-09,45;UBERON:0000077,2.46e-09,35;UBERON:0002368,3.23e-09,60;UBERON:0005409,4.03e-09,47;UBERON:0002370,5.26e-09,23;UBERON:0000974,5.26e-09,23;UBERON:0004807,5.26e-09,23;UBERON:0005058,5.26e-09,23;UBERON:0003351,5.26e-09,23;UBERON:0009113,5.26e-09,23;UBERON:0003295,5.26e-09,23;UBERON:0009722,5.26e-09,23;UBERON:0005562,5.26e-09,23;UBERON:0007690,5.26e-09,23;UBERON:0000065,6.17e-09,41;UBERON:0001004,1.29e-08,42;UBERON:0000160,1.31e-08,31;UBERON:0003408,1.66e-08,24;UBERON:0000072,4.59e-08,27;UBERON:0006562,5.01e-08,24;UBERON:0001557,5.01e-08,24;UBERON:0001042,5.01e-08,24;UBERON:0008814,5.01e-08,24;UBERON:0009145,5.01e-08,24;UBERON:0002530,1.17e-07,65;UBERON:0000949,2.01e-07,72|phase1_expression=4.32401887182944,10.8182376368202,12.739978702907,11.1911758183527,15.5277676283368,9.9048770428015,7.70921713965235,9.55512593467664,8.869689495555,11.9372908424217,2.56826952338257,5.42450681168288,11.9840510951844,12.6759583507546,11.3257319017325,6.2767332890846,4.19737126876888,10.567982539501,11.7918412900935,10.6097412949508,6.03807360072595,9.63122226648587,11.7539905112521,6.87967418011649,7.57050627521661,12.0588712464154,9.47676391549965,7.32602191132023,7.41091335879858,8.06496415231778,4.8780712344167,27.9413496322238,25.2176562909674,15.8481681015439,4.04392267651784,7.14808975041517,7.75843553797003,3.76678467663217,3.906676722619,2.09409497589519,2.94115744015507,2.04913645487534,0.971020706062307,1.38486499773135,1.82478476195126,1.46837401729345,4.69434806608824,3.2703773457067,2.19686182734472,4.6663175777828,3.07970127575798,4.31257693094915,7.88578248471361,15.2326049822382,23.19047214083,3.08711323243136,2.29226751951005,2.57836046138721,2.83243045203437,3.1739458756322,5.07065122804943,4.06613438482959,4.4464739805557,3.1496490104849,1.97773272513395,4.2628806896766,5.09320187881288,6.14749288514487,3.11068836925433,2.70011876663381,3.15487442027073,2.85650984403804,3.09215957332259,2.9397791811589,3.45043695665651,2.75765635983006,5.50579404996943,1.53224805702225,2.15049146558741,1.84640802822271,2.37867873366265,1.56274011167028,3.07101298901519,2.8138130501584,1.22238598221448,2.65165726926301,3.27454865837937,2.79599168737951,2.19605960666234,2.87171928405785,8.11620568364698,5.16254326188832,9.51959867190851,4.31762553310254,5.19821133958135,5.37632264516803,4.35377702408431,1.02258193546835,1.29893002301434,1.7666978725517,3.09855523508697,0,5.09610479413291,14.2213340630666,6.92771331235885,7.34743609877786,5.56076889516262,4.45317130904334,8.80388804400384,6.08612770165782,8.15381035800839,7.30717147949139,9.4552353874984,6.33035090321015,8.11362079236363,6.40899615781345,5.93267922562497,2.31358971071859,7.07688441559899,4.85300549842228,5.74187947997023,7.75800405016355,3.72783522436244,3.513369564138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| ||
|EntrezGene=234366 | |||
|HGNC= | |||
|UniProt=E9QMN5,Q8CHY6 | |||
|association_with_transcript=224bp_to_ENSMUST00000065169,NM_001113345,NM_145596,uc009lyg.2,uc009lyh.2,uc009lyi.2_5end | |||
|description=CAGE_peak_2_at_Gatad2a_5end | |||
|id=chr8:72520015..72520053,- | |||
|ontology_enrichment_celltype=CL:0002031!5.27e-07!25;CL:0000988!7.15e-07!32;CL:0002032!7.15e-07!32;CL:0000037!7.15e-07!32;CL:0000566!7.15e-07!32;CL:0000837!7.15e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.27e-07,25;CL:0000988,7.15e-07,32;CL:0002032,7.15e-07,32;CL:0000037,7.15e-07,32;CL:0000837,7.15e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.69e-17!130;UBERON:0000925!4.69e-17!130;UBERON:0006595!4.69e-17!130;UBERON:0001007!5.25e-17!128;UBERON:0001555!5.25e-17!128;UBERON:0007026!5.25e-17!128;UBERON:0004921!1.44e-16!126;UBERON:0004185!1.44e-16!126;UBERON:0005911!2.05e-11!69;UBERON:0004177!1.97e-10!29;UBERON:0002405!2.14e-10!70;UBERON:0003929!4.84e-10!55;UBERON:0002193!5.15e-10!48;UBERON:0005057!8.40e-10!51;UBERON:0002390!2.11e-09!45;UBERON:0003061!2.11e-09!45;UBERON:0002368!3.27e-09!60;UBERON:0002370!5.35e-09!23;UBERON:0000974!5.35e-09!23;UBERON:0004807!5.35e-09!23;UBERON:0005058!5.35e-09!23;UBERON:0003351!5.35e-09!23;UBERON:0009113!5.35e-09!23;UBERON:0003295!5.35e-09!23;UBERON:0009722!5.35e-09!23;UBERON:0005562!5.35e-09!23;UBERON:0007690!5.35e-09!23;UBERON:0000065!6.25e-09!41;UBERON:0001004!1.31e-08!42;UBERON:0001041!1.36e-08!92;UBERON:0003408!1.69e-08!24;UBERON:0000077!3.12e-08!97;UBERON:0000072!4.66e-08!27;UBERON:0006562!5.09e-08!24;UBERON:0001557!5.09e-08!24;UBERON:0001042!5.09e-08!24;UBERON:0008814!5.09e-08!24;UBERON:0009145!5.09e-08!24;UBERON:0002530!1.18e-07!65;UBERON:0000949!2.03e-07!72;UBERON:0005409!5.22e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.28e-19,118;UBERON:0000925,6.28e-19,118;UBERON:0006595,6.28e-19,118;UBERON:0001007,6.52e-19,116;UBERON:0001555,6.52e-19,116;UBERON:0007026,6.52e-19,116;UBERON:0004921,1.79e-18,114;UBERON:0005911,2.02e-11,69;UBERON:0004177,1.93e-10,29;UBERON:0005057,1.93e-10,29;UBERON:0001041,3.57e-10,80;UBERON:0003929,4.78e-10,55;UBERON:0002193,5.08e-10,48;UBERON:0002405,5.08e-10,48;UBERON:0002390,2.08e-09,45;UBERON:0003061,2.08e-09,45;UBERON:0000077,2.46e-09,35;UBERON:0002368,3.23e-09,60;UBERON:0005409,4.03e-09,47;UBERON:0002370,5.26e-09,23;UBERON:0000974,5.26e-09,23;UBERON:0004807,5.26e-09,23;UBERON:0005058,5.26e-09,23;UBERON:0003351,5.26e-09,23;UBERON:0009113,5.26e-09,23;UBERON:0003295,5.26e-09,23;UBERON:0009722,5.26e-09,23;UBERON:0005562,5.26e-09,23;UBERON:0007690,5.26e-09,23;UBERON:0000065,6.17e-09,41;UBERON:0001004,1.29e-08,42;UBERON:0000160,1.31e-08,31;UBERON:0003408,1.66e-08,24;UBERON:0000072,4.59e-08,27;UBERON:0006562,5.01e-08,24;UBERON:0001557,5.01e-08,24;UBERON:0001042,5.01e-08,24;UBERON:0008814,5.01e-08,24;UBERON:0009145,5.01e-08,24;UBERON:0002530,1.17e-07,65;UBERON:0000949,2.01e-07,72 | |||
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| |||
|short_description=p2@Gatad2a | |||
}} |
Revision as of 15:55, 14 September 2013
Short description: | p2@Gatad2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gatad2a_5end |
Coexpression cluster: | NA |
Association with transcript: | 224bp_to_ENSMUST00000065169, NM_001113345, NM_145596, uc009lyg.2, uc009lyh.2, uc009lyi.2_5end |
EntrezGene: | Gatad2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 5.27e-07 | 25 |
hematopoietic cell | 7.15e-07 | 32 |
hematopoietic oligopotent progenitor cell | 7.15e-07 | 32 |
hematopoietic stem cell | 7.15e-07 | 32 |
hematopoietic multipotent progenitor cell | 7.15e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.