FFCP PHASE1:Hg19::chr1:46806383..46806450,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31802 | |||
|TSSclassifier=strong | |||
|UniProt=Q96CB9 | |||
|association_with_transcript=0bp_to_ENST00000474062,NM_199044,uc001cpr.1,uc009vyf.1,uc010omc.1_5end | |||
|description=CAGE_peak_2_at_NSUN4_5end | |||
|id=chr1:46806383..46806450,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.48e-18!182;CL:0000037!6.54e-18!172;CL:0000566!6.54e-18!172;CL:0002032!5.22e-16!165;CL:0000837!5.22e-16!165;CL:0000763!8.52e-14!112;CL:0000049!8.52e-14!112;CL:0000738!1.73e-12!140;CL:0000766!2.84e-09!76;CL:0002087!8.34e-09!119;CL:0002031!2.43e-08!124;CL:0000945!2.89e-08!24;CL:0000826!2.89e-08!24;CL:0000557!2.67e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.02e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.18e-18,177;CL:0000037,8.80e-18,168;CL:0002032,7.03e-16,161;CL:0000837,7.03e-16,161;CL:0000763,8.72e-14,108;CL:0000049,8.72e-14,108;CL:0000738,2.31e-12,136;CL:0000766,2.86e-09,72;CL:0002087,1.11e-08,115;CL:0000945,2.87e-08,24;CL:0000826,2.87e-08,24;CL:0002031,3.27e-08,120;CL:0000557,2.90e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.60e-09!51;DOID:0060083!5.60e-09!51;DOID:1240!3.27e-08!39;DOID:8692!2.00e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.29e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.57e-09,51;DOID:0060083,5.57e-09,51;DOID:1240,3.25e-08,39;DOID:8692,1.99e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.03e-08!102;UBERON:0003061!7.03e-08!102;UBERON:0001474!5.32e-07!86;UBERON:0002193!7.46e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.24e-08,98;UBERON:0003061,8.24e-08,98;UBERON:0001474,5.91e-07,82;UBERON:0002193,8.72e-07,108 | |||
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| |||
|short_description=p2@NSUN4 | |||
}} |
Revision as of 18:24, 10 January 2014
Short description: | p2@NSUN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NSUN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000474062, NM_199044, uc001cpr.1, uc009vyf.1, uc010omc.1_5end |
EntrezGene: | NSUN4 |
HGNC: | 31802 |
UniProt: | Q96CB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.18e-18 | 177 |
hematopoietic stem cell | 8.80e-18 | 168 |
hematopoietic oligopotent progenitor cell | 7.03e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.03e-16 | 161 |
myeloid cell | 8.72e-14 | 108 |
common myeloid progenitor | 8.72e-14 | 108 |
leukocyte | 2.31e-12 | 136 |
myeloid leukocyte | 2.86e-09 | 72 |
nongranular leukocyte | 1.11e-08 | 115 |
lymphocyte of B lineage | 2.87e-08 | 24 |
pro-B cell | 2.87e-08 | 24 |
hematopoietic lineage restricted progenitor cell | 3.27e-08 | 120 |
granulocyte monocyte progenitor cell | 2.90e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.24e-08 | 98 |
blood island | 8.24e-08 | 98 |
bone element | 5.91e-07 | 82 |
hemolymphoid system | 8.72e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.57e-09 | 51 |
immune system cancer | 5.57e-09 | 51 |
leukemia | 3.25e-08 | 39 |
myeloid leukemia | 1.99e-07 | 31 |