FFCP PHASE1:Hg19::chr1:46806452..46806496,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31802 | |||
|TSSclassifier=strong | |||
|UniProt=B4DHA4 | |||
|association_with_transcript=0bp_to_ENST00000307089,ENST00000469918,ENST00000486270,ENST00000536062_5end | |||
|description=CAGE_peak_1_at_NSUN4_5end | |||
|id=chr1:46806452..46806496,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.24e-13!182;CL:0000037!7.66e-12!172;CL:0000566!7.66e-12!172;CL:0002032!8.80e-10!165;CL:0000837!8.80e-10!165;CL:0000763!8.46e-08!112;CL:0000049!8.46e-08!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.30e-12,177;CL:0000037,8.45e-12,168;CL:0002032,9.87e-10,161;CL:0000837,9.87e-10,161;CL:0000763,8.82e-08,108;CL:0000049,8.82e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.24e-12!31;DOID:1240!1.24e-10!39;DOID:2531!1.89e-07!51;DOID:0060083!1.89e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.99e-11;31!DOID:1240;1.06e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.24e-12,31;DOID:1240,1.24e-10,39;DOID:2531,1.89e-07,51;DOID:0060083,1.89e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.85e-07!57;UBERON:0005068!3.85e-07!57;UBERON:0006241!3.85e-07!57;UBERON:0007135!3.85e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.48e-08,53;UBERON:0002616,7.48e-08,53;UBERON:0001049,1.16e-07,56;UBERON:0005068,1.16e-07,56;UBERON:0006241,1.16e-07,56;UBERON:0007135,1.16e-07,56 | |||
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| |||
|short_description=p1@NSUN4 | |||
}} |
Revision as of 18:24, 10 January 2014
Short description: | p1@NSUN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NSUN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000307089, ENST00000469918, ENST00000486270, ENST00000536062_5end |
EntrezGene: | NSUN4 |
HGNC: | 31802 |
UniProt: | B4DHA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.30e-12 | 177 |
hematopoietic stem cell | 8.45e-12 | 168 |
hematopoietic oligopotent progenitor cell | 9.87e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.87e-10 | 161 |
myeloid cell | 8.82e-08 | 108 |
common myeloid progenitor | 8.82e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.48e-08 | 53 |
regional part of brain | 7.48e-08 | 53 |
neural tube | 1.16e-07 | 56 |
neural rod | 1.16e-07 | 56 |
future spinal cord | 1.16e-07 | 56 |
neural keel | 1.16e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.24e-12 | 31 |
leukemia | 1.24e-10 | 39 |
hematologic cancer | 1.89e-07 | 51 |
immune system cancer | 1.89e-07 | 51 |