FFCP PHASE1:Hg19::chr1:51434357..51434388,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1031 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1789 | |||
|TSSclassifier=strong | |||
|UniProt=P42773,Q6ICV4 | |||
|association_with_transcript=0bp_to_ENST00000396148,NM_001262_5end | |||
|description=CAGE_peak_4_at_CDKN2C_5end | |||
|id=chr1:51434357..51434388,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.73e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.14e-29!235;DOID:14566!1.87e-28!239;DOID:0050686!4.59e-15!137;DOID:2531!3.14e-14!51;DOID:0060083!3.14e-14!51;DOID:0050687!6.02e-14!143;DOID:1240!6.30e-13!39;DOID:8692!7.24e-13!31;DOID:305!3.02e-08!106;DOID:1115!1.31e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.52e-16;31!DOID:1240;1.46e-13;39!DOID:2531;3.00e-12;51!DOID:0060083;3.00e-12;51!DOID:1115;1.53e-08;20 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.73e-32,235;DOID:14566,2.12e-30,239;DOID:2531,2.72e-18,51;DOID:0060083,2.72e-18,51;DOID:0050686,5.40e-17,137;DOID:1240,7.24e-17,39;DOID:8692,5.03e-16,31;DOID:0050687,1.33e-14,143;DOID:1115,4.89e-09,20;DOID:305,1.06e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.98e-07;9!UBERON:0001557;1.98e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.80e-07,9 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,1.0007329835313,0,0,5.06599756336621,0.631719873426831,2.08948502559871,0.491467873003018,0,1.74753097704138,1.05506791291381,0.618831764800233,0.331397375727916,0.672325146451775,0,0.730310090387373,0.487932798790507,2.33930010345897,1.42800483870977,1.25381888591235,4.57977579409691,3.96935832711364,3.13856598987007,1.60468152070698,1.47781061009902,2.04648031415566,0.393364276848904,0,0.77408061658038,0.919421224478927,0.30120591877825,0,6.50724484874534,1.70603078984906,0.587200878669695,0,0.200544447470142,0.434021741431704,0.447830948479849,0,0.257575567634187,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0.425208599930087,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0.557052284425868,0,0,0,0.384273959177026,0.390178042679635,1.15106533222573,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.66221330396589,1.80719576192283,1.00267582127178,1.01392563272577,2.3858578411533,3.89307896242109,2.45790524626576,0.665188192387692,0.702678285545008,0.196468613246569,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0.571994910780128,0,1.19257444420023,2.58070378531837,1.38856200643038,0,0.419499436209906,0.275118041940067,0.626984899610432,0,0,0,0.402829317109147,0.760272105718513,0.732186172644509,0.367663080345869,0,2.32179293538607,1.12264686313085,1.91439516821648,0,0.949265659568129,1.09921046358244,0,0,1.3082821564276,2.48485975847659,2.02608818663328,0,0.573673241497627,2.83734705758686,3.36406560085384,1.06748995729705,0.49333509683432,0.622422070799533,0.134710672069688,0.817309515567294,0.756787138224657,0,2.10889288650417,0.624320153660641,1.71141546463335,0.597794722207204,1.87895197830024,1.94247533241758,2.38766371393822,1.22492502752936,3.93069815397658,0.516628905878827,4.75201142912821,1.48360157567134,1.82032272387605,0,2.18836948140286,2.62748891731125,2.77064115484183,1.31693286264251,2.45190236639216,1.05166641234618,1.47461838108027,0.89694817844431,0.640672166455702,2.96704661623387,1.20036438433761,1.33968288009971,0.257640540045629,0.558350568994769,1.5189869901714,1.16924406193438,2.01947019395292,2.85354685791128,1.13152239773168,0.355009592516614,1.0075209822764,3.05209066158878,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,2.76269842704961,1.39310378409594,0.721879481669586,5.20549920175313,4.21461725195254,3.85617647813571,6.06616850028167,6.75426276686459,4.50814176311084,3.91010793664477,4.90553662813365,6.54070166808864,1.4763109092493,1.40241773803446,2.8810180793198,0,0,0.982827216677626,1.77236972004421,3.97316789473185,0.614942192715568,0.514703430895577,0,0,0.201057944823262,0.277765335475589,0,4.15973914111831,0,1.62302566965108,0.117408694235822,0.577465791044295,0.462985512576611,0.380508304469197,3.1608175918371,1.71697232418975,0.492434012174795,0.234004265139238,0.594524649154913,0,0.335964256397719,0.425325291727159,0.806026704325635,1.45316969256981,1.53353071666084,0,1.67292024625129,0.829312462163088,1.00883967391873,0.6312121671319,5.3338231205422,0.763976851116555,1.17217447210047,3.4214489204541,1.43958489784653,1.8020583470635,0.857479297891735,0.560655421726804,0.43596006883328,1.98013371716565,0,3.57656445851882,2.535908257668,1.06375246633948,0,3.60090323966999,2.83698264046557,2.66422179016099,1.00084595560703,1.08524321078289,2.46972101034231,2.28015329005615,2.48774364119782,1.58390374586686,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,2.29723871668228,9.98458335285029,2.02693829334611,0.821905290201534,2.68591444859843,2.4658731678576,0,0.215627574859517,0.256686072559497,0.76228387266739,1.30139853857622,1.54657762555539,1.00509759200609,1.91381625495949,0.749007023947182,0,0,0.736148950314839,1.00034104211935,0.271265023699736,1.45579603071565,2.67643483195743,2.20783381047509,2.57711112983969,0.300946099727719,0,3.10419213877515,3.32112799267718,0.737476674166813,1.82455590382974,0.391602314925481,0.343143423810856,0,0,0,1.81876542867756,1.66435439510497,2.72151263996712,0.744323423456331,0.920771839728375,0.561320188866147,0.768834895534206,0.511707249066704,0,0,2.46735510084249,1.06537035187876,2.38168752440047,2.59627214591811,1.39452454151951,0.362578348774867,0,0,2.52591785962135,1.82091168006717,0.655622074797121,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.316654886678627,1.13733384070897,1.19065593693561,0.647747748306418,1.54227252690289,2.16757150035082,1.50506932156456,0.254876273045038,0,0.447749509444357,24.9956259376365,21.6991424350667,2.3080511260475,0.656029291399411,0,0.721287081534056,13.0944334690231,11.8813679885647,0.574265537996172,0,0,0.193341436584244,1.84858340537573,1.5350367472613,1.37836572484531,0.966782203814463,0.870100163485371,2.13066568540252,0.890320356467374,0,0,0,0,0.929691098594572,1.25924938732256,2.0911118104818,4.92853728281742,1.06461206063404,0,0.18532421910392,0.286249773483982,0.744316738719335,0,0,2.81487570442467,0.42793898803392,1.90921948755562,0.78494864019923,1.2591072030832,1.37268514868027,1.53156123049392,1.61745985258653,1.58510321173008,0,4.38870365180631,0.243713489631284,0,1.09199929126389,0.282810863907425,2.26016233240486,2.2054613741845,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,1.14729081763241,0.589494246078727,0,1.41904425628239,1.05553817648832,1.31717957183961,3.79473173765715,3.84928192269481,0.288666338176536,0,0,0.564862804660675,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0,0,0.238231775457789,0,0,0,0,2.02965735142199,0,1.71528151186722,0,6.49211458394002,3.77051769746595,4.94221445459349,1.79621434289535,3.83010740264733,4.02179807175377,2.59697552219644,2.80797178113459,2.05411211129873,6.11051593514791,0,2.37008488922245,6.74469915435538,5.65039180134933,6.38769356535489,1.37402137902306,15.0547974511144,10.2891009630511,8.17560794388352,8.98785238849385,5.01131113011436,14.7704878737255,14.3341509592271,4.9960795199673,8.45922030527097,2.8071081061233,0.293016358543788,13.1069363489475,2.67464122265948,5.39858678932185,0.47748896947538,1.48482340416319,0,0,0.281338832821026,0.445234820091624,0,2.11125408127993,0.398495976502139,1.38141957765574,9.06957892275394,2.24991101504741,0.123084805461069,0.311039587661807,1.3480252672099,0.179021174675609,1.02314474045374,0.394573622547734,0,1.11136990144637,0.969332746095218,0.185536196323703,0,1.82299432759663,1.22443999994674,1.44999915086959,1.4793148277115,3.0510438035132,2.12748913591143,18.2713987817976,11.0809753085637,5.72962483279864,0.885741385813839,0,0,0.884634079449797,1.18219047581419,0,2.06983080686081,0.557694977114413,0.384751292518985,1.59518878185802,0.46112780877612,0.0897576444097721,0.54323685961004,0,1.00757352742049,0.533034776018635,1.02193298195737,0.31396051279005,6.98089063980657,16.6940788856714,13.9204399365595,12.5866190231882,3.22581345631115,7.62895579105818,1.26598838716816,0.652931232636591,0.141353071433941,1.94749775767882,0,1.23840590304675,1.22206028986725,0.593042257361244,1.23563938946503,1.14864144456001,0.606610196826093,0,0,3.64909578431332,0,0.971121518136371,0.394584402849391,0,0.61214552326098,0.063186579628488,1.9542044523884,3.31802212471191,0.664653872707185,0.661983911750998,0.627865836814451,0,3.13070500632772,0.693373365065693,0.520679215005393,1.17590876897253,1.13176968554523,0.698906672968121,3.78369271437556,8.99833880988492,11.6942907337897,8.78635390469339,0.484945082442097,0,0.451961481561065,2.60379656828827,3.37814839895082,0.379864775735272,4.30213042016567,1.84365286578528,0.85381197895741,2.39771531498556,0.144090417154106,8.81931790477551,4.63306494227304,0.432164393964449,0.248505071130865,2.82832841540154,6.38749768545986,6.48537647136466,0,1.73370353940911,0.600420288709789,0.273810757783986,0,2.57859264851974,0,0.837847203816763,0.916641696046735,0,2.1964690054889,0.858452096273142,0.89268582976749,0.940568614814168,0.720599767084807,0,4.25429184459008,4.36804049420182,4.11161617510528,1.08270229666224,5.84245991253913,0,0.681017030557878,0,0,0,0.2249738915515,0,0,0.670869375198532,0.551639951094387,0.314727528809989,0.105600336519406,0.35857467866569,1.53532157855556,0,0.662091970365432,1.017074150619,0.542999601753713,0.864221491201268,0.979762080328227,3.59190574687462,1.06720276974141,1.87426823963964,3.39936274560377,0.146552233678082,1.32506888912221,0.387848869084652,0,1.02652102730598,0,0,0,0,0.496166021811951,3.35939774226505,9.74340787047167,0,0.544017803369474,0.5013797880454,0,0.983617892129413,2.19875734750328,0,0.244052529803926,0.500763722825999,0,0.110929051536852,0.124192805882767,2.35192679391592,1.8747061194316,0.758245587708239,0.285465333544967,0.705797459094515,7.02502358710322,8.40541965942786,1.64180283175561,0.934853239388898,0.554805861502613,0.378806010550178,1.0062716070103,0,0,0.302461847526478,1.70980920641059,1.92211694986524,1.11507737014592,0,0.621051827505038,2.90294345488599,0.797525143673985,0,0.150257608997218,0,1.62748293281865,0.727394636810238,0.322231671127465,0.464033759878494,0,5.60038870528415,0.686791410365586,1.34699795506368,0,0.963099152036517,3.64550705337374,0,2.26705925512272,0.694567422971502,0.734210113519403,3.04451029838529,0.926404341482917,2.19284049578707,3.53378291891762,2.50788249752189,7.09558250742905,2.30617366729152,2.41801239211839,3.03859956177382,0.829550616910385,0.584580926518165,0.531459361253452,0.163565394255844,1.63804924423206,1.2288645437686,1.05656061679314,0.59996218756479,1.70706767510625,0,6.2426754892352,5.8913904080589,0,1.86623178009892,2.30209868346573,7.43991198637104,1.72992536041486,7.97230358801702,2.0367903594483,2.12574920101683,1.48722917110803,6.70373901567893,0.636008701306837,2.52357584004011,2.40171224485641,2.46873160583479,0.918736432059601,0.128458450192919,2.8339315265117,0.159633859057151,0,0.504143392443436,0.484100767249525,0.322951291263702,1.42769420259154,2.84628383652974,0.943757786781923,0.183428598521679,0.231051332300676,0.762764190934334,0,2.18807844327902,1.0529445968896,7.26138247332672,2.34454203369928,1.04762677792569,0.327543835020193,0.443568258651136,0.337687923091973,0,0,0.317079050969534,1.09394961803644,0.548257766857182,0.496211178389294,1.58284119923659,0.511049710558381,1.07140367175657,0.336283722218824,0,2.04895972216168,0.443511850813194,3.11131766400604,3.25827217931095,0.611727596791485,0.328863867814245,7.20982429392206,2.00216523405724,0.235479278551542,0,0,0,5.39818978046554,3.8220135030964,0.142953088353313,6.79458530450724,2.55731135809876,7.82362225361607,0.801711364730253,0,0.51215543128185,0.691259661814092,0,0.354996002191696,0.255640214277473,0,1.60374807980835,0,0.955538938977433,0.894843454382338,1.07965256976767,0.975343399858155,0,0.102662806856247,0,0.971421986118279,3.9769708788558,1.39265542612958,2.61624199710651,0.11294608203896,1.20934568419972,4.22695961986686,1.54348316215889,0.218559560503957,4.23285566725371,0.980593287015622,0,0.588925401344836,0,0.4226557275834,1.86919826156599,0.939839179798536,0.45120521581504,4.19752854884702,0.535661815816973,0,0.320965466756673,0,0.458729283404541,0.716697915757256,1.73548718412503,0.0679914901909147,0,0.5290268405154,1.11598505450025,0,0.865253124247578,0,0.109265571963696,0.633492505057185,0,0,0,0,0.303114792872958,0.803892390468535,0,0.930896962757057,0.639701945702943,0.714193294391221,5.03793496720848,2.73128742901775,1.45771421354797,0.190941474834495,0.606351566874658,0.653150243690884,0.684466602170562,0.80822463617505,0.717222053926764,0.665320713092027,0.814032686109745,2.24127426343202,1.9307228228694,0.359300808426348,2.34640942403454,0.244482888365733,1.22068853494722,0.665756774185513,1.61019034872821,1.60284246151616 | |||
|short_description=p4@CDKN2C | |||
}} |
Revision as of 18:29, 10 January 2014
Short description: | p4@CDKN2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDKN2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396148, NM_001262_5end |
EntrezGene: | CDKN2C |
HGNC: | 1789 |
UniProt: | P42773Q6ICV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.73e-32 | 235 |
disease of cellular proliferation | 2.12e-30 | 239 |
hematologic cancer | 2.72e-18 | 51 |
immune system cancer | 2.72e-18 | 51 |
organ system cancer | 5.40e-17 | 137 |
leukemia | 7.24e-17 | 39 |
myeloid leukemia | 5.03e-16 | 31 |
cell type cancer | 1.33e-14 | 143 |
sarcoma | 4.89e-09 | 20 |
carcinoma | 1.06e-08 | 106 |