FFCP PHASE1:Hg19::chr1:111888890..111888915,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128344 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27009 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TCI5 | |||
|association_with_transcript=0bp_to_ENST00000369738_5end | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_2_at_C1orf88_5end | |||
|id=chr1:111888890..111888915,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.35e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.02e-11;7!CL:0000586;1.02e-11;7!CL:0002322;3.27e-09;5!CL:0000349;6.53e-09;19!CL:0000244;7.71e-07;4!CL:0000731;7.71e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.76e-12,7;CL:0000586,6.76e-12,7;CL:0002322,3.42e-09,5;CL:0000349,9.39e-09,19;CL:0000244,4.40e-07,4;CL:0000731,4.40e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.68e-07!14;UBERON:0000158!3.68e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.23e-08;24!UBERON:0001987;5.41e-07;4!UBERON:0005631;9.86e-07;10!UBERON:0000158;9.86e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.17e-11,14;UBERON:0000158,1.17e-11,14;UBERON:0000478,1.28e-07,24;UBERON:0003124,1.84e-07,7;UBERON:0006554,6.04e-07,47;UBERON:0001987,7.47e-07,4;UBERON:0004340,7.47e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,2.45733936501509,1.39560233594486,5.02415155899396,4.48403862988371,0,0.331397375727916,0,0,0.730310090387373,0,0.492484232307152,0.204000691244253,0.940364164434263,0.286235987131057,0.410623275218653,0.125542639594803,0.382067028739756,0.328402357799783,0.550975469195755,0.393364276848904,1.15148819429164,0.154816123316076,0,0.30120591877825,0,0,0.142169232487422,0.880801318004542,0.553995408531877,0.200544447470142,0.217010870715852,0,0.647787332037959,0.515151135268373,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0,1.180258620683,0.786021525498329,1.64481199199607,0.167186495390678,0.32592226663359,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0,0,0.328875809207352,1.10540007114339,0.289803085735052,1.03800594213442,0,7.31748666634838,0.453237370790265,1.53288197440768,0.34362744548263,1.51811815211702,0.637130828648193,1.30216690771284,0.950452044448374,0.301150238155546,1.27986611154418,1.24930726552346,0.710331756132051,0,0.403213486449465,0.802320587350522,0.868946423296794,0,0,0,0,0.50133791063589,0.289693037921647,0,6.8128881842369,0.189069634328136,0.443458794925128,0.702678285545008,0.196468613246569,1.45718115317017,1.11235332835329,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,2.63560834872127,3.87780264148325,3.48875241714027,0,0,0,0,0,0.560677600142307,1.06748995729705,0.98667019366864,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,2.51239109112286,0.545492241181669,0.860413786167011,6.83052754325734,5.56625026950238,6.27447291495399,8.08556229119889,13.8776467981596,4.37972830890996,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0.653638332277218,0,0.134831308160164,0.196221465125346,0,0,0,1.2347220339942,0,0,0,0,0,1.47586126251736,0.171567810298526,0.768251997860379,2.24803506515239,0.201057944823262,2.22212268380471,0.651616610620649,0,0,0.927443239800615,1.40890433082986,0,0,0.380508304469197,0.790204397959275,1.71697232418975,0,0,0,1.87467667973554,1.6798212819886,1.41775097242386,0.806026704325635,1.16253575405585,2.68367875415648,0.985326475791887,0.264145302039678,0.829312462163088,1.00883967391873,0.75745460055828,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0.823240336780769,0,0,0,1.20575750823834,1.74306691720059,2.99918973546171,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0,0,0,0.197030760201927,1.07813787429759,0.256686072559497,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0.415941723061614,0.356857977594324,0,0.35142424497814,0.902838299183157,0,0,0.664225598535437,0,0.173767228936166,0.195801157462741,0,0,1.2942852049117,0.533637789017222,1.21251028578504,14.9791895559447,6.95497674658265,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0.604297247958111,0.40101294060657,0.552485933615378,0.114814448164607,0,0,0.902399225814824,1.23224539367064,0,1.46139224653261,1.26661954671451,0,0,0,0,0.541892875087706,1.00337954770971,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0,0,0,1.33953315142039,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0.0852266274161009,0,0.661139661443912,1.34533047155574,0.127612712494584,0.708104465988849,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.471249609382746,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0.48111056362756,2.01090682660736,0,1.03558180854457,1.72202149068492,5.05414427002877,3.99087138183008,4.13502120372527,1.52234282769651,0,0,0.714695326373367,0,0.648473311192717,0,0,0,0,0.245040215981032,0.185803175125719,0,0.213425530045242,0,0,0.383010740264733,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0.307240764308458,0.447352215784832,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,8.01804638248124,1.53580351049616,0,0.562677665642051,0,0,1.26675244876796,0.19924798825107,0.828851746593443,1.76352923497993,3.57940388757542,0.984678443688556,0,0.269605053441981,0,0,1.38100767891707,0,0,0,0.0927680981618513,0,0.260427761085233,0.174919999992391,1.44999915086959,0,0.508507300585533,0,0.344743373241465,1.45802306691627,0.173624994933292,0.885741385813839,0.361789315876224,0,0,0,0,0.217876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| |||
|short_description=p2@C1orf88 | |||
}} |
Revision as of 20:08, 10 January 2014
Short description: | p2@C1orf88 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf88_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000369738_5end |
EntrezGene: | C1orf88 |
HGNC: | 27009 |
UniProt: | Q8TCI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.76e-12 | 7 |
germ cell | 6.76e-12 | 7 |
embryonic stem cell | 3.42e-09 | 5 |
extraembryonic cell | 9.39e-09 | 19 |
transitional epithelial cell | 4.40e-07 | 4 |
urothelial cell | 4.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.17e-11 | 14 |
membranous layer | 1.17e-11 | 14 |
extraembryonic structure | 1.28e-07 | 24 |
chorion | 1.84e-07 | 7 |
urinary system structure | 6.04e-07 | 47 |
placenta | 7.47e-07 | 4 |
allantois | 7.47e-07 | 4 |