FFCP PHASE1:Hg19::chr1:119530930..119530971,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_at_chr1:119530930..119530971,- | |||
|id=chr1:119530930..119530971,- | |||
|ontology_enrichment_celltype=CL:0002620!6.48e-16!23;CL:0000055!4.18e-15!180;CL:0000057!3.78e-11!75;CL:0000188!3.61e-08!9;CL:0000327!6.17e-08!14;CL:0000153!8.49e-08!9;CL:0000447!8.49e-08!9;CL:0000499!4.96e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.10e-21;23!CL:0000188;2.16e-11;9!CL:0000153;7.60e-11;9!CL:0000447;7.60e-11;9!CL:0000327;1.33e-10;15!CL:0002570;3.05e-08;8!CL:0000138;4.10e-08;6!CL:0002551;1.63e-07;6!CL:0000062;4.82e-07;9!CL:0000499;4.90e-07;28!CL:0000136;5.92e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.04e-21,23;CL:0000057,6.42e-12,76;CL:0000188,1.99e-11,9;CL:0000153,7.10e-11,9;CL:0000447,7.10e-11,9;CL:0000327,1.20e-10,15;CL:0000136,8.37e-09,15;CL:0002570,2.52e-08,8;CL:0000058,3.92e-08,6;CL:0000138,3.92e-08,6;CL:0002551,1.50e-07,6;CL:0000062,4.02e-07,11;CL:0000375,4.02e-07,11;CL:0000335,4.02e-07,11;CL:0000499,4.73e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000335;4.03e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.76e-08;5!DOID:450;9.76e-08;5!DOID:66;9.76e-08;5!DOID:423;9.76e-08;5!DOID:0080000;9.76e-08;5!DOID:11722;9.76e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.44e-08,5;DOID:450,9.44e-08,5;DOID:66,9.44e-08,5;DOID:423,9.44e-08,5;DOID:0080000,9.44e-08,5;DOID:11722,9.44e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.73e-13!45;UBERON:0002416!2.73e-13!45;UBERON:0002097!4.64e-12!40;UBERON:0000475!9.46e-08!365;UBERON:0002616!1.20e-07!59;UBERON:0002067!2.11e-07!9;UBERON:0004016!2.11e-07!9;UBERON:0010083!2.11e-07!9;UBERON:0004290!3.45e-07!70;UBERON:0007023!4.17e-07!115;UBERON:0001049!9.45e-07!57;UBERON:0005068!9.45e-07!57;UBERON:0006241!9.45e-07!57;UBERON:0007135!9.45e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.19e-16;16!UBERON:0002036;1.19e-16;16!UBERON:0002097;3.06e-14;41!UBERON:0002199;6.84e-12;46!UBERON:0002416;6.84e-12;46!UBERON:0003102;6.80e-11;50!UBERON:0002067;3.15e-10;9!UBERON:0001013;2.89e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.44e-19,46;UBERON:0002416,3.44e-19,46;UBERON:0002097,2.58e-18,41;UBERON:0002067,2.76e-10,9;UBERON:0004016,2.76e-10,9;UBERON:0010083,2.76e-10,9;UBERON:0003102,1.33e-09,99;UBERON:0001013,2.43e-08,14;UBERON:0002384,3.57e-07,371;UBERON:0002329,8.63e-07,71;UBERON:0003059,8.63e-07,71;UBERON:0007282,8.63e-07,71;UBERON:0004290,8.63e-07,71;UBERON:0009618,8.63e-07,71 | |||
|phase1_expression=8.53888382571616,8.13581990785736,0,4.00293193412522,0,0,0,2.52687949370732,8.61912573059467,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0.626909442956176,0,0.410623275218653,1.88313959392204,0,0,0,0,0,2.01260960310899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26479403160043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,0,0.12786256184353,18.4333967716129,6.01605492763067,10.4289493651793,16.7010048880731,27.7381876072502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0.71153252537342,0,0,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0.549605231791222,0,0,0,13.9152146474689,0.633152558322899,0.264818361626438,0,0.709336764396714,2.24271040056923,0,0,0.311211035399766,0,0,11.5031645010148,10.37116664064,2.10889288650417,1.87296046098192,5.13424639390004,1.19558944441441,27.8319761785723,21.8528474896978,16.5731951908653,0,0.737005903870608,0,0,0,0,0,0.505008341862199,3.37820003654303,0,0,0,0.150238058906597,0,20.6298081042191,18.5794928272154,11.6562545637759,18.0054657650641,15.8700895027196,11.3361837620077,6.51408997160564,7.08860595413318,4.18979122193154,36.3504634911525,24.8534726334208,0.484938170456436,16.6854508482809,12.3925080819998,5.25637836162512,0,0,0,0.121973706129595,0,0,0.621966330092223,0,0,4.69348596989448,9.64861407289328,5.52539685409922,9.75172648867156,13.7157101517221,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0.308482478109971,0,0,13.4557301214433,12.6428419961651,8.800594298514,0,10.7296933755565,2.535908257668,0,0,12.3459539645828,0,12.5218424137567,0,0,0,3.58309802723109,0,0,0,0,0,0,0,0,6.23024624278115,21.8237678084816,2.85273810081437,0.579125226670317,1.64381058040307,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,1.03985430765404,0.178428988797162,0.157702415033935,0.234282829985426,19.8624425820294,11.3703752027992,10.3473071292505,7.97070718242524,7.00602840458472,0.695068915744663,8.61525092836058,6.51972505240626,0,0,0,0,0,1.20956117331872,8.43566546583841,22.5589100733452,15.155645099386,0.128139149255701,2.55853624533352,0,0,1.07946785661859,0.710246901252508,4.5169935807595,0,2.5566283261191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.515205058238611,0,0,1.14853107599234,0,0,17.6907414474583,13.2481810718594,13.047812351721,6.61615547925747,22.0211501979961,13.9216026157659,11.0794615640931,9.79352392114111,0,0,0,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,7.81532575655301,0.316379424718726,1.90630193923825,0,0,1.59101623962968,0,0.179872457583315,0,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,8.44430541190656,6.58589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1097033972572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6389313725814,0,0,0.284136146806413,0,3.26661148915902,0,0,0.422008249231538,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0.933118762985422,0,0,0,0.0986434056369336,0,2.22273980289274,0,0.556608588971108,0,0,0,24.649985564783,0,0,0,0,0,2.95162491386597,0.885741385813839,0,0,0.331737779793674,0,2.63262476584767,0,0,0.0769502585037971,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,1.46909527343233,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,63.4036341366043,0,0,0,0,0,0,0.30607276163049,12.8268756645831,0,0,0,0,0,0,0,0,0.867798691675654,0,0,2.09672001890436,2.40780445460263,0,0,0,1.74580229679155,2.82419605412801,19.2083629663453,0,0,0.443175571691151,0,0,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0,0,0,0,0,0,8.37956710714405,0,0.547621515567972,0,0,0,0.558564802544508,0.458320848023367,0,0,0,1.11585728720936,0.335917362433631,0.360299883542404,0,0,0,0,4.0355267421047,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,11.9683916741284,22.8127803560657,13.7855509543558,33.1151357016902,0.157054096250234,0,0.122026264901963,0.500763722825999,0.573409195690071,3.77158775225298,0.745156835296601,0,0,0,0,0,0,0,1.64180283175561,3.73941295755559,1.66441758450784,12.1217923376057,8.55330865958755,6.22867855117575,0.228840068396924,0.604923695052956,0.621748802331122,1.03498604992744,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,1.20008329398946,9.6150797451182,10.7759836405094,5.04739592914604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,12.3350986668733,0,4.35454082023081,0,1.50954735955355,0.157265941855896,0,0,0,0,0,10.1761392209094,0,0,0,0,0.578063025868136,0,0.319267718114302,0.41023272848151,0.504143392443436,0.0691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| |||
|short_description=p@chr1:119530930..119530971,- | |||
}} |
Revision as of 20:24, 10 January 2014
Short description: | p@chr1:119530930..119530971, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:119530930..119530971, - |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.04e-21 | 23 |
fibroblast | 6.42e-12 | 76 |
cell of skeletal muscle | 1.99e-11 | 9 |
GAG secreting cell | 7.10e-11 | 9 |
carbohydrate secreting cell | 7.10e-11 | 9 |
extracellular matrix secreting cell | 1.20e-10 | 15 |
fat cell | 8.37e-09 | 15 |
mesenchymal stem cell of adipose | 2.52e-08 | 8 |
chondroblast | 3.92e-08 | 6 |
chondrocyte | 3.92e-08 | 6 |
fibroblast of dermis | 1.50e-07 | 6 |
osteoblast | 4.02e-07 | 11 |
osteoprogenitor cell | 4.02e-07 | 11 |
mesenchyme condensation cell | 4.02e-07 | 11 |
stromal cell | 4.73e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
integument | 3.44e-19 | 46 |
integumental system | 3.44e-19 | 46 |
skin of body | 2.58e-18 | 41 |
dermis | 2.76e-10 | 9 |
dermatome | 2.76e-10 | 9 |
future dermis | 2.76e-10 | 9 |
surface structure | 1.33e-09 | 99 |
adipose tissue | 2.43e-08 | 14 |
connective tissue | 3.57e-07 | 371 |
somite | 8.63e-07 | 71 |
presomitic mesoderm | 8.63e-07 | 71 |
presumptive segmental plate | 8.63e-07 | 71 |
dermomyotome | 8.63e-07 | 71 |
trunk paraxial mesoderm | 8.63e-07 | 71 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.44e-08 | 5 |
myotonic disease | 9.44e-08 | 5 |
muscle tissue disease | 9.44e-08 | 5 |
myopathy | 9.44e-08 | 5 |
muscular disease | 9.44e-08 | 5 |
myotonic dystrophy | 9.44e-08 | 5 |