FFCP PHASE1:Hg19::chr1:161736125..161736136,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=791 | |||
|TSSclassifier=strong | |||
|UniProt=P18850,Q59H30 | |||
|association_with_transcript=41bp_to_ENST00000367942,uc001gbq.1,uc001gbr.2_5end | |||
|description=CAGE_peak_5_at_ATF6_5end | |||
|id=chr1:161736125..161736136,+ | |||
|ontology_enrichment_celltype=CL:0000557!3.78e-19!71;CL:0000766!4.51e-19!76;CL:0000763!5.25e-19!112;CL:0000049!5.25e-19!112;CL:0000839!3.08e-18!70;CL:0002009!1.83e-16!65;CL:0002194!2.15e-15!63;CL:0000576!2.15e-15!63;CL:0000040!2.15e-15!63;CL:0000559!2.15e-15!63;CL:0002057!1.07e-13!42;CL:0000860!1.24e-12!45;CL:0002032!7.27e-09!165;CL:0000837!7.27e-09!165;CL:0000037!1.16e-08!172;CL:0000566!1.16e-08!172;CL:0000738!1.67e-07!140;CL:0002031!4.01e-07!124;CL:0000988!9.99e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.28e-12;33!CL:0002057;7.28e-12;33!CL:0000473;1.73e-11;39!CL:0000234;1.73e-11;39!CL:0000576;4.38e-10;48!CL:0000766;6.89e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.65e-20,67;CL:0000766,2.35e-20,72;CL:0000763,9.18e-20,108;CL:0000049,9.18e-20,108;CL:0000839,1.52e-19,66;CL:0002009,1.05e-17,61;CL:0002194,1.41e-16,59;CL:0000576,1.41e-16,59;CL:0000040,1.41e-16,59;CL:0000559,1.41e-16,59;CL:0000473,2.17e-15,48;CL:0000234,2.17e-15,48;CL:0000860,1.24e-13,42;CL:0002057,1.24e-13,42;CL:0002032,6.01e-09,161;CL:0000837,6.01e-09,161;CL:0000037,9.61e-09,168;CL:0000738,1.20e-07,136;CL:0002031,2.72e-07,120;CL:0000988,4.54e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.38e-17!80;UBERON:0002193!3.39e-16!112;UBERON:0001474!4.02e-15!86;UBERON:0002390!6.78e-15!102;UBERON:0003061!6.78e-15!102;UBERON:0004765!6.40e-14!101;UBERON:0001434!6.40e-14!101;UBERON:0002405!1.20e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.86e-19,93;UBERON:0002371,1.80e-18,76;UBERON:0002193,2.20e-17,108;UBERON:0001474,2.11e-16,82;UBERON:0002390,8.37e-16,98;UBERON:0003061,8.37e-16,98;UBERON:0004765,1.69e-15,90;UBERON:0001434,1.49e-14,100;UBERON:0003081,4.12e-08,203 | |||
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| |||
|short_description=p5@ATF6 | |||
}} |
Revision as of 21:56, 10 January 2014
Short description: | p5@ATF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000367942, uc001gbq.1, uc001gbr.2_5end |
EntrezGene: | ATF6 |
HGNC: | 791 |
UniProt: | P18850Q59H30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.65e-20 | 67 |
myeloid leukocyte | 2.35e-20 | 72 |
myeloid cell | 9.18e-20 | 108 |
common myeloid progenitor | 9.18e-20 | 108 |
myeloid lineage restricted progenitor cell | 1.52e-19 | 66 |
macrophage dendritic cell progenitor | 1.05e-17 | 61 |
monopoietic cell | 1.41e-16 | 59 |
monocyte | 1.41e-16 | 59 |
monoblast | 1.41e-16 | 59 |
promonocyte | 1.41e-16 | 59 |
defensive cell | 2.17e-15 | 48 |
phagocyte | 2.17e-15 | 48 |
classical monocyte | 1.24e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-13 | 42 |
hematopoietic oligopotent progenitor cell | 6.01e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.01e-09 | 161 |
hematopoietic stem cell | 9.61e-09 | 168 |
leukocyte | 1.20e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 2.72e-07 | 120 |
hematopoietic cell | 4.54e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.86e-19 | 93 |
bone marrow | 1.80e-18 | 76 |
hemolymphoid system | 2.20e-17 | 108 |
bone element | 2.11e-16 | 82 |
hematopoietic system | 8.37e-16 | 98 |
blood island | 8.37e-16 | 98 |
skeletal element | 1.69e-15 | 90 |
skeletal system | 1.49e-14 | 100 |
lateral plate mesoderm | 4.12e-08 | 203 |