FFCP PHASE1:Hg19::chr1:201336928..201336939,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000503459_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_20_at_TNNT2_5end | |||
|id=chr1:201336928..201336939,- | |||
|ontology_enrichment_celltype=CL:0000188!4.27e-16!9;CL:0000594!5.15e-13!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.49e-23;1!UBERON:0010226;1.49e-23;1!UBERON:0005062;5.14e-23;4!UBERON:0007284;5.14e-23;4!UBERON:0004140;5.73e-23;1!UBERON:0003104;6.58e-07;31 | |||
|ontology_enrichment_disease=DOID:114!7.77e-20!2;DOID:178!1.08e-10!1;DOID:326!1.08e-10!1;DOID:3978!1.08e-10!1;DOID:3394!1.08e-10!1;DOID:5844!1.08e-10!1;DOID:1287!2.18e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:114;5.00e-45;2!DOID:178;3.28e-23;1!DOID:326;3.28e-23;1!DOID:3978;3.28e-23;1!DOID:3394;3.28e-23;1!DOID:5844;3.28e-23;1!DOID:1287;4.11e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.00e-45,2;DOID:178,3.28e-23,1;DOID:326,3.28e-23,1;DOID:3978,3.28e-23,1;DOID:3394,3.28e-23,1;DOID:5844,3.28e-23,1;DOID:1287,4.11e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.66e-21!27;UBERON:0004151!1.33e-13!3;UBERON:0003978!1.70e-13!3;UBERON:0009751!1.70e-13!3;UBERON:0000946!1.70e-13!3;UBERON:0002523!1.70e-13!3;UBERON:0005983!1.70e-13!3;UBERON:0002165!1.70e-13!3;UBERON:0002062!1.70e-13!3;UBERON:0007280!1.70e-13!3;UBERON:0002084!7.40e-11!1;UBERON:0002082!7.40e-11!1;UBERON:0004706!7.40e-11!1;UBERON:0002079!8.14e-11!1;UBERON:0002135!8.95e-11!1;UBERON:0002146!9.84e-11!1;UBERON:0005623!9.84e-11!1;UBERON:0000948!1.19e-09!24;UBERON:0005498!1.19e-09!24;UBERON:0004140!1.19e-09!24;UBERON:0009881!1.19e-09!24;UBERON:0004141!1.19e-09!24;UBERON:0003084!1.19e-09!24;UBERON:0007005!1.19e-09!24;UBERON:0004139!1.19e-09!24;UBERON:0004291!1.19e-09!24;UBERON:0007023!6.27e-08!115;UBERON:0003103!1.17e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.87e-56;25!UBERON:0004151;1.47e-30;3!UBERON:0003978;2.67e-30;3!UBERON:0000946;2.67e-30;3!UBERON:0000948;3.30e-25;22!UBERON:0002084;1.49e-23;1!UBERON:0002079;1.49e-23;1!UBERON:0002082;1.49e-23;1!UBERON:0002135;2.34e-23;1!UBERON:0002146;2.34e-23;1!UBERON:0005623;2.34e-23;1!UBERON:0002081;1.75e-12;2!UBERON:0002133;2.19e-12;2!UBERON:0003103;4.07e-11;61!UBERON:0010313;8.09e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.05e-51,27;UBERON:0004151,1.47e-30,3;UBERON:0003978,2.67e-30,3;UBERON:0009751,2.67e-30,3;UBERON:0000946,2.67e-30,3;UBERON:0002523,2.67e-30,3;UBERON:0005983,2.67e-30,3;UBERON:0002165,2.67e-30,3;UBERON:0002062,2.67e-30,3;UBERON:0007280,2.67e-30,3;UBERON:0002084,1.34e-23,1;UBERON:0002082,1.34e-23,1;UBERON:0010226,1.34e-23,1;UBERON:0002079,1.67e-23,1;UBERON:0002135,2.10e-23,1;UBERON:0002146,2.62e-23,1;UBERON:0005623,2.62e-23,1;UBERON:0000948,3.80e-23,24;UBERON:0005498,3.80e-23,24;UBERON:0004140,3.80e-23,24;UBERON:0009881,3.80e-23,24;UBERON:0004141,3.80e-23,24;UBERON:0003084,3.80e-23,24;UBERON:0007005,3.80e-23,24;UBERON:0004139,3.80e-23,24;UBERON:0004291,3.80e-23,24;UBERON:0003103,1.55e-20,68;UBERON:0004797,1.31e-13,7;UBERON:0002081,1.85e-12,2;UBERON:0010227,1.85e-12,2;UBERON:0002133,2.07e-12,2;UBERON:0001009,2.08e-12,112;UBERON:0010313,8.09e-10,10;UBERON:0002342,8.09e-10,10;UBERON:0005062,8.09e-10,10;UBERON:0007023,2.25e-09,114;UBERON:0004872,8.18e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.511359764496605,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18923601908381,4.12488763221031,0,3.59422200898184,10.3014251552777,1.33902874465124,1.34366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14695326373367,7.94510364438518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p20@TNNT2 | |||
}} |
Revision as of 23:16, 10 January 2014
Short description: | p20@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000503459_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 5.00e-45 | 2 |
vascular disease | 3.28e-23 | 1 |
ischemia | 3.28e-23 | 1 |
extrinsic cardiomyopathy | 3.28e-23 | 1 |
myocardial ischemia | 3.28e-23 | 1 |
myocardial infarction | 3.28e-23 | 1 |
cardiovascular system disease | 4.11e-23 | 4 |