FFCP PHASE1:Hg19::chr10:17659357..17659401,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9639 | |||
|TSSclassifier=strong | |||
|UniProt=A6NP58,B0YJ81 | |||
|association_with_transcript=0bp_to_ENST00000326961,ENST00000361271,NM_014241,uc001ipg.2,uc001iph.1,uc001ipi.2_5end | |||
|coexpression_cluster_id=C3003 | |||
|description=CAGE_peak_2_at_PTPLA_5end | |||
|id=chr10:17659357..17659401,- | |||
|ontology_enrichment_celltype=CL:0000055!2.66e-20!180;CL:0000220!3.28e-15!246;CL:0002321!5.45e-15!248;CL:0000057!3.28e-12!75;CL:0000066!7.33e-12!254;CL:0000222!5.43e-09!119;CL:0000012!4.88e-07!682;CL:0000548!6.02e-07!679;CL:0000004!6.02e-07!679;CL:0000255!6.02e-07!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.54e-15,250;CL:0000057,1.26e-12,76;CL:0000066,7.51e-12,253;CL:0000222,4.19e-09,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!5.21e-13!216;UBERON:0000475!8.59e-13!365;UBERON:0005256!3.40e-12!143;UBERON:0003104!3.85e-12!238;UBERON:0009142!3.85e-12!238;UBERON:0000481!2.18e-11!347;UBERON:0000914!1.31e-09!83;UBERON:0002329!1.31e-09!83;UBERON:0003077!1.31e-09!83;UBERON:0003059!1.31e-09!83;UBERON:0007282!1.31e-09!83;UBERON:0009618!1.31e-09!83;UBERON:0007285!1.31e-09!83;UBERON:0000486!6.31e-09!82;UBERON:0003102!1.02e-08!95;UBERON:0000468!1.95e-08!659;UBERON:0004290!2.00e-08!70;UBERON:0000119!1.92e-07!312;UBERON:0000483!2.25e-07!309;UBERON:0002385!2.99e-07!63;UBERON:0001015!2.99e-07!63;UBERON:0000383!2.99e-07!63;UBERON:0001134!3.87e-07!61;UBERON:0002036!3.87e-07!61;UBERON:0003082!3.87e-07!61;UBERON:0001444!5.57e-07!48 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.94e-12,199;UBERON:0003104,5.41e-11,160;UBERON:0009142,5.41e-11,160;UBERON:0007503,6.59e-10,78;UBERON:0005256,9.27e-10,122;UBERON:0003102,2.41e-09,99;UBERON:0000486,5.40e-09,83;UBERON:0002329,1.52e-08,71;UBERON:0003059,1.52e-08,71;UBERON:0007282,1.52e-08,71;UBERON:0004290,1.52e-08,71;UBERON:0009618,1.52e-08,71;UBERON:0007524,2.01e-08,73;UBERON:0003077,3.60e-08,72;UBERON:0007285,3.60e-08,72;UBERON:0000119,1.67e-07,309;UBERON:0000483,1.96e-07,306;UBERON:0002385,2.31e-07,64;UBERON:0001015,2.31e-07,64;UBERON:0000383,2.31e-07,64;UBERON:0001134,2.99e-07,62;UBERON:0002036,2.99e-07,62;UBERON:0003082,2.99e-07,62;UBERON:0000490,3.08e-07,148;UBERON:0001048,5.13e-07,160;UBERON:0001444,6.86e-07,49 | |||
|phase1_expression=44.6928813005569,45.6034115887794,40.7358227837357,39.0285863577209,33.5220820820466,59.3190196388251,17.7309914717817,3.79031924056099,8.09675447419499,21.6245864121328,30.0054502228144,26.2129646556207,30.8607364527291,10.0250745897638,8.28493439319789,11.4295274896802,15.6700577286234,18.9880623500717,18.0535135552488,33.6120488549631,26.9280912442414,24.4494682752909,16.8879232407323,11.4974517061223,16.9482563452984,0.0764134057479513,0,0.157421562627358,0,0.383829398097213,0.464448369948228,16.5495820406207,13.253060426243,20.7062245693401,0,0,19.6712294354348,0.553995408531877,0.601633342410425,0.217010870715852,1.56740831967947,1.29557466407592,1.54545340580512,0.436194716338694,1.13362783106643,0.485168122375632,0.464858073811369,0.822335776043652,1.23882548358041,0.28769239232215,1.2808035326455,0,1.03423704220986,0,0,0.376484679085209,0.545812300115692,0.674170453335254,0.612167784741805,0.320929027076094,0,0,0.797854630486527,0.426224750532694,1.16083695451434,0,0,0.75374599577023,1.0429658368404,0.434377689410233,1.81619850790011,1.47311054395026,0,0,0.425208599930087,0,0,0.450530678524519,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,13.2171328579026,7.8471198817415,16.3298132560548,1.180258620683,0.393010762749165,0.616804496998528,0.334372990781356,4.23698946623668,4.2610302516126,1.94826728407911,1.00269411196656,6.48132996444642,9.96902525626295,7.31170432165542,2.30564375506215,1.56071217071854,2.46656856905514,0.829050053357545,0.579606171470105,0,0,0,0.453237370790265,0.383220493601921,1.71813722741315,0,0.95569624297229,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,31.694892620815,16.7675214925909,21.6087729515566,18.7948359239974,19.5521785147997,15.643424047769,18.2915767821753,15.0856809793817,14.8419662947587,22.1729397462564,18.6209745669427,7.26933869012305,40.0724817121796,24.1009887809879,6.81549526674835,13.5821195093428,8.90818335476397,0.953962497221368,0,0,13.1183188862025,27.527507043396,17.0098845787721,13.0020826642522,12.1654836500873,10.4544855937226,9.40477349415648,18.089173141853,20.2786769731425,10.3763389957048,13.696196781711,6.84244895146661,22.9418334095279,15.0741862941806,6.48113558305408,11.9661635900667,13.4717623575702,15.3151613457318,7.66583187329416,13.2897192339538,8.42728022079873,0,0,40.1206527971132,31.8062049085004,15.7021834464079,14.8298282510805,19.7917268316681,12.0587249947441,25.7911696065461,24.5522690178321,44.646826263506,15.8717628053881,9.42974704487816,9.15386657435369,11.5031645010148,6.33793516927999,28.1185718200556,12.1742429963825,18.8255701109668,17.7843929856643,13.7398363413205,14.2448191043956,13.6237282501181,16.3323337003915,18.9164848660123,17.2554054563528,49.8961200058462,49.7006527849899,21.8438726865126,31.6191982399145,13.1302168884172,13.2625631064282,18.8403598529244,42.5808292254413,46.279657165652,49.1278452624571,16.9013952908431,28.5229520745291,38.2267725985236,33.9091041855299,52.5159418147704,31.5340739469623,35.0391134462056,50.6237849221924,47.9324783565196,39.8517351109302,26.7579800698761,41.514504287677,10.9919318636792,79.5221487237216,47.8572466581291,33.9121184620975,18.9395636100031,21.8196896472668,15.7742527463952,8.53815942907168,9.67467308746842,7.08783051504062,9.22583389636797,9.84051318414951,7.2995471815166,42.2413737290503,49.5295522408522,52.4912701139426,19.0390850493111,19.4907460050788,29.576700009961,31.1881676644488,32.2954780043866,28.2352570194929,26.799171623366,29.6588273888871,27.6404181728337,30.4143270944286,29.6255310848721,19.9301972748655,25.2435192846202,40.7458271218086,54.3932232126505,0,3.9313088667105,1.18157981336281,8.38779888887836,13.4057398011994,21.9606797182113,17.011294238337,19.1082980537953,22.0158449581472,22.4989921735227,23.1323896770331,21.8386304908711,21.649701303791,14.0275790019843,36.5141039073405,11.693682268647,9.25971025153221,7.03940363268014,11.0628615714299,10.3018339451385,4.43190610957315,9.82817913584798,6.53977114070404,27.1828118561653,19.14996261467,14.8863852104506,21.4940454486836,17.7286702493517,15.3353071666084,8.37527504423104,12.4148291958649,20.940139669618,15.5649549690318,25.3747291187024,25.9706387654971,24.829247661288,23.4434894420094,15.3965201420435,25.8097006685342,40.5463128089289,39.4440477030198,16.3711383144227,10.0270815831654,14.3009657350853,33.6106460970222,57.2250313363012,11.834238535784,53.1876233169741,55.123941563024,16.7184793270392,18.4403871630262,12.7882645927728,18.1582051945847,27.6737018749636,30.4598924608884,10.4235578973995,14.5710698984444,22.9666043150694,47.0245428212954,51.4204740574174,49.08673867039,7.29742683847143,5.02257091432126,12.6500363689819,49.8419699422492,40.2016775419399,15.690059554479,38.9461714935788,25.4790639962475,43.3327531040547,0.784596007954691,0.591092280605782,1.07813787429759,0.128343036279748,18.0407183197949,7.8083912314573,6.186310502221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| |||
|short_description=p2@PTPLA | |||
}} |
Revision as of 02:00, 11 January 2014
Short description: | p2@PTPLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTPLA_5end |
Coexpression cluster: | C3003_mesothelioma_heart_basal_Fibroblast_Melanocyte_Mesenchymal_Retinal |
Association with transcript: | 0bp_to_ENST00000326961, ENST00000361271, NM_014241, uc001ipg.2, uc001iph.1, uc001ipi.2_5end |
EntrezGene: | PTPLA |
HGNC: | 9639 |
UniProt: | A6NP58B0YJ81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.54e-15 | 250 |
fibroblast | 1.26e-12 | 76 |
epithelial cell | 7.51e-12 | 253 |
mesodermal cell | 4.19e-09 | 121 |
Ontology term | p-value | n |
---|---|---|
trunk | 5.94e-12 | 199 |
mesenchyme | 5.41e-11 | 160 |
entire embryonic mesenchyme | 5.41e-11 | 160 |
epithelial vesicle | 6.59e-10 | 78 |
trunk mesenchyme | 9.27e-10 | 122 |
surface structure | 2.41e-09 | 99 |
multilaminar epithelium | 5.40e-09 | 83 |
somite | 1.52e-08 | 71 |
presomitic mesoderm | 1.52e-08 | 71 |
presumptive segmental plate | 1.52e-08 | 71 |
dermomyotome | 1.52e-08 | 71 |
trunk paraxial mesoderm | 1.52e-08 | 71 |
dense mesenchyme tissue | 2.01e-08 | 73 |
paraxial mesoderm | 3.60e-08 | 72 |
presumptive paraxial mesoderm | 3.60e-08 | 72 |
cell layer | 1.67e-07 | 309 |
epithelium | 1.96e-07 | 306 |
muscle tissue | 2.31e-07 | 64 |
musculature | 2.31e-07 | 64 |
musculature of body | 2.31e-07 | 64 |
skeletal muscle tissue | 2.99e-07 | 62 |
striated muscle tissue | 2.99e-07 | 62 |
myotome | 2.99e-07 | 62 |
unilaminar epithelium | 3.08e-07 | 148 |
primordium | 5.13e-07 | 160 |
subdivision of head | 6.86e-07 | 49 |