FFCP PHASE1:Hg19::chr10:54074033..54074050,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2891 | |||
|TSSclassifier=strong | |||
|UniProt=O94907 | |||
|association_with_transcript=0bp_to_NM_012242,uc001jjr.2_5end | |||
|coexpression_cluster_id=C3025 | |||
|description=CAGE_peak_1_at_DKK1_5end | |||
|id=chr10:54074033..54074050,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.40e-28!180;CL:0000220!6.10e-26!246;CL:0002321!1.06e-25!248;CL:0000222!3.93e-18!119;CL:0000066!1.19e-17!254;CL:0000057!9.24e-16!75;CL:0000548!1.44e-13!679;CL:0000004!1.44e-13!679;CL:0000255!1.44e-13!679;CL:0000012!7.05e-13!682;CL:0000076!8.95e-12!62;CL:0002620!8.67e-11!23;CL:0000680!2.39e-10!57;CL:0000056!2.39e-10!57;CL:0000355!2.39e-10!57;CL:0000192!5.64e-10!42;CL:0000514!5.64e-10!42;CL:0000359!4.94e-09!32;CL:0000187!5.69e-09!54;CL:0000183!1.23e-08!59;CL:0000213!3.70e-08!57;CL:0000215!3.70e-08!57;CL:0000393!5.69e-08!60;CL:0000211!5.69e-08!60;CL:0000144!4.89e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.54e-11;23!CL:0000359;1.07e-08;32!CL:0000192;1.45e-07;43!CL:0000057;5.65e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.66e-26,250;CL:0000222,1.38e-18,121;CL:0000066,2.35e-17,253;CL:0000057,1.80e-16,76;CL:0000076,2.77e-12,63;CL:0002620,4.52e-11,23;CL:0000680,1.66e-10,58;CL:0000056,1.66e-10,58;CL:0000355,1.66e-10,58;CL:0000192,4.41e-10,43;CL:0000514,4.41e-10,43;CL:0000359,2.91e-09,32;CL:0000187,4.21e-09,55;CL:0000213,2.20e-08,58;CL:0000215,2.20e-08,58;CL:0000393,1.04e-07,61;CL:0000211,1.04e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.45e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.11e-19!365;UBERON:0002100!4.12e-16!216;UBERON:0000490!2.88e-14!138;UBERON:0003102!1.32e-13!95;UBERON:0000468!9.25e-13!659;UBERON:0002049!1.45e-12!79;UBERON:0007798!1.45e-12!79;UBERON:0000055!3.73e-12!69;UBERON:0003104!4.44e-12!238;UBERON:0009142!4.44e-12!238;UBERON:0001981!4.51e-12!60;UBERON:0007500!4.51e-12!60;UBERON:0004537!4.51e-12!60;UBERON:0006965!4.51e-12!60;UBERON:0004872!4.84e-12!84;UBERON:0001637!4.94e-12!42;UBERON:0003509!4.94e-12!42;UBERON:0004572!4.94e-12!42;UBERON:0005256!5.45e-12!143;UBERON:0003914!1.16e-11!118;UBERON:0000486!2.80e-11!82;UBERON:0000119!5.32e-11!312;UBERON:0000483!8.79e-11!309;UBERON:0000481!2.21e-10!347;UBERON:0002199!3.22e-10!45;UBERON:0002416!3.22e-10!45;UBERON:0000914!1.00e-09!83;UBERON:0002329!1.00e-09!83;UBERON:0003077!1.00e-09!83;UBERON:0003059!1.00e-09!83;UBERON:0007282!1.00e-09!83;UBERON:0009618!1.00e-09!83;UBERON:0007285!1.00e-09!83;UBERON:0002097!1.99e-09!40;UBERON:0004290!3.77e-09!70;UBERON:0004573!4.99e-09!33;UBERON:0004571!4.99e-09!33;UBERON:0000467!9.04e-09!625;UBERON:0001134!1.22e-08!61;UBERON:0002036!1.22e-08!61;UBERON:0003082!1.22e-08!61;UBERON:0000480!1.49e-08!626;UBERON:0002385!4.09e-08!63;UBERON:0001015!4.09e-08!63;UBERON:0000383!4.09e-08!63;UBERON:0000477!1.20e-07!286;UBERON:0004923!1.24e-07!57;UBERON:0004111!3.46e-07!241;UBERON:0004119!5.81e-07!169;UBERON:0000925!5.81e-07!169;UBERON:0006595!5.81e-07!169;UBERON:0004535!6.57e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.36e-09;42!UBERON:0003509;5.36e-09;42!UBERON:0004572;5.36e-09;42!UBERON:0007500;1.83e-08;56!UBERON:0001981;1.83e-08;56!UBERON:0004537;1.83e-08;56!UBERON:0004573;3.95e-08;33!UBERON:0004571;3.95e-08;33!UBERON:0002199;1.03e-07;46!UBERON:0002416;1.03e-07;46!UBERON:0002097;1.32e-07;41!UBERON:0000055;1.79e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.99e-15,199;UBERON:0000490,4.05e-15,148;UBERON:0003102,3.32e-14,99;UBERON:0002049,1.82e-12,78;UBERON:0007798,1.82e-12,78;UBERON:0000055,4.27e-12,68;UBERON:0001637,4.92e-12,42;UBERON:0003509,4.92e-12,42;UBERON:0004572,4.92e-12,42;UBERON:0007500,6.19e-12,59;UBERON:0001981,6.19e-12,59;UBERON:0004537,6.19e-12,59;UBERON:0006965,6.19e-12,59;UBERON:0003914,6.33e-12,117;UBERON:0004872,1.07e-11,83;UBERON:0005256,1.10e-11,122;UBERON:0000486,3.14e-11,83;UBERON:0002199,8.04e-11,46;UBERON:0002416,8.04e-11,46;UBERON:0002097,5.27e-10,41;UBERON:0007503,6.02e-10,78;UBERON:0003104,2.65e-09,160;UBERON:0009142,2.65e-09,160;UBERON:0002329,3.21e-09,71;UBERON:0003059,3.21e-09,71;UBERON:0007282,3.21e-09,71;UBERON:0004290,3.21e-09,71;UBERON:0009618,3.21e-09,71;UBERON:0004573,5.91e-09,33;UBERON:0004571,5.91e-09,33;UBERON:0007524,8.46e-09,73;UBERON:0003077,8.93e-09,72;UBERON:0007285,8.93e-09,72;UBERON:0001134,1.10e-08,62;UBERON:0002036,1.10e-08,62;UBERON:0003082,1.10e-08,62;UBERON:0000119,1.56e-08,309;UBERON:0000483,2.45e-08,306;UBERON:0002385,4.75e-08,64;UBERON:0001015,4.75e-08,64;UBERON:0000383,4.75e-08,64;UBERON:0004923,7.29e-08,66;UBERON:0004535,2.32e-07,109;UBERON:0001009,9.85e-07,112 | |||
|phase1_expression=2103.65395357378,526.687288771819,668.123875414903,941.689737502957,158.671188521687,423.956522712779,108.918947612374,121.921935571378,13.3204670381918,259.495036945593,300.752303396116,8.08233076881637,13.4521158896511,18.688719296967,24.1920084281379,20.842079540005,20.4916139528152,28.4820935251076,25.3725055371064,28.440964415738,41.0041389400949,1.25381888591235,8.01460763966959,66.247221735276,20.0868223351684,0.0764134057479513,0,0,0,0,1.70297735647684,136.074341222881,188.856111073963,78.7576041655258,0,0,0,1.66198622559563,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.894334546747,74.4477954271036,29.664114347699,202.044486182973,83.2220931655577,141.804742062646,5.5670016293577,22.8718389042239,22.31021685072,35.0332447990851,25.2085834939272,1.11332214173056,25.500670180478,10.7527488407485,0,0,0,0,0,0,115.480958680056,82.5825211301879,62.485290289367,112.496280442878,47.4034362917194,228.623092852196,226.968533658976,27.6505932311182,75.0666814268959,30.1248551488203,17.7244899528025,68.4244895146661,8.54217201418593,144.123927495581,339.449476162457,67.8677934959006,36.1492289928133,62.3867601877605,162.515635713836,145.237645913924,47.6324534219059,0,0,41.4289349535408,164.49771601115,164.999556698947,468.066454174729,412.757897257543,148.251383758913,104.846711226611,30.9572087616144,55.9935334906953,65.9767395047505,83.2511953390672,66.2020707609508,12.7140239221742,14.404398112,113.645894439391,13.4228833037038,82.1479423024007,95.0493608309455,71.9873476686279,66.0441613021977,62.9219614026073,41.2391425934884,122.834317311768,34.0975077880026,38.0160914330257,23.98489214002,107.399040708687,119.290611541496,52.3525314397146,38.6616226404369,94.7559274955906,24.5827467693269,39.8434134538726,35.3059438430502,210.416699761839,2847.81046656068,468.1177962903,294.585342611791,2908.18281215394,303.489698607203,2530.54538432817,2482.42662975075,3694.34513642908,2476.06917515638,954.199666642753,356.141057847056,73.3873097957406,4916.88285635511,2300.77491512639,1178.27655596558,159.826725566046,174.012024936953,174.090389401125,6.34263271873896,3.31324420803713,11.6193942869518,25.6042805887965,14.8869302016621,6.20461510428911,4.69348596989448,9.00537313470039,67.6861114627155,401.678257747662,566.675393110625,65.6602740221134,63.8935975396005,98.3325001924607,85.0366529766757,85.4087420842232,106.297237361771,42.606693378612,40.814064746072,54.249349129441,24.3591300026134,91.1571529722398,40.3342531104772,13.2307840246988,0,0,0,0,870.020214253985,35.8576723523918,45.6561187299882,304.608751328149,171.401897961831,50.4607026113986,146.287929084336,42.6373261964627,49.0726562885929,259.104455119297,40.5059995113585,46.0528968357825,49.0764643331207,29.4893935963627,736.470498898044,673.911637244475,0,0,0,309.321652156364,20.8297838966586,90.8778373323697,322.410681730254,266.801955555817,777.500073347048,0,0,0,0,0,15.3664904187049,53.0963911526006,2.34434894420094,56.4539071874927,34.4472100556134,58.5668962795639,9.1464458441785,41.3763701234381,24.4137638546637,48.476606927648,708.409002352622,200.287609677054,25.35908257668,287.74504214483,614.683952146174,79.9914933955262,241.143524439573,99.109050593989,57.191197463259,341.851611396609,233.800255645738,27.3618394806737,44.7793855415608,186.900642012289,69.933935477824,142.931487210448,53.5855232735826,0,0,0,41.934349711027,31.0127226752108,62.7602382179161,751.125418991401,694.715446542846,790.016969814419,0,0,0,0,4.06551398755941,0,17.785642693887,15.7465289414288,8.93114252314428,0,0,0,5.03035116048474,10.0034104211935,14.6483112797857,136.63685602574,358.820696471092,193.18545841657,100.858758308726,56.5778667488112,70.4963262573553,190.390451178209,109.597223758347,83.5192333493915,607.837766818708,1.95801157462741,1.37257369524342,0,0,0,8.79069957194152,106.518681286718,28.1222972796603,914.277271812193,441.663559123044,735.610107509086,438.235890454497,870.414030662463,927.162001471754,921.676192623394,98.3857846460942,130.685429830462,73.0110416962763,94.504306111419,164.437685520842,740.747566547053,89.6263922255683,99.5395490397039,227.906679606744,367.095794701542,130.993290544465,43.7663624520189,13.0155919706461,10.1965469992991,40.918982902913,2.53323909342902,29.5706798584331,83.6861029960457,55.0585586060455,46.2681758070868,53.9183410712267,10.0337954770971,9.17554582962138,14.1282921517883,15.2234833211081,0,0,18.46440900838,161.055191038556,211.821334926461,17.1048079335219,84.6101854921493,123.021664381597,5.16838984196555,14.95138565884,122.119786681561,2.41676795730305,13.0941324547448,8.289198435211,12.8188012410613,22.773091912074,8.26595155311102,7.84084972228128,3.20515328328254,25.2885920502296,7.30322255987403,38.7942645983536,28.9311253246873,98.5472564510246,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| |||
|short_description=p1@DKK1 | |||
}} |
Revision as of 02:51, 11 January 2014
Short description: | p1@DKK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DKK1_5end |
Coexpression cluster: | C3025_Fibroblast_gastric_astrocytoma_glioblastoma_colon_Adipocyte_mesothelioma |
Association with transcript: | 0bp_to_NM_012242, uc001jjr.2_5end |
EntrezGene: | DKK1 |
HGNC: | 2891 |
UniProt: | O94907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.66e-26 | 250 |
mesodermal cell | 1.38e-18 | 121 |
epithelial cell | 2.35e-17 | 253 |
fibroblast | 1.80e-16 | 76 |
squamous epithelial cell | 2.77e-12 | 63 |
skin fibroblast | 4.52e-11 | 23 |
muscle precursor cell | 1.66e-10 | 58 |
myoblast | 1.66e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.66e-10 | 58 |
smooth muscle cell | 4.41e-10 | 43 |
smooth muscle myoblast | 4.41e-10 | 43 |
vascular associated smooth muscle cell | 2.91e-09 | 32 |
muscle cell | 4.21e-09 | 55 |
lining cell | 2.20e-08 | 58 |
barrier cell | 2.20e-08 | 58 |
electrically responsive cell | 1.04e-07 | 61 |
electrically active cell | 1.04e-07 | 61 |