FFCP PHASE1:Hg19::chr10:105830210..105830215,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C640 | |||
|description=CAGE_peak_at_chr10:105830210..105830215,- | |||
|id=chr10:105830210..105830215,- | |||
|ontology_enrichment_celltype=CL:0002076!5.57e-18!43;CL:0000244!1.69e-15!4;CL:0000731!1.69e-15!4;CL:0000066!3.22e-14!254;CL:0000622!6.06e-13!5;CL:0002623!1.24e-12!3;CL:0000223!4.70e-12!59;CL:0002541!9.90e-12!3;CL:0000154!8.76e-11!6;CL:0002251!3.83e-10!21;CL:0002159!1.61e-09!13;CL:0002368!3.65e-09!13;CL:0002536!4.80e-08!2;CL:0000150!3.59e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000622;4.04e-53;5!CL:0002623;2.42e-50;3!CL:0000154;2.28e-44;6!CL:0000150;9.18e-30;9!CL:0002231;4.35e-23;3!CL:0002537;4.11e-14;5!CL:0002251;1.27e-13;20!CL:0002076;3.31e-12;42!CL:0000047;1.51e-09;2!CL:0000317;1.51e-09;2!CL:1000448;1.51e-09;2!CL:0002308;1.51e-09;2!CL:0002140;1.51e-09;2!CL:0000349;1.74e-08;19!CL:0000151;4.26e-08;36!CL:0002541;5.80e-07;3!CL:0002621;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,4.63e-53,5;CL:0002623,2.23e-50,3;CL:0000154,2.55e-44,6;CL:0000150,9.90e-30,9;CL:0002231,5.76e-23,3;CL:0002537,3.15e-14,5;CL:0002076,5.27e-14,42;CL:0002251,1.40e-13,20;CL:0000223,4.33e-10,58;CL:0000317,1.71e-09,2;CL:1000448,1.71e-09,2;CL:0002308,1.71e-09,2;CL:0002140,1.71e-09,2;CL:0000349,1.57e-08,19;CL:0000151,1.09e-07,36;CL:0002541,5.80e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.12e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.17e-19!14;UBERON:0000158!1.17e-19!14;UBERON:0003124!8.53e-13!7;UBERON:0000365!2.09e-12!5;UBERON:0000476!9.90e-12!3;UBERON:0000920!9.90e-12!3;UBERON:0000478!9.46e-11!24;UBERON:0001044!1.46e-10!6;UBERON:0003293!1.46e-10!6;UBERON:0003294!1.46e-10!6;UBERON:0010047!1.46e-10!6;UBERON:0000167!1.46e-10!6;UBERON:0005910!2.43e-10!6;UBERON:0000166!3.42e-10!21;UBERON:0000165!3.18e-09!28;UBERON:0000930!3.18e-09!28;UBERON:0000161!7.44e-09!35;UBERON:0004119!7.84e-09!169;UBERON:0000925!7.84e-09!169;UBERON:0006595!7.84e-09!169;UBERON:0000305!9.89e-09!7;UBERON:0001004!7.42e-08!72;UBERON:0004871!1.22e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.35e-25;6!UBERON:0003293;1.35e-25;6!UBERON:0003294;1.35e-25;6!UBERON:0010047;1.35e-25;6!UBERON:0003408;1.35e-25;6!UBERON:0000167;1.35e-25;6!UBERON:0005631;1.42e-15;10!UBERON:0000158;1.42e-15;10!UBERON:0000161;2.53e-14;19!UBERON:0000166;2.53e-14;19!UBERON:0001041;2.32e-11;14!UBERON:0000305;2.35e-10;7!UBERON:0000165;8.03e-10;28!UBERON:0002419;1.51e-09;2!UBERON:0007771;1.51e-09;2!UBERON:0003297;1.51e-09;2!UBERON:0001821;1.51e-09;2!UBERON:0003487;1.51e-09;2!UBERON:0001820;1.51e-09;2!UBERON:0002365;3.48e-09;31!UBERON:0002330;3.48e-09;31!UBERON:0002367;5.55e-07;11!UBERON:0010147;5.55e-07;11!UBERON:0003124;5.80e-07;3!UBERON:0000920;5.80e-07;3!UBERON:0000478;7.93e-07;24!UBERON:0001949;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.30e-25,6;UBERON:0003293,1.30e-25,6;UBERON:0003294,1.30e-25,6;UBERON:0010047,1.30e-25,6;UBERON:0000167,1.30e-25,6;UBERON:0000161,2.32e-16,36;UBERON:0003408,1.17e-15,10;UBERON:0000166,2.23e-12,22;UBERON:0005631,2.28e-11,14;UBERON:0000158,2.28e-11,14;UBERON:0000305,1.94e-10,7;UBERON:0002530,6.26e-10,59;UBERON:0002419,1.71e-09,2;UBERON:0007771,1.71e-09,2;UBERON:0003297,1.71e-09,2;UBERON:0001821,1.71e-09,2;UBERON:0003487,1.71e-09,2;UBERON:0001820,1.71e-09,2;UBERON:0005089,1.71e-09,2;UBERON:0005088,1.71e-09,2;UBERON:0000165,1.83e-09,29;UBERON:0000930,1.83e-09,29;UBERON:0004871,3.01e-09,8;UBERON:0002365,6.88e-09,31;UBERON:0002330,6.88e-09,31;UBERON:0003102,8.98e-08,99;UBERON:0000920,5.80e-07,3;UBERON:0002367,5.98e-07,11;UBERON:0010147,5.98e-07,11;UBERON:0009846,5.98e-07,11;UBERON:0003353,5.98e-07,11;UBERON:0004902,5.98e-07,11;UBERON:0003820,5.98e-07,11;UBERON:0009847,5.98e-07,11;UBERON:0000478,7.32e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.502644862058154,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,1.19705285616665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,1.68471475667626,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,1.53580351049616,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0.957003479195758,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07216164163037,2.56077715640925,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:105830210..105830215,- | |||
}} |
Revision as of 04:50, 11 January 2014
Short description: | p@chr10:105830210..105830215, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:105830210..105830215, - |
Coexpression cluster: | C640_amniotic_salivary_chorionic_Keratinocyte_Urothelial_Prostate_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 4.63e-53 | 5 |
acinar cell of salivary gland | 2.23e-50 | 3 |
protein secreting cell | 2.55e-44 | 6 |
glandular epithelial cell | 9.90e-30 | 9 |
epithelial cell of prostate | 5.76e-23 | 3 |
amnion mesenchymal stem cell | 3.15e-14 | 5 |
endo-epithelial cell | 5.27e-14 | 42 |
epithelial cell of alimentary canal | 1.40e-13 | 20 |
endodermal cell | 4.33e-10 | 58 |
sebum secreting cell | 1.71e-09 | 2 |
epithelial cell of sweat gland | 1.71e-09 | 2 |
epithelial cell of skin gland | 1.71e-09 | 2 |
acinar cell of sebaceous gland | 1.71e-09 | 2 |
extraembryonic cell | 1.57e-08 | 19 |
secretory cell | 1.09e-07 | 36 |
chorionic membrane mesenchymal stem cell | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.30e-25 | 6 |
gland of oral region | 1.30e-25 | 6 |
gland of foregut | 1.30e-25 | 6 |
oral gland | 1.30e-25 | 6 |
oral cavity | 1.30e-25 | 6 |
orifice | 2.32e-16 | 36 |
gland of gut | 1.17e-15 | 10 |
oral opening | 2.23e-12 | 22 |
extraembryonic membrane | 2.28e-11 | 14 |
membranous layer | 2.28e-11 | 14 |
amnion | 1.94e-10 | 7 |
gland | 6.26e-10 | 59 |
skin gland | 1.71e-09 | 2 |
epidermis gland | 1.71e-09 | 2 |
gland of integumental system | 1.71e-09 | 2 |
sebaceous gland | 1.71e-09 | 2 |
skin sebaceous gland | 1.71e-09 | 2 |
sweat gland | 1.71e-09 | 2 |
sweat gland placode | 1.71e-09 | 2 |
sebaceous gland placode | 1.71e-09 | 2 |
mouth | 1.83e-09 | 29 |
stomodeum | 1.83e-09 | 29 |
somatic layer of lateral plate mesoderm | 3.01e-09 | 8 |
exocrine gland | 6.88e-09 | 31 |
exocrine system | 6.88e-09 | 31 |
surface structure | 8.98e-08 | 99 |
egg chorion | 5.80e-07 | 3 |
prostate gland | 5.98e-07 | 11 |
male accessory sex gland | 5.98e-07 | 11 |
embryonic cloacal epithelium | 5.98e-07 | 11 |
epithelium of hindgut | 5.98e-07 | 11 |
urogenital sinus epithelium | 5.98e-07 | 11 |
prostate bud | 5.98e-07 | 11 |
prostate field | 5.98e-07 | 11 |
extraembryonic structure | 7.32e-07 | 24 |