FFCP PHASE1:Hg19::chr11:101918153..101918198,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28188 | |||
|TSSclassifier=strong | |||
|UniProt=E9PE73,Q9BRQ4,E9PM77,E9PJU1,Q7Z2V0 | |||
|association_with_transcript=0bp_to_ENST00000393209,ENST00000434758,ENST00000526781,ENST00000530659,ENST00000534360,NM_001195005,NM_032930,uc001pgo.2,uc001pgp.2,uc001pgq.2_5end | |||
|description=CAGE_peak_1_at_C11orf70_5end | |||
|id=chr11:101918153..101918198,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-23!180;CL:0000057!8.46e-15!75;CL:0000680!5.29e-08!57;CL:0000056!5.29e-08!57;CL:0000355!5.29e-08!57;CL:0000183!1.69e-07!59;CL:0000393!1.85e-07!60;CL:0000211!1.85e-07!60;CL:0000187!2.22e-07!54;CL:0002620!5.63e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.65e-07;23!CL:0000723;6.04e-07;61!CL:0000048;8.76e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.98e-15,76;CL:0000680,1.85e-08,58;CL:0000056,1.85e-08,58;CL:0000355,1.85e-08,58;CL:0000393,6.85e-08,61;CL:0000211,6.85e-08,61;CL:0000187,8.13e-08,55;CL:0002620,4.27e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.85e-17!365;UBERON:0000481!7.63e-12!347;UBERON:0000468!1.29e-10!659;UBERON:0000914!2.00e-10!83;UBERON:0002329!2.00e-10!83;UBERON:0003077!2.00e-10!83;UBERON:0003059!2.00e-10!83;UBERON:0007282!2.00e-10!83;UBERON:0009618!2.00e-10!83;UBERON:0007285!2.00e-10!83;UBERON:0000486!5.30e-10!82;UBERON:0003102!1.96e-09!95;UBERON:0002100!2.60e-09!216;UBERON:0000119!6.89e-09!312;UBERON:0000483!9.30e-09!309;UBERON:0004290!1.25e-08!70;UBERON:0005256!1.47e-08!143;UBERON:0000924!4.48e-08!173;UBERON:0006601!4.48e-08!173;UBERON:0004923!1.68e-07!57;UBERON:0005156!2.40e-07!59;UBERON:0000990!2.40e-07!59;UBERON:0001134!3.17e-07!61;UBERON:0002036!3.17e-07!61;UBERON:0003082!3.17e-07!61;UBERON:0002385!4.14e-07!63;UBERON:0001015!4.14e-07!63;UBERON:0000383!4.14e-07!63;UBERON:0004121!6.46e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.63e-10,83;UBERON:0003102,1.46e-09,99;UBERON:0002329,6.68e-09,71;UBERON:0003059,6.68e-09,71;UBERON:0007282,6.68e-09,71;UBERON:0004290,6.68e-09,71;UBERON:0009618,6.68e-09,71;UBERON:0007524,7.94e-09,73;UBERON:0003077,9.52e-09,72;UBERON:0007285,9.52e-09,72;UBERON:0004923,2.83e-08,66;UBERON:0000119,3.36e-08,309;UBERON:0000483,4.50e-08,306;UBERON:0004121,7.98e-08,171;UBERON:0000924,7.98e-08,171;UBERON:0006601,7.98e-08,171;UBERON:0003104,1.05e-07,160;UBERON:0009142,1.05e-07,160;UBERON:0007503,1.41e-07,78;UBERON:0001134,1.83e-07,62;UBERON:0002036,1.83e-07,62;UBERON:0003082,1.83e-07,62;UBERON:0005256,2.48e-07,122;UBERON:0002100,2.74e-07,199;UBERON:0005156,3.64e-07,59;UBERON:0000990,3.64e-07,59;UBERON:0002385,3.70e-07,64;UBERON:0001015,3.70e-07,64;UBERON:0000383,3.70e-07,64 | |||
|phase1_expression=13.8075568245623,10.0627246228762,17.6193005119964,12.0087958023756,9.38618298297304,23.55314015071,5.06599756336621,8.84407822797563,5.74608382039645,8.60068777755281,4.88460817580699,8.95609625733706,10.0231451726812,10.7676727075241,12.5931002776608,2.6893005858071,6.02694528023977,2.92124036154949,4.39139518911456,12.0658636915252,5.71201935483908,11.2843699732112,22.3264069962224,9.30746090495612,11.6754654823167,0,0,0,0,0,0.619264493264304,9.19421224478927,0.90361775633475,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,7.31420598941885,9.38981203585091,14.5763320501625,24.9393015145351,17.0454889616202,20.2785126545153,9.54343136461319,15.0856809793817,9.73708616789899,7.09534071880205,7.02678285545008,38.1804005075832,9.83597278389864,10.7527488407485,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.357198913136319,0,0.225222960966644,0,0,0.366403487860815,0,0,11.3384453557059,17.3940183093361,11.9032680964705,9.79827938017819,10.0392817262085,8.15737279056221,5.04609840128076,2.1349799145941,2.22000793575444,7.78027588499416,6.87024427555409,5.06731899651722,6.50836938873205,5.18558332031999,16.8711430920334,11.5499228427219,7.41613368007784,11.0592023608333,8.22041490506354,8.57926605151097,7.30344194851692,11.8409419327838,9.08973948107083,16.9454281128255,10.6920257155385,8.90160945402805,12.7422590671324,16.5282172617735,7.74346124188705,6.13080747372624,9.97430815743058,9.65750765937843,11.9530240361618,12.7702350070607,6.23877007380116,6.81680615617675,22.209968437131,15.8948925869671,6.90209520994125,9.58388521917482,11.5938243020533,15.8199327881851,9.62025093775217,8.28214543870188,12.1168211637175,19.2384288162406,19.5591728750762,8.16522062788213,8.96693674225998,8.47802961552438,5.21804303540901,4.36393792945335,3.44165514466805,2.19552671033272,2.25300606146525,3.71820617182459,6.84162963101445,2.01856680700503,0,10.9514672630871,11.5783368874719,5.52539685409922,19.9678209053751,15.8813485967309,0.118306800039844,0.337169380156203,0,0,0,0.237270619111097,0.539325232640658,0,0,0,4.20725321410337,8.6430542379594,7.3504355692771,0,0,0,0,6.64137568132813,9.09309394582185,4.49976170175365,3.37205259772859,3.11639814476056,9.62919829648708,12.3807156017923,11.4392826380754,4.3299402607582,13.1001357621837,7.27933904262094,0.144366447761074,0,0.190254152234598,2.37061319387782,0,0,0,0,2.81201501960331,11.2548025893236,7.65585525108887,9.76187897461046,7.55648240136301,6.13412286664338,0,0,0,0,0,0.063497894292169,1.14596527667483,0,5.13217338068116,0.514137463516618,0.300343057843917,2.28661146104463,3.92458795208763,7.41132117016576,6.3070925806017,4.78305348303778,17.8828222925941,8.45302752556,9.30783408047047,8.32059495290929,7.71622122786426,4.25547396069835,7.72624319146688,10.4373935370448,8.68194568626309,4.11620168390384,14.0066559246306,10.6617584622764,5.543663110534,6.93310567237048,5.22920075160176,7.69792032101839,0,0,0,9.82461907515489,17.2292903751171,8.5582143024431,14.0437867467552,6.98619496671304,10.7436577943937,0,0,0,0,14.9915828291253,15.6167824629146,7.73288812777695,7.70574820538004,8.93114252314428,0,0,0,17.1768088406796,11.5039219843726,8.95174578209127,6.86303843051664,5.88815663030634,10.0929545621718,10.5427273493442,10.2321673907424,2.27407504055985,11.3820378421755,6.64225598535437,4.60922921354258,16.6816539778719,12.7270752350781,9.95115929051482,0,0.215714200818617,0,10.9125925720653,4.99306318531491,13.6075631998356,15.1345762769454,16.2669691685346,13.7523446272206,17.6832025972867,12.2809739776009,13.0291676126322,17.8101679733989,10.6404688723832,8.87808626565635,14.1258708343752,18.1739050214267,9.64546141217662,13.1736800054868,8.02025881213139,7.4585601038076,14.9258782613989,14.7493846085441,7.6052160676466,2.25599806453706,7.62451837333706,3.92174884588428,2.92278449306521,7.07195913582267,0,0,1.94324324491925,0,6.77366093859632,7.02365683396795,4.07802036872061,4.98645605357235,3.1342465661105,0,0,10.0015548795392,13.7766151193876,17.8958117065367,3.29731237272711,4.30376484646214,6.1882124940441,5.16838984196555,7.80072295243825,33.7436252672735,14.0172541523577,7.70243085573222,9.82423518247229,6.61615547925747,19.228223831421,14.9367194731655,6.47722368362367,5.9651463883314,11.7352289906294,6.1500821556834,7.01869918720213,3.74283789165535,10.2266020845403,8.18512101759664,10.455559052409,5.5446044431696,8.51689648507235,6.95946393660058,2.40921484835096,8.01499365755151,7.44316738719335,12.3387975640303,7.43457756302917,6.39744478278335,12.4102306529837,13.6827396608153,7.06453776179307,11.1520923701655,12.6287033678585,10.3674914064204,5.86329196562617,7.92551605865041,12.2164952309305,8.77740730361263,9.50482609562009,3.16950440270266,15.8339897233263,8.06010962136163,13.56097399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| |||
|short_description=p1@C11orf70 | |||
}} |
Revision as of 09:59, 11 January 2014
Short description: | p1@C11orf70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C11orf70_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393209, ENST00000434758, ENST00000526781, ENST00000530659, ENST00000534360, NM_001195005, NM_032930, uc001pgo.2, uc001pgp.2, uc001pgq.2_5end |
EntrezGene: | C11orf70 |
HGNC: | 28188 |
UniProt: | E9PE73Q9BRQ4E9PM77E9PJU1Q7Z2V0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.98e-15 | 76 |
muscle precursor cell | 1.85e-08 | 58 |
myoblast | 1.85e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-08 | 58 |
electrically responsive cell | 6.85e-08 | 61 |
electrically active cell | 6.85e-08 | 61 |
muscle cell | 8.13e-08 | 55 |
skin fibroblast | 4.27e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.63e-10 | 83 |
surface structure | 1.46e-09 | 99 |
somite | 6.68e-09 | 71 |
presomitic mesoderm | 6.68e-09 | 71 |
presumptive segmental plate | 6.68e-09 | 71 |
dermomyotome | 6.68e-09 | 71 |
trunk paraxial mesoderm | 6.68e-09 | 71 |
dense mesenchyme tissue | 7.94e-09 | 73 |
paraxial mesoderm | 9.52e-09 | 72 |
presumptive paraxial mesoderm | 9.52e-09 | 72 |
organ component layer | 2.83e-08 | 66 |
cell layer | 3.36e-08 | 309 |
epithelium | 4.50e-08 | 306 |
ectoderm-derived structure | 7.98e-08 | 171 |
ectoderm | 7.98e-08 | 171 |
presumptive ectoderm | 7.98e-08 | 171 |
mesenchyme | 1.05e-07 | 160 |
entire embryonic mesenchyme | 1.05e-07 | 160 |
epithelial vesicle | 1.41e-07 | 78 |
skeletal muscle tissue | 1.83e-07 | 62 |
striated muscle tissue | 1.83e-07 | 62 |
myotome | 1.83e-07 | 62 |
trunk mesenchyme | 2.48e-07 | 122 |
trunk | 2.74e-07 | 199 |
reproductive structure | 3.64e-07 | 59 |
reproductive system | 3.64e-07 | 59 |
muscle tissue | 3.70e-07 | 64 |
musculature | 3.70e-07 | 64 |
musculature of body | 3.70e-07 | 64 |