FFCP PHASE1:Hg19::chr12:6484243..6484261,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=117bp_to_ENST00000542436_5end | |||
|coexpression_cluster_id=C3316 | |||
|description=CAGE_peak_10_at_SCNN1A_5end | |||
|id=chr12:6484243..6484261,- | |||
|ontology_enrichment_celltype=CL:0000066!3.55e-16!254;CL:0000223!9.64e-09!59;CL:0002076!2.20e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000083;2.28e-11;4!CL:0002536;5.01e-11;2!CL:0000123;3.59e-10;2!CL:0000242;3.59e-10;2!CL:0002577;4.00e-07;3!CL:0002178;7.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.53e-11,4;CL:0002536,5.54e-11,2;CL:0000242,4.86e-10,2;CL:0000066,5.01e-08,253;CL:0002577,4.26e-07,3;CL:0002178,5.44e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.87e-17!106;DOID:0050687!2.50e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:1793;2.28e-11;4!DOID:4929;9.38e-11;2!DOID:4074;2.36e-10;2!DOID:4905;2.36e-10;2!DOID:3498;2.36e-10;2!DOID:3493;7.31e-10;2!DOID:299;2.85e-08;25!DOID:3119;5.62e-08;14!DOID:170;1.02e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1793,1.53e-11,4;DOID:4929,8.97e-11,2;DOID:4074,1.31e-10,2;DOID:4905,1.31e-10,2;DOID:3498,1.31e-10,2;DOID:3493,4.86e-10,2;DOID:305,5.15e-10,106;DOID:0050687,2.01e-09,143;DOID:299,2.19e-08,25;DOID:3119,4.20e-08,14;DOID:170,7.85e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.16e-20!169;UBERON:0000925!5.16e-20!169;UBERON:0006595!5.16e-20!169;UBERON:0004921!4.72e-19!129;UBERON:0004185!4.72e-19!129;UBERON:0000466!5.33e-19!126;UBERON:0000077!1.81e-18!130;UBERON:0000464!1.60e-17!104;UBERON:0001007!1.11e-16!155;UBERON:0001555!1.11e-16!155;UBERON:0007026!1.11e-16!155;UBERON:0005177!2.20e-15!107;UBERON:0001041!4.71e-15!98;UBERON:0005153!6.30e-12!37;UBERON:0006554!2.06e-11!44;UBERON:0005911!2.57e-11!82;UBERON:0001008!5.10e-11!45;UBERON:0000058!7.19e-11!26;UBERON:0000065!1.77e-10!53;UBERON:0003104!2.09e-10!238;UBERON:0009142!2.09e-10!238;UBERON:0001048!8.62e-10!168;UBERON:0005178!1.71e-09!34;UBERON:0002224!1.71e-09!34;UBERON:0002553!2.29e-09!70;UBERON:0001004!2.30e-09!72;UBERON:0005181!4.35e-09!35;UBERON:0008947!6.96e-09!38;UBERON:0003258!6.96e-09!38;UBERON:0009569!8.73e-09!113;UBERON:0000062!1.47e-08!511;UBERON:0002048!3.28e-08!22;UBERON:0000117!3.28e-08!22;UBERON:0000171!3.28e-08!22;UBERON:0000170!3.28e-08!22;UBERON:0005597!3.28e-08!22;UBERON:0000118!3.28e-08!22;UBERON:0000489!4.82e-08!32;UBERON:0005157!6.60e-08!51;UBERON:0000481!8.86e-08!347;UBERON:0000922!1.05e-07!612;UBERON:0002113!1.17e-07!27;UBERON:0003918!1.17e-07!27;UBERON:0005095!1.17e-07!27;UBERON:0007687!1.17e-07!27;UBERON:0000072!2.09e-07!46;UBERON:0003886!2.43e-07!63;UBERON:0005156!2.62e-07!59;UBERON:0000990!2.62e-07!59;UBERON:0003064!3.98e-07!37;UBERON:0003101!5.10e-07!22;UBERON:0000079!5.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.47e-08;5!UBERON:0010039;1.47e-08;5!UBERON:0001041;7.73e-08;14!UBERON:0001264;1.14e-07;10!UBERON:0006947;1.30e-07;3!UBERON:0004054;1.30e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.01e-07,10;UBERON:0006947,1.18e-07,3;UBERON:0004054,1.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,5.46103430325431,5.27533956456907,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23896306757121,0.871901815541886,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,3.32629322662648,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,2.04180339991335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.961416640147258,4.81239927631679,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,0,0,0,0,0,0,1.05562704063997,0.597743964753209,0,0,0.20453736500431,0,0,0.0898683511473268,0.358042349351218,0,0.591860433821602,0,0,0,0,0,0,0,0,1.2517279311405,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,1.9566461893209,4.85560759068186,5.52418163989147,0,0,0.063186579628488,0,0,0,0,0,1.19472429772959,0.853828638089378,0,0.347119476670262,1.37189356380129,0,0.52418000472609,0,0,0,0,0.969890164884194,0.353024506766001,0.225980740780532,0,0,0,1.95551382734803,0,0.640358984218058,0,1.87317542300338,0,0,0,0,3.29971648463514,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0.670869375198532,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86741031243341,1.06787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,2.81000943484129,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13352962756136,0,0,0,0,0,0,0.192914038270915,3.04096393175531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,2.95712172434091,0,0,0,0,0,1.09651553371436,0,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0.827356886187777,0,0.863424021355654,0,1.68163297988273,0,0,0,0.500335809236594,0,4.18469131325251,0,0,0,0,0,2.15113679410139,0,0,5.92741870267301,2.97838929107265,0,0,0.335566295393377,1.3741032706134,1.82876887473404,0,0,0,0,1.16969731731053,0,0,0.33883824611688,0,0,0.385870790539723,0,3.29222107453066,0.245148321753905,1.17838273550813,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,1.46067277649303,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.827054095813604,0.250707539292375,0,0,0,0,1.27940389140589,0,0,0,0,1.33659032384146,0.202117188958219,0.653150243690884,0.342233301085281,2.22261774948139,1.86477734020959,0.99798106963804,0.325613074443898,0.106727345877715,0,5.29968692428863,0,0.244482888365733,0,0,0,0 | |||
|short_description=p10@SCNN1A | |||
}} |
Revision as of 11:39, 11 January 2014
Short description: | p10@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SCNN1A_5end |
Coexpression cluster: | C3316_Amniotic_seminal_ductal_ductus_lung_tubular_Placental |
Association with transcript: | 117bp_to_ENST00000542436_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.53e-11 | 4 |
amniotic epithelial cell | 5.54e-11 | 2 |
Merkel cell | 4.86e-10 | 2 |
epithelial cell | 5.01e-08 | 253 |
placental epithelial cell | 4.26e-07 | 3 |
epithelial cell of stomach | 5.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.01e-07 | 10 |
male genital duct | 1.18e-07 | 3 |
internal male genitalia | 1.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreatic cancer | 1.53e-11 | 4 |
tubular adenocarcinoma | 8.97e-11 | 2 |
pancreas adenocarcinoma | 1.31e-10 | 2 |
pancreatic carcinoma | 1.31e-10 | 2 |
pancreatic ductal adenocarcinoma | 1.31e-10 | 2 |
signet ring cell adenocarcinoma | 4.86e-10 | 2 |
carcinoma | 5.15e-10 | 106 |
cell type cancer | 2.01e-09 | 143 |
adenocarcinoma | 2.19e-08 | 25 |
gastrointestinal system cancer | 4.20e-08 | 14 |
endocrine gland cancer | 7.85e-08 | 6 |