FFCP PHASE1:Hg19::chr12:6646472..6646496,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2597 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4141 | |||
|TSSclassifier=strong | |||
|UniProt=Q5ZEY3 | |||
|association_with_transcript=19bp_to_uc001qox.1_5end | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_18_at_GAPDH_5end | |||
|id=chr12:6646472..6646496,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.70e-27!42;CL:0000860!2.23e-24!45;CL:0000557!5.18e-21!71;CL:0000766!2.38e-20!76;CL:0000839!4.53e-20!70;CL:0002009!8.54e-18!65;CL:0002194!2.65e-17!63;CL:0000576!2.65e-17!63;CL:0000040!2.65e-17!63;CL:0000559!2.65e-17!63;CL:0000763!1.52e-15!112;CL:0000049!1.52e-15!112;CL:0000738!1.24e-10!140;CL:0002031!2.45e-10!124;CL:0002032!4.18e-09!165;CL:0000837!4.18e-09!165;CL:0000037!2.82e-08!172;CL:0000566!2.82e-08!172;CL:0000197!5.20e-08!6;CL:0000098!5.20e-08!6;CL:0002167!5.20e-08!6;CL:0002087!1.72e-07!119;CL:0000988!3.19e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.84e-12;6!CL:0000098;1.84e-12;6!CL:0002167;1.84e-12;6!CL:0000540;6.04e-08;6!CL:0000404;6.04e-08;6!CL:0000710;8.04e-08;20!CL:0002541;8.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.25e-12,6;CL:0000098,1.25e-12,6;CL:0002167,1.25e-12,6;CL:0000540,6.07e-08,6;CL:0000031,6.07e-08,6;CL:0000404,6.07e-08,6;CL:0000710,7.12e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.17e-08;29!CL:0000031;6.04e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.50e-19!80;UBERON:0001474!1.09e-16!86;UBERON:0001737!3.34e-16!9;UBERON:0004765!1.86e-14!101;UBERON:0001434!1.86e-14!101;UBERON:0002390!2.98e-13!102;UBERON:0003061!2.98e-13!102;UBERON:0002193!5.23e-12!112;UBERON:0002405!2.01e-11!115;UBERON:0002204!1.21e-10!167;UBERON:0001557!2.88e-09!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.09e-30;9!UBERON:0001557;1.09e-30;9!UBERON:0000072;1.61e-07;37!UBERON:0005631;3.44e-07;10!UBERON:0000158;3.44e-07;10!UBERON:0003124;8.79e-07;3!UBERON:0000920;8.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.94e-31,9;UBERON:0001557,4.46e-14,19;UBERON:0008947,4.50e-08,38;UBERON:0003258,4.50e-08,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581592955118259,1.13362783106643,0,0.929716147622738,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,0,0.344745680736619,0,0,1.31769637679823,3.27487380069415,2.9214052977861,1.22433556948361,0.320929027076094,0,0.659702600373432,0.997318288108159,0.426224750532694,0.290209238628584,0.56738522469114,0,0.251248665256743,1.0429658368404,0.434377689410233,0.605399502633369,0,0.949387162322653,0.211255286311942,0.850417199860174,0.209658645508376,0.44931452458598,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0,0,0,0.384273959177026,0.390178042679635,0.822189523018381,0.552700035571697,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,0.80823028409406,0,0,0,0,0,0,0,0,0,0,7.56962552626885,1.09493207722749,0,0,0,0,0,2.01121560067735,1.68584690078102,1.20505514941741,1.10293972732394,1.52515610864684,0.71181185733329,3.23595139584395,1.76599318612811,1.53898862778556,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,1.23267807618516,1.4512968087854,0.576479813667846,0.75745460055828,0.253991577168676,0,0,0,0,0.300343057843917,2.00078502841405,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74347550755453,2.67643483195743,1.41932173530541,1.52283839490527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,1.86434757865267,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0,0,1.19372242368845,1.48482340416319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,1.27600463892768,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14410075088061,13.8914830963206,11.6323294648172,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.488105059607853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,4.49803112163605,0,0.414706207840855,0,2.08698024724694,0,0.380805212168795,0,0,0,1.39210127963548,1.59238355479446,0,1.03018711554838,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0.098150233615243,0,1.29485767437579,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@GAPDH | |||
}} |
Revision as of 11:41, 11 January 2014
Short description: | p18@GAPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GAPDH_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 19bp_to_uc001qox.1_5end |
EntrezGene: | GAPDH |
HGNC: | 4141 |
UniProt: | Q5ZEY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.25e-12 | 6 |
sensory epithelial cell | 1.25e-12 | 6 |
olfactory epithelial cell | 1.25e-12 | 6 |
neuron | 6.07e-08 | 6 |
neuroblast | 6.07e-08 | 6 |
electrically signaling cell | 6.07e-08 | 6 |
neurecto-epithelial cell | 7.12e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.94e-31 | 9 |
upper respiratory tract | 4.46e-14 | 19 |
respiratory primordium | 4.50e-08 | 38 |
endoderm of foregut | 4.50e-08 | 38 |