FFCP PHASE1:Hg19::chr12:72148996..72149025,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18263 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=86bp_to_AB385582,AM393692_5end | |||
|description=CAGE_peak_2_at_RAB21_5end | |||
|id=chr12:72148996..72149025,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.03e-16!42;CL:0000860!3.23e-15!45;CL:0002009!1.59e-10!65;CL:0000839!1.71e-10!70;CL:0002194!4.98e-10!63;CL:0000576!4.98e-10!63;CL:0000040!4.98e-10!63;CL:0000559!4.98e-10!63;CL:0000557!9.87e-10!71;CL:0000766!1.15e-08!76;CL:0000763!2.59e-08!112;CL:0000049!2.59e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-20;33!CL:0002057;1.99e-20;33!CL:0000473;6.60e-14;39!CL:0000234;6.60e-14;39!CL:0000576;3.04e-11;48!CL:0000766;4.34e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-22,42;CL:0002057,1.48e-22,42;CL:0000473,1.38e-19,48;CL:0000234,1.38e-19,48;CL:0000839,9.85e-15,66;CL:0002009,3.22e-14,61;CL:0002194,6.58e-14,59;CL:0000576,6.58e-14,59;CL:0000040,6.58e-14,59;CL:0000559,6.58e-14,59;CL:0000763,6.88e-14,108;CL:0000049,6.88e-14,108;CL:0000557,1.42e-13,67;CL:0000766,7.39e-13,72;CL:0000988,3.66e-12,177;CL:0002032,8.42e-12,161;CL:0000837,8.42e-12,161;CL:0000037,1.24e-11,168;CL:0002031,9.75e-11,120;CL:0000738,2.98e-10,136;CL:0002087,5.45e-10,115;CL:0002320,2.48e-07,361;CL:0000134,6.30e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.26e-09!80;UBERON:0002390!1.74e-08!102;UBERON:0003061!1.74e-08!102;UBERON:0004765!1.37e-07!101;UBERON:0001434!1.37e-07!101;UBERON:0001474!1.43e-07!86;UBERON:0002193!7.53e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,3.64e-13,90;UBERON:0002371,1.02e-12,76;UBERON:0001474,1.37e-11,82;UBERON:0002390,2.68e-11,98;UBERON:0003061,2.68e-11,98;UBERON:0001434,4.38e-11,100;UBERON:0002193,1.57e-09,108;UBERON:0002405,2.43e-09,93;UBERON:0003081,2.80e-07,203;UBERON:0002204,7.94e-07,167 | |||
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| |||
|short_description=p2@RAB21 | |||
}} |
Revision as of 14:41, 11 January 2014
Short description: | p2@RAB21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB21_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_AB385582, AM393692_5end |
EntrezGene: | RAB21 |
HGNC: | 18263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.48e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.48e-22 | 42 |
defensive cell | 1.38e-19 | 48 |
phagocyte | 1.38e-19 | 48 |
myeloid lineage restricted progenitor cell | 9.85e-15 | 66 |
macrophage dendritic cell progenitor | 3.22e-14 | 61 |
monopoietic cell | 6.58e-14 | 59 |
monocyte | 6.58e-14 | 59 |
monoblast | 6.58e-14 | 59 |
promonocyte | 6.58e-14 | 59 |
myeloid cell | 6.88e-14 | 108 |
common myeloid progenitor | 6.88e-14 | 108 |
granulocyte monocyte progenitor cell | 1.42e-13 | 67 |
myeloid leukocyte | 7.39e-13 | 72 |
hematopoietic cell | 3.66e-12 | 177 |
hematopoietic oligopotent progenitor cell | 8.42e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.42e-12 | 161 |
hematopoietic stem cell | 1.24e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 9.75e-11 | 120 |
leukocyte | 2.98e-10 | 136 |
nongranular leukocyte | 5.45e-10 | 115 |
connective tissue cell | 2.48e-07 | 361 |
mesenchymal cell | 6.30e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 3.64e-13 | 90 |
bone marrow | 1.02e-12 | 76 |
bone element | 1.37e-11 | 82 |
hematopoietic system | 2.68e-11 | 98 |
blood island | 2.68e-11 | 98 |
skeletal system | 4.38e-11 | 100 |
hemolymphoid system | 1.57e-09 | 108 |
immune system | 2.43e-09 | 93 |
lateral plate mesoderm | 2.80e-07 | 203 |
musculoskeletal system | 7.94e-07 | 167 |