FFCP PHASE1:Hg19::chr12:118810688..118810744,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18133 | |||
|TSSclassifier=strong | |||
|UniProt=F5GX96 | |||
|association_with_transcript=0bp_to_ENST00000542532,ENST00000542692_5end | |||
|coexpression_cluster_id=C509 | |||
|description=CAGE_peak_1_at_TAOK3_5end | |||
|id=chr12:118810688..118810744,- | |||
|ontology_enrichment_celltype=CL:0000763!8.77e-31!112;CL:0000049!8.77e-31!112;CL:0000766!2.03e-29!76;CL:0000037!1.20e-26!172;CL:0000566!1.20e-26!172;CL:0000557!1.41e-25!71;CL:0000839!2.12e-25!70;CL:0002032!1.23e-24!165;CL:0000837!1.23e-24!165;CL:0000738!1.55e-24!140;CL:0002057!6.55e-24!42;CL:0002009!1.53e-22!65;CL:0002194!4.65e-22!63;CL:0000576!4.65e-22!63;CL:0000040!4.65e-22!63;CL:0000559!4.65e-22!63;CL:0000988!9.45e-21!182;CL:0000860!1.82e-20!45;CL:0002031!6.70e-19!124;CL:0002087!2.31e-16!119;CL:0000134!2.15e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.70e-17;33!CL:0002057;3.70e-17;33!CL:0000576;2.14e-15;48!CL:0000473;1.77e-14;39!CL:0000234;1.77e-14;39!CL:0000766;4.72e-14;69!CL:0000763;9.41e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.66e-33,108;CL:0000049,5.66e-33,108;CL:0000766,2.68e-32,72;CL:0000557,2.63e-28,67;CL:0000839,3.81e-28,66;CL:0000037,4.41e-28,168;CL:0000738,4.17e-26,136;CL:0002032,4.92e-26,161;CL:0000837,4.92e-26,161;CL:0002009,3.40e-25,61;CL:0002194,9.78e-25,59;CL:0000576,9.78e-25,59;CL:0000040,9.78e-25,59;CL:0000559,9.78e-25,59;CL:0000860,6.55e-24,42;CL:0002057,6.55e-24,42;CL:0000473,1.38e-23,48;CL:0000234,1.38e-23,48;CL:0000988,2.56e-22,177;CL:0002031,2.54e-20,120;CL:0002087,1.11e-17,115;CL:0000134,4.44e-08,354;CL:0002320,4.92e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.70e-17;42!CL:0000049;4.93e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.37e-27!102;UBERON:0003061!3.37e-27!102;UBERON:0007023!3.20e-24!115;UBERON:0002193!6.86e-24!112;UBERON:0002371!5.23e-23!80;UBERON:0001474!4.57e-19!86;UBERON:0004765!4.95e-18!101;UBERON:0001434!4.95e-18!101;UBERON:0002405!1.42e-15!115;UBERON:0001049!1.50e-07!57;UBERON:0005068!1.50e-07!57;UBERON:0006241!1.50e-07!57;UBERON:0007135!1.50e-07!57;UBERON:0003080!7.67e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.56e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.40e-29,98;UBERON:0003061,2.40e-29,98;UBERON:0002193,1.05e-25,108;UBERON:0002371,2.71e-25,76;UBERON:0007023,8.33e-24,114;UBERON:0002405,9.55e-22,93;UBERON:0001474,6.11e-21,82;UBERON:0001434,2.65e-18,100;UBERON:0004765,3.56e-18,90;UBERON:0001049,2.37e-07,56;UBERON:0005068,2.37e-07,56;UBERON:0006241,2.37e-07,56;UBERON:0007135,2.37e-07,56;UBERON:0002384,8.41e-07,371 | |||
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| |||
|short_description=p1@TAOK3 | |||
}} |
Revision as of 16:11, 11 January 2014
Short description: | p1@TAOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAOK3_5end |
Coexpression cluster: | C509_Neutrophils_Eosinophils_CD14_Whole_CD34_CD19_Peripheral |
Association with transcript: | 0bp_to_ENST00000542532, ENST00000542692_5end |
EntrezGene: | TAOK3 |
HGNC: | 18133 |
UniProt: | F5GX96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.66e-33 | 108 |
common myeloid progenitor | 5.66e-33 | 108 |
myeloid leukocyte | 2.68e-32 | 72 |
granulocyte monocyte progenitor cell | 2.63e-28 | 67 |
myeloid lineage restricted progenitor cell | 3.81e-28 | 66 |
hematopoietic stem cell | 4.41e-28 | 168 |
leukocyte | 4.17e-26 | 136 |
hematopoietic oligopotent progenitor cell | 4.92e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.92e-26 | 161 |
macrophage dendritic cell progenitor | 3.40e-25 | 61 |
monopoietic cell | 9.78e-25 | 59 |
monocyte | 9.78e-25 | 59 |
monoblast | 9.78e-25 | 59 |
promonocyte | 9.78e-25 | 59 |
classical monocyte | 6.55e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.55e-24 | 42 |
defensive cell | 1.38e-23 | 48 |
phagocyte | 1.38e-23 | 48 |
hematopoietic cell | 2.56e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 2.54e-20 | 120 |
nongranular leukocyte | 1.11e-17 | 115 |
mesenchymal cell | 4.44e-08 | 354 |
connective tissue cell | 4.92e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.40e-29 | 98 |
blood island | 2.40e-29 | 98 |
hemolymphoid system | 1.05e-25 | 108 |
bone marrow | 2.71e-25 | 76 |
adult organism | 8.33e-24 | 114 |
immune system | 9.55e-22 | 93 |
bone element | 6.11e-21 | 82 |
skeletal system | 2.65e-18 | 100 |
skeletal element | 3.56e-18 | 90 |
neural tube | 2.37e-07 | 56 |
neural rod | 2.37e-07 | 56 |
future spinal cord | 2.37e-07 | 56 |
neural keel | 2.37e-07 | 56 |
connective tissue | 8.41e-07 | 371 |