FFCP PHASE1:Hg19::chr13:51484154..51484216,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25671 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=227bp_to_ENST00000494721_5end | |||
|coexpression_cluster_id=C3382 | |||
|description=CAGE_peak_2_at_RNASEH2B_5end | |||
|id=chr13:51484154..51484216,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.58e-24!53;CL:0000051!7.58e-24!53;CL:0000838!2.23e-23!52;CL:0000037!5.00e-23!172;CL:0000566!5.00e-23!172;CL:0002032!1.51e-20!165;CL:0000837!1.51e-20!165;CL:0000988!5.78e-20!182;CL:0002087!1.93e-14!119;CL:0000945!3.48e-13!24;CL:0000826!3.48e-13!24;CL:0002031!4.63e-13!124;CL:0000738!1.46e-12!140;CL:0000084!5.31e-11!25;CL:0000827!5.31e-11!25;CL:0000236!2.57e-08!14;CL:0000791!5.33e-08!18;CL:0000789!5.33e-08!18;CL:0002420!5.33e-08!18;CL:0002419!5.33e-08!18;CL:0000790!5.33e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.17e-14;53!CL:0000945;2.57e-13;24!CL:0000084;5.45e-11;25!CL:0000236;3.11e-08;13!CL:0000791;5.68e-08;18!CL:0000789;5.68e-08;18!CL:0002419;5.68e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.35e-24,53;CL:0000051,7.35e-24,53;CL:0000838,2.16e-23,52;CL:0000037,1.29e-22,168;CL:0002032,3.79e-20,161;CL:0000837,3.79e-20,161;CL:0000988,4.40e-20,177;CL:0002087,6.21e-14,115;CL:0000945,3.42e-13,24;CL:0000826,3.42e-13,24;CL:0002031,1.46e-12,120;CL:0000738,3.59e-12,136;CL:0000084,5.25e-11,25;CL:0000827,5.25e-11,25;CL:0000236,2.54e-08,14;CL:0000791,5.28e-08,18;CL:0000789,5.28e-08,18;CL:0002420,5.28e-08,18;CL:0002419,5.28e-08,18;CL:0000790,5.28e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;2.17e-14;53!CL:0000790;5.68e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!8.92e-22!51;DOID:0060083!8.92e-22!51;DOID:1240!2.96e-16!39;DOID:162!1.74e-13!235;DOID:14566!1.77e-13!239;DOID:8692!1.72e-12!31;DOID:0050686!2.29e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.74e-13;39!DOID:2531;4.93e-13;51!DOID:0060083;4.93e-13;51!DOID:8692;3.04e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.60e-22,51;DOID:0060083,7.60e-22,51;DOID:1240,2.55e-16,39;DOID:162,2.02e-13,235;DOID:14566,2.05e-13,239;DOID:8692,1.49e-12,31;DOID:0050686,2.78e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@RNASEH2B | |||
}} |
Revision as of 17:51, 11 January 2014
Short description: | p2@RNASEH2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNASEH2B_5end |
Coexpression cluster: | C3382_Hodgkin_acute_chronic_CD19_CD133_thymus_granulocyte |
Association with transcript: | 227bp_to_ENST00000494721_5end |
EntrezGene: | RNASEH2B |
HGNC: | 25671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.35e-24 | 53 |
common lymphoid progenitor | 7.35e-24 | 53 |
lymphoid lineage restricted progenitor cell | 2.16e-23 | 52 |
hematopoietic stem cell | 1.29e-22 | 168 |
hematopoietic oligopotent progenitor cell | 3.79e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.79e-20 | 161 |
hematopoietic cell | 4.40e-20 | 177 |
nongranular leukocyte | 6.21e-14 | 115 |
lymphocyte of B lineage | 3.42e-13 | 24 |
pro-B cell | 3.42e-13 | 24 |
hematopoietic lineage restricted progenitor cell | 1.46e-12 | 120 |
leukocyte | 3.59e-12 | 136 |
T cell | 5.25e-11 | 25 |
pro-T cell | 5.25e-11 | 25 |
B cell | 2.54e-08 | 14 |
mature alpha-beta T cell | 5.28e-08 | 18 |
alpha-beta T cell | 5.28e-08 | 18 |
immature T cell | 5.28e-08 | 18 |
mature T cell | 5.28e-08 | 18 |
immature alpha-beta T cell | 5.28e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.60e-22 | 51 |
immune system cancer | 7.60e-22 | 51 |
leukemia | 2.55e-16 | 39 |
cancer | 2.02e-13 | 235 |
disease of cellular proliferation | 2.05e-13 | 239 |
myeloid leukemia | 1.49e-12 | 31 |
organ system cancer | 2.78e-08 | 137 |