FFCP PHASE1:Hg19::chr14:93118543..93118570,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18751 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-275bp_to_ENST00000556418_5end | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_4_at_RIN3_5end | |||
|id=chr14:93118543..93118570,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.27e-67!172;CL:0000566!2.27e-67!172;CL:0002032!1.98e-63!165;CL:0000837!1.98e-63!165;CL:0000738!2.00e-61!140;CL:0000988!2.47e-60!182;CL:0000763!1.33e-49!112;CL:0000049!1.33e-49!112;CL:0002031!5.56e-49!124;CL:0002087!1.37e-47!119;CL:0000766!1.67e-45!76;CL:0000839!1.59e-38!70;CL:0000557!2.88e-38!71;CL:0002194!4.74e-34!63;CL:0000576!4.74e-34!63;CL:0000040!4.74e-34!63;CL:0000559!4.74e-34!63;CL:0002009!3.84e-33!65;CL:0002057!8.88e-33!42;CL:0000860!3.48e-29!45;CL:0000542!4.01e-12!53;CL:0000051!4.01e-12!53;CL:0000838!5.62e-12!52;CL:0000134!5.23e-11!358;CL:0002320!5.43e-10!365;CL:0002393!1.26e-08!9;CL:0002397!1.26e-08!9;CL:0000791!1.81e-08!18;CL:0000789!1.81e-08!18;CL:0002420!1.81e-08!18;CL:0002419!1.81e-08!18;CL:0000790!1.81e-08!18;CL:0000094!1.98e-08!8;CL:0000219!6.35e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-29;33!CL:0002057;3.68e-29;33!CL:0000473;7.97e-29;39!CL:0000234;7.97e-29;39!CL:0000576;6.89e-28;48!CL:0000766;1.30e-26;69!CL:0000763;7.06e-19;100!CL:0002087;1.11e-16;104!CL:0000738;4.30e-16;136!CL:0000988;5.14e-12;177!CL:0000094;2.66e-10;8!CL:0000791;1.63e-09;18!CL:0000789;1.63e-09;18!CL:0002419;1.63e-09;18!CL:0000542;4.60e-08;53!CL:0002393;1.39e-07;6!CL:0002397;1.39e-07;6!CL:0000084;1.67e-07;25!CL:0000236;3.95e-07;13!CL:0000625;4.79e-07;11!CL:0000097;6.63e-07;5!CL:0000081;8.37e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.90e-76,168;CL:0002032,3.71e-74,161;CL:0000837,3.71e-74,161;CL:0000738,3.70e-73,136;CL:0000988,7.13e-70,177;CL:0000766,4.99e-61,72;CL:0002087,1.37e-59,115;CL:0000763,1.49e-59,108;CL:0000049,1.49e-59,108;CL:0002031,1.70e-59,120;CL:0000557,1.49e-50,67;CL:0000839,2.09e-49,66;CL:0000473,1.68e-46,48;CL:0000234,1.68e-46,48;CL:0002194,4.15e-46,59;CL:0000576,4.15e-46,59;CL:0000040,4.15e-46,59;CL:0000559,4.15e-46,59;CL:0002009,6.93e-44,61;CL:0000860,2.03e-41,42;CL:0002057,2.03e-41,42;CL:0000134,1.17e-15,354;CL:0002320,1.21e-14,361;CL:0000838,1.45e-13,52;CL:0000542,4.20e-13,53;CL:0000051,4.20e-13,53;CL:0000219,1.57e-11,386;CL:0002393,1.43e-10,9;CL:0002397,1.43e-10,9;CL:0000094,2.55e-10,8;CL:0000791,1.49e-09,18;CL:0000789,1.49e-09,18;CL:0002420,1.49e-09,18;CL:0002419,1.49e-09,18;CL:0000790,1.49e-09,18;CL:0000084,1.68e-07,25;CL:0000827,1.68e-07,25;CL:0000048,2.96e-07,427;CL:0000034,3.77e-07,441;CL:0000625,4.61e-07,11;CL:0000097,6.47e-07,5;CL:0002028,6.47e-07,5;CL:0000081,8.11e-07,11;CL:0000723,9.50e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-29;42!CL:0000049;3.76e-17;108!CL:0000790;1.63e-09;18!CL:0000051;4.60e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-41!102;UBERON:0003061!1.84e-41!102;UBERON:0002193!1.25e-37!112;UBERON:0002371!5.77e-33!80;UBERON:0001474!1.20e-29!86;UBERON:0007023!2.64e-26!115;UBERON:0002405!5.16e-24!115;UBERON:0004765!4.45e-23!101;UBERON:0001434!4.45e-23!101;UBERON:0003081!2.13e-09!216;UBERON:0002384!5.24e-09!375;UBERON:0000178!1.25e-07!15;UBERON:0000179!1.25e-07!15;UBERON:0000463!1.25e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.79e-10;15!UBERON:0000179;7.79e-10;15!UBERON:0000463;7.79e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.22e-52,98;UBERON:0003061,1.22e-52,98;UBERON:0002193,8.08e-48,108;UBERON:0002371,3.05e-43,76;UBERON:0001474,1.61e-39,82;UBERON:0002405,1.80e-38,93;UBERON:0004765,7.18e-34,90;UBERON:0001434,3.87e-28,100;UBERON:0003081,1.51e-14,203;UBERON:0002384,9.70e-14,371;UBERON:0000178,7.98e-10,15;UBERON:0000179,7.98e-10,15;UBERON:0000463,7.98e-10,15;UBERON:0002204,3.76e-09,167;UBERON:0007023,1.80e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50176521385249,6.65014774544561,6.13944094246698,31.0757778710634,5.75744097145819,17.1845896880844,0,0,0,0,0,3.81680571135301,16.0658668474244,19.4528114046037,24.0882066494596,7.61312612415743,8.42123531649347,8.49999373192816,28.7888512783538,32.4973311572376,38.328281667675,17.8970358417377,10.6903650885675,10.5300166104335,14.3846196161075,13.5765174460423,6.3850202069918,10.6871161028352,7.74581620300591,14.8969135253776,27.8598662523055,13.6453075028923,12.3597916444797,14.6920268338033,13.1580901101198,21.7374622771674,24.0791449136303,20.5447567350281,20.0325632750366,3.77272010217159,5.10646702222026,6.22822248995575,9.04495194924276,9.38669253156363,7.8187984093842,1.81619850790011,2.94622108790052,2.84816148696796,10.1402537429732,9.779797798392,12.7891773760109,19.9944963440761,17.1201657839317,27.0018985651095,15.1056754182862,11.3382506003481,15.1611247624646,5.27988733383968,5.46138611262132,6.22656477704488,1.28019066769952,4.40435585739614,5.74752439954483,4.62731410949403,4.77026877267682,7.96898156753228,4.11066032559657,8.02773779062981,13.2171328579026,8.40762844472304,3.68737718685108,2.360517241366,2.35806457649499,3.70082698199117,10.1983762188314,4.23698946623668,4.73447805734733,5.84480185223734,4.45641827540694,6.48132996444642,6.42448294292501,7.58250818542044,9.73494029915131,8.9740949816316,4.76869923350661,6.35605040907451,4.63684937176084,2.66915813691709,2.94294910898684,5.22677619024884,3.62589896632212,1.91610246800961,1.71813722741315,2.02415753615602,4.14135038621326,2.60433381542567,1.90090408889675,5.72185452495537,4.09557155694139,4.99722906209383,3.07810427657222,1.64225599384209,1.20964045934839,1.06976078313403,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.11332214173056,0,0,0.649094787309367,2.78607579678828,1.99436940778298,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8519294051796,38.7780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0.441463099414651,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,5.41677413392274,5.85010662848094,8.32334508816878,0,0,0,0,0,0,32.5157737011323,9.59727930744164,21.7694521317811,47.9919444878482,14.6441222774601,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,12.162378064119,14.5654556515317,4.21667878966063,0,0,0,0,0,0,0.112085143993527,4.53170748464433,5.17506179662842,6.54549485026717,0,0,0,0,0,40.4463792931478,50.8574480646842,67.5497286900738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4737618286021,18.9828496720383,12.0602140317892,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,2.36994326789761,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.07116361708914,0,0,0,0,13.7010854492686,12.9988325214204,18.7983571767474,10.4821981201427,10.2840568271549,15.5633594686252,9.18053443304795,10.3106272918255,0,0,0,0.371606350251437,0,0,0,0,6.70268795463284,6.56188106444037,2.921597462471,7.30072663094993,0,0.626719583092093,5.01268954180134,2.70866844482565,0.321176150207399,2.42159648629257,8.94277099149685,9.96165499791718,0.614481528616916,1.56573275524691,1.16794399198336,5.86164286206121,0,0,4.59774653409171,0,2.81974010175699,0,2.93016358543788,0,4.1234052182667,0,0,0.593929361665277,0,0,0.984685914873589,0,0,0,0.597743964753209,2.48655523978033,0,0,0.615424027305347,0,0,0,12.7893092556718,2.46608514092334,19.1586473877552,0,0,0.834912883456661,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.361789315876224,1.52581736317083,0.221158519862449,0,0,0,0,0.769502585037971,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,3.32423363800313,0,0,0,0,3.17873157960757,0,0,0,0,1.99052386215701,0.796118080530053,3.66618086960175,0,0,0,0.471807930864739,0.802577647298789,0,0,0,0,0,1.20990716048664,0,3.28570214068137,0,0,0.664653872707185,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0.189932387867636,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.36905378891993,21.7169199713853,0,2.36598618851383,2.23425921017803,0.229160424011684,3.58936512288407,0.599037001496973,1.28767814440971,1.56220020209311,0.739018197353989,0,0,0,0,0.0674035438541849,0,0,3.18091875923721,1.49823746722733,0,0,0,0.2249738915515,0,0.121499113316049,0,0.709251365692784,0.472091293214983,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.985110248992068,0,0,1.75862680413699,0,1.93924434542326,1.3223260174269,0,0,5.55294545352012,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| |||
|short_description=p4@RIN3 | |||
}} |
Revision as of 21:35, 11 January 2014
Short description: | p4@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RIN3_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | -275bp_to_ENST00000556418_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.22e-52 | 98 |
blood island | 1.22e-52 | 98 |
hemolymphoid system | 8.08e-48 | 108 |
bone marrow | 3.05e-43 | 76 |
bone element | 1.61e-39 | 82 |
immune system | 1.80e-38 | 93 |
skeletal element | 7.18e-34 | 90 |
skeletal system | 3.87e-28 | 100 |
lateral plate mesoderm | 1.51e-14 | 203 |
connective tissue | 9.70e-14 | 371 |
blood | 7.98e-10 | 15 |
haemolymphatic fluid | 7.98e-10 | 15 |
organism substance | 7.98e-10 | 15 |
musculoskeletal system | 3.76e-09 | 167 |
adult organism | 1.80e-07 | 114 |