FFCP PHASE1:Hg19::chr16:88825943..88825988,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:88825943..88825988,+ | |||
|id=chr16:88825943..88825988,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.42e-08!5;CL:0000624!3.76e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.36e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.36e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.98e-16;1!UBERON:0001045;2.56e-15;1!UBERON:0004161;3.65e-12;11!UBERON:0009497;2.20e-10;13!UBERON:0007297;1.61e-08;2!UBERON:0003104;1.55e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.87e-12!115;UBERON:0006947!1.58e-09!3;UBERON:0004054!1.58e-09!3;UBERON:0003135!3.43e-08!11;UBERON:0005904!3.25e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.02e-20;3!UBERON:0004054;4.02e-20;3!UBERON:0000996;5.56e-16;1!UBERON:0001000;9.98e-16;1!UBERON:0000998;9.98e-16;1!UBERON:0006868;9.98e-16;1!UBERON:0005352;9.98e-16;1!UBERON:0005904;2.38e-15;4!UBERON:0001154;2.56e-15;1!UBERON:0001153;2.56e-15;1!UBERON:0009854;2.56e-15;1!UBERON:0004175;3.23e-11;21!UBERON:0001255;2.57e-08;2!UBERON:0001556;2.57e-08;2!UBERON:0002107;2.83e-07;19!UBERON:0006925;2.83e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.48e-20,3;UBERON:0004054,2.48e-20,3;UBERON:0000996,5.56e-16,1;UBERON:0001000,6.44e-16,1;UBERON:0005352,6.44e-16,1;UBERON:0000998,7.46e-16,1;UBERON:0006868,7.46e-16,1;UBERON:0005904,1.66e-15,4;UBERON:0001154,1.78e-15,1;UBERON:0001153,1.78e-15,1;UBERON:0001045,1.78e-15,1;UBERON:0001046,3.11e-12,19;UBERON:0009854,4.11e-10,23;UBERON:0000162,9.81e-10,14;UBERON:0001353,9.81e-10,14;UBERON:0000163,9.81e-10,14;UBERON:0006866,9.81e-10,14;UBERON:0000164,9.81e-10,14;UBERON:0000931,9.81e-10,14;UBERON:0004175,1.73e-09,25;UBERON:0004122,4.01e-09,15;UBERON:0009856,5.64e-09,26;UBERON:0003064,1.95e-08,28;UBERON:0001255,2.87e-08,2;UBERON:0001556,2.87e-08,2;UBERON:0002107,2.83e-07,19;UBERON:0006925,2.83e-07,19;UBERON:0008836,2.83e-07,19;UBERON:0007023,2.88e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,2.1349799145941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.365921118388786,0,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.435753854075961,0,1.15425387755696,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0,0,0,0,0,0,0,0,0,0,2.76209081994573,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.872901148395775,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,1.57566364614447,2.47247575143499,1.61768505250044,0.393709926058995,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,1.72684804271131,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.231522474323834,0.218559560503957,0,2.45148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.977931553462932,0,6.65756774185513,0,0 | |||
|short_description=p@chr16:88825943..88825988,+ | |||
}} |
Revision as of 12:46, 20 January 2014
Short description: | p@chr16:88825943..88825988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:88825943..88825988, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.36e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.48e-20 | 3 |
internal male genitalia | 2.48e-20 | 3 |
vagina | 5.56e-16 | 1 |
vas deferens | 6.44e-16 | 1 |
spermatic cord | 6.44e-16 | 1 |
seminal vesicle | 7.46e-16 | 1 |
seminal fluid secreting gland | 7.46e-16 | 1 |
duct of male reproductive system | 1.66e-15 | 4 |
vermiform appendix | 1.78e-15 | 1 |
caecum | 1.78e-15 | 1 |
midgut | 1.78e-15 | 1 |
hindgut | 3.11e-12 | 19 |
digestive tract diverticulum | 4.11e-10 | 23 |
cloaca | 9.81e-10 | 14 |
anal region | 9.81e-10 | 14 |
embryonic cloaca | 9.81e-10 | 14 |
terminal part of digestive tract | 9.81e-10 | 14 |
primitive urogenital sinus | 9.81e-10 | 14 |
proctodeum | 9.81e-10 | 14 |
internal genitalia | 1.73e-09 | 25 |
genitourinary system | 4.01e-09 | 15 |
sac | 5.64e-09 | 26 |
intermediate mesoderm | 1.95e-08 | 28 |
urinary bladder | 2.87e-08 | 2 |
lower urinary tract | 2.87e-08 | 2 |
liver | 2.83e-07 | 19 |
digestive gland | 2.83e-07 | 19 |
liver bud | 2.83e-07 | 19 |
adult organism | 2.88e-07 | 114 |