FFCP PHASE1:Hg19::chr2:15319202..15319209,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_at_chr2:15319202..15319209,- | |||
|id=chr2:15319202..15319209,- | |||
|ontology_enrichment_celltype=CL:0002127!3.16e-18!1;CL:0000914!3.16e-18!1;CL:0000911!3.16e-18!1;CL:0000814!3.16e-18!1;CL:0002042!3.16e-18!1;CL:0002039!3.16e-18!1;CL:0002040!3.16e-18!1;CL:0002041!3.16e-18!1;CL:0000453!2.95e-14!5;CL:0000893!8.69e-10!2;CL:0002489!8.69e-10!2;CL:0000809!8.69e-10!2;CL:0000808!8.69e-10!2;CL:0000894!8.69e-10!2;CL:0000806!8.69e-10!2;CL:0000807!8.69e-10!2;CL:0000805!8.69e-10!2;CL:0002425!8.69e-10!2;CL:0001014!1.33e-09!2;CL:0001016!1.33e-09!2;CL:0000990!2.46e-08!8;CL:0000451!5.64e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.55e-98;1!CL:0000911;2.55e-98;1!CL:0000814;2.55e-98;1!CL:0000084;4.64e-17;25!CL:0000542;1.91e-07;53!CL:0000791;7.60e-07;18!CL:0000789;7.60e-07;18!CL:0002419;7.60e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.55e-98,1;CL:0000914,2.55e-98,1;CL:0000911,2.55e-98,1;CL:0000814,2.55e-98,1;CL:0002042,2.55e-98,1;CL:0002039,2.55e-98,1;CL:0002040,2.55e-98,1;CL:0002041,2.55e-98,1;CL:0000893,4.52e-50,2;CL:0002489,4.52e-50,2;CL:0000809,4.52e-50,2;CL:0000808,4.52e-50,2;CL:0000894,4.52e-50,2;CL:0000806,4.52e-50,2;CL:0000807,4.52e-50,2;CL:0000805,4.52e-50,2;CL:0002425,4.52e-50,2;CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53;CL:0000791,7.60e-07,18;CL:0000789,7.60e-07,18;CL:0002420,7.60e-07,18;CL:0002419,7.60e-07,18;CL:0000790,7.60e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002425;4.52e-50;2!CL:0000051;1.91e-07;53!CL:0000790;7.60e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.73e-11;10!DOID:2531;1.54e-08;51!DOID:0060083;1.54e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.73e-11,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001042!1.29e-07!10;UBERON:0009145!1.29e-07!10;UBERON:0006562!5.31e-07!11;UBERON:0001723!8.62e-07!3;UBERON:0001033!8.62e-07!3;UBERON:0010056!8.62e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.14e-26,4;UBERON:0005058,7.14e-26,4;UBERON:0009113,7.14e-26,4;UBERON:0003295,7.14e-26,4;UBERON:0005562,7.14e-26,4;UBERON:0003351,9.07e-18,6;UBERON:0004177,1.91e-15,7;UBERON:0005057,1.91e-15,7;UBERON:0000974,3.02e-11,10;UBERON:0003408,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94411622680279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:15319202..15319209,- | |||
}} |
Revision as of 01:48, 21 January 2014
Short description: | p@chr2:15319202..15319209, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr2:15319202..15319209, - |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.55e-98 | 1 |
immature NK T cell | 2.55e-98 | 1 |
effector T cell | 2.55e-98 | 1 |
mature NK T cell | 2.55e-98 | 1 |
immature NK T cell stage IV | 2.55e-98 | 1 |
immature NK T cell stage I | 2.55e-98 | 1 |
immature NK T cell stage II | 2.55e-98 | 1 |
immature NK T cell stage III | 2.55e-98 | 1 |
thymocyte | 4.52e-50 | 2 |
double negative thymocyte | 4.52e-50 | 2 |
double-positive, alpha-beta thymocyte | 4.52e-50 | 2 |
DN4 thymocyte | 4.52e-50 | 2 |
DN1 thymic pro-T cell | 4.52e-50 | 2 |
DN2 thymocyte | 4.52e-50 | 2 |
DN3 thymocyte | 4.52e-50 | 2 |
immature single positive thymocyte | 4.52e-50 | 2 |
early T lineage precursor | 4.52e-50 | 2 |
T cell | 4.64e-17 | 25 |
pro-T cell | 4.64e-17 | 25 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
mature alpha-beta T cell | 7.60e-07 | 18 |
alpha-beta T cell | 7.60e-07 | 18 |
immature T cell | 7.60e-07 | 18 |
mature T cell | 7.60e-07 | 18 |
immature alpha-beta T cell | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.14e-26 | 4 |
hemolymphoid system gland | 7.14e-26 | 4 |
thymic region | 7.14e-26 | 4 |
pharyngeal gland | 7.14e-26 | 4 |
thymus primordium | 7.14e-26 | 4 |
pharyngeal epithelium | 9.07e-18 | 6 |
hemopoietic organ | 1.91e-15 | 7 |
immune organ | 1.91e-15 | 7 |
neck | 3.02e-11 | 10 |
gland of gut | 3.02e-11 | 10 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.73e-11 | 10 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |