FFCP PHASE1:Hg19::chr2:47606991..47607060,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1908 | |||
|description=CAGE_peak_at_chr2:47606991..47607060,+ | |||
|id=chr2:47606991..47607060,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.03e-12!254;CL:0000223!1.80e-09!59;CL:0000039!3.73e-09!7;CL:0000586!3.73e-09!7;CL:0002076!2.85e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.17e-13;7!CL:0000586;8.17e-13;7!CL:0002322;1.42e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.37e-13,7;CL:0000586,6.37e-13,7;CL:0000066,1.05e-11,253;CL:0002322,1.25e-11,5;CL:0000223,2.82e-09,58;CL:0002076,4.40e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.28e-09;10!UBERON:0005564;5.28e-09;10!UBERON:0006595;7.98e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.30e-31!106;DOID:0050687!3.53e-23!143;DOID:299!1.69e-12!25;DOID:162!1.83e-11!235;DOID:1749!5.09e-11!14;DOID:14566!9.09e-11!239 | |||
|ontology_enrichment_disease_v019=DOID:299;1.98e-14;25!DOID:305;2.39e-11;106!DOID:3119;2.46e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.85e-30,106;DOID:0050687,1.29e-23,143;DOID:299,1.49e-14,25;DOID:162,5.93e-12,235;DOID:14566,1.84e-11,239;DOID:3119,2.45e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.29e-12!155;UBERON:0001555!1.29e-12!155;UBERON:0007026!1.29e-12!155;UBERON:0004921!7.13e-12!129;UBERON:0004185!7.13e-12!129;UBERON:0004119!1.08e-11!169;UBERON:0000925!1.08e-11!169;UBERON:0006595!1.08e-11!169;UBERON:0000466!7.33e-10!126;UBERON:0005409!1.58e-09!35;UBERON:0000464!5.84e-09!104;UBERON:0007023!1.86e-08!115;UBERON:0000160!2.17e-08!27;UBERON:0000077!5.21e-08!130;UBERON:0003135!8.64e-08!11;UBERON:0003101!2.35e-07!22;UBERON:0000079!2.35e-07!22;UBERON:0000473!6.20e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.82e-19;22!UBERON:0004921;4.22e-17;33!UBERON:0000160;2.79e-15;17!UBERON:0000922;5.48e-09;49!UBERON:0002108;6.91e-09;4!UBERON:0003135;6.74e-08;11!UBERON:0000473;6.97e-08;8!UBERON:0000059;7.90e-08;11!UBERON:0003101;1.38e-07;22!UBERON:0000079;1.38e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.95e-16,25;UBERON:0000160,2.73e-15,17;UBERON:0004921,9.88e-13,118;UBERON:0001007,2.33e-12,145;UBERON:0001555,2.33e-12,145;UBERON:0007026,2.33e-12,145;UBERON:0004119,3.86e-11,160;UBERON:0000925,3.86e-11,160;UBERON:0006595,3.86e-11,160;UBERON:0002108,7.52e-09,4;UBERON:0000473,6.53e-08,8;UBERON:0003135,6.75e-08,11;UBERON:0000059,7.11e-08,11;UBERON:0003101,1.54e-07,22;UBERON:0000079,1.54e-07,22;UBERON:0005156,4.77e-07,59;UBERON:0000990,4.77e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.45782745153634,1.97529702878181,2.28054321033815,2.01856680700503,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44367627920718,0,0,0,0.502644862058154,0.277765335475589,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74664293734029,0,1.19705285616665,0,0,0,0.902399225814824,0.462092022626489,0,0,0.422206515571503,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0.895499018888713,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,1.47024129588619,0,0,0,0,0,0,0,1.29848776109822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.42132431836989,0,0,0,0,0,0,0.921482106297696,0,0.281338832821026,0,0,2.74463030566391,0.398495976502139,0.828851746593443,2.01546198283421,0,0,0,0.718946809178615,1.9692329214317,0,0,0,0,0,0,3.99227596002388,6.51069402713083,0.174919999992391,0,0.910347586283997,11.6956679134672,2.83665218121524,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0.278847488557207,0.0769502585037971,0,1.84451123510448,0.987334088507493,6.51884231532048,0,0.0915975934018623,0,0,0,0.332423363800313,0.451191321234361,0.19606253431774,0,0.948768663620925,0.317873157960757,0.632994193584081,3.91758739581955,2.12029607150911,0,7.96209544862804,2.65372693510018,25.6632660872123,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,1.17398771359254,0,3.15667522279512,14.5188859258397,0,0,0,0,0,0,0,0,1.99226682220855,0,12.8434206367997,0.587954384486266,0.261177619741208,0.873633341210151,0,0,0,0,0,0,0.225980740780532,0,0,0,7.03984977845291,0.400794101257669,1.06726497369676,0.599428828746391,4.46680293177729,0,2.23073497220554,0.864328787928898,0,2.59263438078475,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.599037001496973,0,0,0,0,5.82479747637269,0.945398187686684,0.824158583811665,1.41547442093788,0.196854963029498,0,0,0.544813624446302,1.60753148465019,0.825236619583403,2.9080823662043,0.449947783103001,0,0,0,0.709251365692784,0.314727528809989,0.211200673038813,0,0.959575986597226,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0.258565912723101,0.13223260174269,0,0.704815022316672,0.320362237703084,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0.942324577501406,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,2.34167452903441,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0,0.163565394255844,0,0,4.6488667138898,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0.392590874004102,1.1796972334774,0.366857197043358,0.808679663052368,0,0,0,0,0,1.56302802246618,3.14288033377707,0,1.33070477595341,0.0675375846183947,0,0,0,0,2.19303106742873,0,0,8.56008265185288,0.535701835878287,0,4.24875922965642,0.682986574053893,0,0,0,0.135939465953663,0,0.354581522651905,1.22354542081276,0.078493092850514,0.314231179832004,2.5224494698241,1.82631744101899,0,0,0,0,0.23248285073625,0,0,0,0,0,1.29068207646083,0,0,2.54032230114557,2.7492824225286,0,0,5.48091615809182,1.96300467230486,0.609589624911347,0,0,0,0,3.50909195193158,8.35593255677747,0,2.03302947670128,0,3.77407108916684,4.16740453782901,15.9548479167889,10.3469805199535,0,5.89191367754065,0.196308467114945,0,0.4226557275834,0,0,0,0,1.07132363163395,1.05868461514708,1.28386186702669,3.65168194123259,1.83491713361816,0,0,0.0679914901909147,0,13.7546978534004,0,0,0,0,0.327796715891087,0,3.56960904096936,3.74104367371785,2.48116228744081,4.51273570726275,0.0757786982182394,0.535928260312357,0,0.20686599172379,0,5.95161078659351,0,0,0,0.827413057616144,8.08468755832877,0.435433495793923,0,0,0.573777643141411,2.32862249582209,0.325613074443898,0,0,3.32353247794371,4.69281884806909,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr2:47606991..47607060,+ | |||
}} |
Revision as of 03:01, 21 January 2014
Short description: | p@chr2:47606991..47607060, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:47606991..47607060, + |
Coexpression cluster: | C1908_smallcell_endometrioid_small_colon_temporal_iPS_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.37e-13 | 7 |
germ cell | 6.37e-13 | 7 |
epithelial cell | 1.05e-11 | 253 |
embryonic stem cell | 1.25e-11 | 5 |
endodermal cell | 2.82e-09 | 58 |
endo-epithelial cell | 4.40e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.95e-16 | 25 |
intestine | 2.73e-15 | 17 |
subdivision of digestive tract | 9.88e-13 | 118 |
digestive system | 2.33e-12 | 145 |
digestive tract | 2.33e-12 | 145 |
primitive gut | 2.33e-12 | 145 |
endoderm-derived structure | 3.86e-11 | 160 |
endoderm | 3.86e-11 | 160 |
presumptive endoderm | 3.86e-11 | 160 |
small intestine | 7.52e-09 | 4 |
testis | 6.53e-08 | 8 |
male reproductive organ | 6.75e-08 | 11 |
large intestine | 7.11e-08 | 11 |
male organism | 1.54e-07 | 22 |
male reproductive system | 1.54e-07 | 22 |
reproductive structure | 4.77e-07 | 59 |
reproductive system | 4.77e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.85e-30 | 106 |
cell type cancer | 1.29e-23 | 143 |
adenocarcinoma | 1.49e-14 | 25 |
cancer | 5.93e-12 | 235 |
disease of cellular proliferation | 1.84e-11 | 239 |
gastrointestinal system cancer | 2.45e-10 | 14 |