FFCP PHASE1:Hg19::chr2:74212029..74212067,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-191bp_to_ENST00000441217_5end | |||
|coexpression_cluster_id=C3740 | |||
|description=CAGE_peak_1_at_ENST00000441217_5end | |||
|id=chr2:74212029..74212067,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.16e-50!172;CL:0000566!1.16e-50!172;CL:0000988!6.07e-49!182;CL:0002032!1.05e-47!165;CL:0000837!1.05e-47!165;CL:0000763!5.98e-42!112;CL:0000049!5.98e-42!112;CL:0000738!1.78e-40!140;CL:0002031!2.60e-33!124;CL:0002087!2.96e-33!119;CL:0000766!1.47e-32!76;CL:0000557!1.19e-29!71;CL:0002009!6.85e-29!65;CL:0000839!4.62e-28!70;CL:0002194!9.31e-28!63;CL:0000576!9.31e-28!63;CL:0000040!9.31e-28!63;CL:0000559!9.31e-28!63;CL:0000860!5.97e-23!45;CL:0002057!8.37e-23!42;CL:0000542!8.67e-07!53;CL:0000051!8.67e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.60e-19;33!CL:0002057;2.60e-19;33!CL:0000473;2.70e-18;39!CL:0000234;2.70e-18;39!CL:0000576;2.02e-17;48!CL:0000766;2.73e-15;69!CL:0000763;3.61e-14;100!CL:0000738;1.29e-10;136!CL:0002087;2.11e-10;104!CL:0000988;6.64e-10;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.09e-54,168;CL:0000988,1.48e-52,177;CL:0002032,1.21e-50,161;CL:0000837,1.21e-50,161;CL:0000763,2.73e-45,108;CL:0000049,2.73e-45,108;CL:0000738,4.18e-43,136;CL:0000766,4.76e-36,72;CL:0002087,9.48e-36,115;CL:0002031,1.09e-35,120;CL:0000557,8.03e-33,67;CL:0002009,3.38e-32,61;CL:0000839,4.99e-31,66;CL:0002194,6.12e-31,59;CL:0000576,6.12e-31,59;CL:0000040,6.12e-31,59;CL:0000559,6.12e-31,59;CL:0000473,2.59e-27,48;CL:0000234,2.59e-27,48;CL:0000860,5.14e-25,42;CL:0002057,5.14e-25,42;CL:0000542,6.84e-07,53;CL:0000051,6.84e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;6.11e-18;42!CL:0000049;4.42e-13;108 | |||
|ontology_enrichment_disease=DOID:162!4.70e-14!235;DOID:14566!1.44e-12!239;DOID:2531!2.41e-11!51;DOID:0060083!2.41e-11!51;DOID:1240!6.16e-10!39;DOID:8692!7.92e-09!31;DOID:0050686!9.86e-09!137;DOID:0050687!5.10e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.45e-08;31!DOID:1240;2.65e-08;39!DOID:2531;9.32e-08;51!DOID:0060083;9.32e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.32e-13,235;DOID:2531,2.43e-12,51;DOID:0060083,2.43e-12,51;DOID:14566,8.33e-12,239;DOID:1240,8.70e-11,39;DOID:0050686,2.51e-09,137;DOID:8692,2.80e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.89e-30!102;UBERON:0003061!7.89e-30!102;UBERON:0002193!2.43e-27!112;UBERON:0002371!9.43e-24!80;UBERON:0001474!6.29e-23!86;UBERON:0002405!8.47e-19!115;UBERON:0004765!4.60e-16!101;UBERON:0001434!4.60e-16!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.79e-33,98;UBERON:0003061,2.79e-33,98;UBERON:0002193,4.31e-30,108;UBERON:0002371,9.68e-27,76;UBERON:0001474,1.79e-25,82;UBERON:0002405,2.22e-25,93;UBERON:0004765,5.48e-20,90;UBERON:0001434,4.37e-16,100 | |||
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| |||
|short_description=p1@ENST00000441217 | |||
}} |
Revision as of 03:57, 21 January 2014
Short description: | p1@ENST00000441217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000441217_5end |
Coexpression cluster: | C3740_granulocyte_Neutrophils_Eosinophils_immature_acute_CD14_blood |
Association with transcript: | -191bp_to_ENST00000441217_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.09e-54 | 168 |
hematopoietic cell | 1.48e-52 | 177 |
hematopoietic oligopotent progenitor cell | 1.21e-50 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-50 | 161 |
myeloid cell | 2.73e-45 | 108 |
common myeloid progenitor | 2.73e-45 | 108 |
leukocyte | 4.18e-43 | 136 |
myeloid leukocyte | 4.76e-36 | 72 |
nongranular leukocyte | 9.48e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 1.09e-35 | 120 |
granulocyte monocyte progenitor cell | 8.03e-33 | 67 |
macrophage dendritic cell progenitor | 3.38e-32 | 61 |
myeloid lineage restricted progenitor cell | 4.99e-31 | 66 |
monopoietic cell | 6.12e-31 | 59 |
monocyte | 6.12e-31 | 59 |
monoblast | 6.12e-31 | 59 |
promonocyte | 6.12e-31 | 59 |
defensive cell | 2.59e-27 | 48 |
phagocyte | 2.59e-27 | 48 |
classical monocyte | 5.14e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.14e-25 | 42 |
lymphocyte | 6.84e-07 | 53 |
common lymphoid progenitor | 6.84e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.79e-33 | 98 |
blood island | 2.79e-33 | 98 |
hemolymphoid system | 4.31e-30 | 108 |
bone marrow | 9.68e-27 | 76 |
bone element | 1.79e-25 | 82 |
immune system | 2.22e-25 | 93 |
skeletal element | 5.48e-20 | 90 |
skeletal system | 4.37e-16 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.32e-13 | 235 |
hematologic cancer | 2.43e-12 | 51 |
immune system cancer | 2.43e-12 | 51 |
disease of cellular proliferation | 8.33e-12 | 239 |
leukemia | 8.70e-11 | 39 |
organ system cancer | 2.51e-09 | 137 |
myeloid leukemia | 2.80e-09 | 31 |