FFCP PHASE1:Hg19::chr2:113981834..113981850,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr2:113981834..113981850,- | |||
|id=chr2:113981834..113981850,- | |||
|ontology_enrichment_celltype=CL:0002149!3.66e-14!6;CL:0002255!3.66e-14!6;CL:0000159!1.72e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000159;2.04e-36;2!CL:0002149;7.10e-28;6!CL:0002255;7.10e-28;6!CL:0000319;3.91e-19;1!CL:0000313;3.91e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,1.42e-36,2;CL:0002149,7.10e-28,6;CL:0002255,7.10e-28,6;CL:0000319,2.71e-19,1;CL:0000313,3.91e-19,1 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.98e-17;10 | |||
|ontology_enrichment_disease=DOID:120!6.24e-21!27;DOID:193!2.48e-19!29;DOID:299!1.65e-18!25;DOID:3001!3.66e-14!6;DOID:4468!1.63e-11!2;DOID:2394!6.57e-09!14;DOID:305!2.42e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:120;2.47e-32;27!DOID:193;4.27e-30;29!DOID:3001;7.10e-28;6!DOID:299;7.19e-26;25!DOID:2152;3.91e-19;1!DOID:3030;3.91e-19;1!DOID:2394;4.17e-12;14!DOID:4468;1.57e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:120,2.85e-32,27;DOID:193,4.87e-30,29;DOID:3001,7.10e-28,6;DOID:299,6.59e-26,25;DOID:3030,2.71e-19,1;DOID:2152,3.91e-19,1;DOID:2394,4.68e-12,14;DOID:4468,1.57e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.67e-16!5;UBERON:0004117!1.67e-16!5;UBERON:0007689!1.67e-16!5;UBERON:0007123!1.67e-16!5;UBERON:0003091!1.67e-16!5;UBERON:0006947!1.34e-15!3;UBERON:0004054!1.34e-15!3;UBERON:0003133!1.13e-12!48;UBERON:0005904!7.95e-12!4;UBERON:0004175!1.06e-11!25;UBERON:0000341!2.34e-11!2;UBERON:0005156!7.45e-10!59;UBERON:0000990!7.45e-10!59;UBERON:0003134!1.35e-07!37;UBERON:0000474!1.35e-07!37;UBERON:0009722!1.52e-07!11;UBERON:0007690!1.52e-07!11;UBERON:0003135!2.18e-07!11;UBERON:0003100!9.83e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;3.91e-19;1!UBERON:0004911;3.91e-19;1!UBERON:0005352;3.91e-19;1!UBERON:0004175;3.75e-14;21!UBERON:0003134;4.47e-13;33!UBERON:0000474;2.79e-12;37!UBERON:0003133;1.48e-10;44!UBERON:0000341;2.27e-10;2!UBERON:0000995;2.76e-10;17!UBERON:0004909;2.99e-10;2!UBERON:0003975;9.53e-10;18!UBERON:0003100;2.02e-09;41!UBERON:0006947;2.97e-07;3!UBERON:0004054;2.97e-07;3!UBERON:0005156;4.24e-07;59!UBERON:0000990;4.24e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,3.25e-19,1;UBERON:0005352,3.25e-19,1;UBERON:0004911,3.91e-19,1;UBERON:0003133,2.20e-13,48;UBERON:0003134,2.77e-12,37;UBERON:0000474,2.77e-12,37;UBERON:0004175,5.86e-12,25;UBERON:0003100,4.29e-11,41;UBERON:0005156,7.28e-11,59;UBERON:0000990,7.28e-11,59;UBERON:0000341,2.27e-10,2;UBERON:0004909,2.99e-10,2;UBERON:0000995,1.95e-08,21;UBERON:0005795,4.44e-08,22;UBERON:0003975,4.44e-08,22;UBERON:0006947,2.79e-07,3;UBERON:0004054,2.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65092064564911,0.816164040795739,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0.284609546029793,0,4.33899345837827,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465788870628778,0,0.265841714557995,1.04349012362347,0,0,0,0,1.07410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,4.81124423942505,0,5.7332336338646,1.4541206133713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.639701945702943,2.14257988317366,0,0,0.672791175483681,0.445530107947154,21.8286564074877,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr2:113981834..113981850,- | |||
}} |
Revision as of 05:05, 21 January 2014
Short description: | p@chr2:113981834..113981850, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr2:113981834..113981850, - |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 1.42e-36 | 2 |
epithelial cell of uterus | 7.10e-28 | 6 |
stromal cell of endometrium | 7.10e-28 | 6 |
mucus secreting cell | 2.71e-19 | 1 |
serous secreting cell | 3.91e-19 | 1 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 3.25e-19 | 1 |
spermatic cord | 3.25e-19 | 1 |
epithelium of female gonad | 3.91e-19 | 1 |
reproductive organ | 2.20e-13 | 48 |
female reproductive organ | 2.77e-12 | 37 |
female reproductive system | 2.77e-12 | 37 |
internal genitalia | 5.86e-12 | 25 |
female organism | 4.29e-11 | 41 |
reproductive structure | 7.28e-11 | 59 |
reproductive system | 7.28e-11 | 59 |
throat | 2.27e-10 | 2 |
epithelium of gonad | 2.99e-10 | 2 |
uterus | 1.95e-08 | 21 |
embryonic uterus | 4.44e-08 | 22 |
internal female genitalia | 4.44e-08 | 22 |
male genital duct | 2.79e-07 | 3 |
internal male genitalia | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 2.85e-32 | 27 |
reproductive organ cancer | 4.87e-30 | 29 |
female reproductive endometrioid cancer | 7.10e-28 | 6 |
adenocarcinoma | 6.59e-26 | 25 |
mucinous adenocarcinoma | 2.71e-19 | 1 |
ovary epithelial cancer | 3.91e-19 | 1 |
ovarian cancer | 4.68e-12 | 14 |
clear cell adenocarcinoma | 1.57e-10 | 2 |