FFCP PHASE1:Hg19::chr2:192711795..192711830,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8436 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10690 | |||
|TSSclassifier=weak | |||
|UniProt=O95810 | |||
|association_with_transcript=150bp_to_ENST00000304141,uc002utb.2_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_1_at_SDPR_5end | |||
|id=chr2:192711795..192711830,- | |||
|ontology_enrichment_celltype=CL:0000213!6.68e-15!57;CL:0000215!6.68e-15!57;CL:0002139!1.35e-14!24;CL:0000115!2.11e-14!35;CL:0000222!2.88e-13!119;CL:0002078!2.67e-12!44;CL:0000071!3.69e-11!18;CL:0002546!3.69e-11!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.77e-15;24!CL:0000115;1.71e-12;36!CL:0000071;1.72e-11;18!CL:0000213;2.09e-09;58!CL:0000215;2.09e-09;58!CL:0002078;1.93e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.83e-15,58;CL:0000215,1.83e-15,58;CL:0002139,4.90e-15,24;CL:0000115,6.23e-15,36;CL:0000222,1.83e-13,121;CL:0002078,6.49e-13,45;CL:0000071,1.75e-11,18;CL:0002546,1.75e-11,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.72e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-30!115;UBERON:0001009!1.37e-18!113;UBERON:0004535!1.28e-17!110;UBERON:0004111!6.53e-17!241;UBERON:0000477!1.04e-16!286;UBERON:0000025!9.89e-15!194;UBERON:0000119!2.63e-13!312;UBERON:0000483!1.61e-12!309;UBERON:0002049!1.07e-11!79;UBERON:0007798!1.07e-11!79;UBERON:0000467!2.11e-11!625;UBERON:0004872!2.33e-11!84;UBERON:0000468!2.62e-11!659;UBERON:0001986!3.69e-11!18;UBERON:0004638!3.69e-11!18;UBERON:0004852!3.69e-11!18;UBERON:0000480!3.94e-11!626;UBERON:0000487!1.44e-10!22;UBERON:0000055!4.45e-10!69;UBERON:0003914!5.25e-10!118;UBERON:0006914!2.65e-09!25;UBERON:0000490!7.52e-09!138;UBERON:0001981!4.22e-08!60;UBERON:0007500!4.22e-08!60;UBERON:0004537!4.22e-08!60;UBERON:0006965!4.22e-08!60;UBERON:0000481!5.93e-08!347;UBERON:0000475!8.14e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.72e-11;18!UBERON:0001986;1.72e-11;18!UBERON:0004852;1.72e-11;18!UBERON:0000487;4.93e-11;22!UBERON:0006914;7.69e-10;25!UBERON:0007023;3.18e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.03e-31,114;UBERON:0001009,2.38e-18,112;UBERON:0004535,2.31e-17,109;UBERON:0004111,4.49e-16,240;UBERON:0000025,6.90e-14,192;UBERON:0000119,9.01e-13,309;UBERON:0000483,5.48e-12,306;UBERON:0004638,1.75e-11,18;UBERON:0001986,1.75e-11,18;UBERON:0004852,1.75e-11,18;UBERON:0002049,3.06e-11,78;UBERON:0007798,3.06e-11,78;UBERON:0000487,5.05e-11,22;UBERON:0004872,1.25e-10,83;UBERON:0006914,7.94e-10,25;UBERON:0000055,1.15e-09,68;UBERON:0003914,2.74e-09,117;UBERON:0000490,8.57e-08,148;UBERON:0007500,1.37e-07,59;UBERON:0001981,1.37e-07,59;UBERON:0004537,1.37e-07,59;UBERON:0006965,1.37e-07,59;UBERON:0010314,2.07e-07,132 | |||
|phase1_expression=11.082381135504,22.2664544846622,60.3284849530757,63.0461779624722,34.8629653653284,178.829397440576,7.59899634504932,0.631719873426831,0.522371256399677,22.6075221581388,32.7966548947041,7.8638893966862,1.05506791291381,4.82688776544182,7.62213964174206,0.672325146451775,0,0,0.975865597581014,1.72369481307503,3.67201244239655,0,0,0.547497700291537,0.125542639594803,0,0.0821005894499457,0,9.4407426443737,13.4340289334024,2.78669021968937,2.75826367343678,0.6024118375565,0.369754010166788,0,0,28.772843054815,4.9859586767869,1.60435557976113,0.868043482863407,1.79132379391939,0.647787332037959,0.257575567634187,0.581592955118259,0.377875943688809,0,0,0,1.23882548358041,1.1507695692886,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.941211697713023,0.545812300115692,0.674170453335254,0.306083892370903,0.962787081228281,0,1.9791078011203,0.598390972864896,0.426224750532694,1.45104619314292,0,1.24564449799115,0.502497330513487,0.521482918420201,1.52032191293582,12.7133895553007,0.368277635987565,0.632924774881769,0.422510572623884,0,0.209658645508376,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0,1.75996244461323,4.36910889009705,0,1.28019066769952,1.20118796110804,27.5881171178152,1.32208974556972,1.90810750907073,1.70763890732835,1.76171156811282,0.764546456250458,48.9033915742396,11.2101712596307,37.663924122836,0,1.17903228824749,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,3.74792179657038,1.4206635122641,0,0,0.534880391567015,0.289648807765598,41.4471672733735,42.9248550210327,186.423615167867,5.42158728576849,0,0.579386075843295,0,0.486634870302636,17.4889411753526,11.7516580655159,8.95914814069886,32.9412374876747,0.364295288292542,1.48313777113772,8.43823223502177,9.0547463395619,6.78085598646212,1.19245312152671,0,1.48583000531826,95.4059555360184,83.4427557252941,132.260531112493,155.459684029103,106.133357361106,101.243439433945,81.7170319158929,360.749795800383,430.477177850919,476.976873189655,213.096708750739,299.547209653094,346.812183775949,255.525840840379,70.4823494657131,372.647766129465,256.861602284338,198.98448601403,101.188980727483,130.049395360834,110.653853333966,17.1314542666882,23.2668158488995,0.872188104285069,5.96366342034382,43.5608960126154,70.5740933734456,88.3456791906346,36.1761749842324,87.4657056221999,5.33744978648525,2.71334303258876,90.8736223367318,12.2586711583416,18.6346569549343,15.2871001921381,13.82822218752,3.28050004567315,1.87296046098192,31.9464220064892,3.13842229158782,5.75429043354448,3.88495066483516,5.33713065468544,6.32877930890169,7.61572767332961,3.82305390350332,3.56400857184616,3.95627086845691,26.3946794962028,2.87447256726495,11.2785196349224,4.25402967564678,14.4073340051775,4.82875382968922,0.30648779579902,2.85452311922534,38.9072388238872,27.0878349890182,7.47450860864986,5.72216133130817,11.7035527472917,5.25567899116038,57.9691215102666,24.7535418921014,11.8143432568886,6.9180273664451,4.54380793639406,2.11714766877288,17.1344820227941,26.6257194387461,11.8887475908616,3.22165125389926,2.89891279744945,1.36373060295417,2.58124135850103,0,0,0.348581828608555,0.414644220061482,0.504641701751257,0,0,0,0,2.3218396401599,1.44375896333917,0.354920400119532,0.842923450390509,0.482022059766964,0.330881918197182,0.435758888184812,0.237270619111097,0,0.196221465125346,0,402.294722770433,67.316051425654,52.2698994390878,30.8718293909638,1.26755034821831,0.982827216677626,62.0329402015474,0,0.245976877086227,20.9312728564201,3.07300799144152,1.1240175325762,0.603173834469785,1.20364978706088,1.3032332212413,12.4792174233549,33.1962086658129,2.31860809950154,11.5060520351105,93.6938245969369,89.3562039272859,163.808825073989,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,2.01578553838631,0.567100388969546,6.62733068001077,23.8319829581449,34.504441124869,8915.72661620289,491.046116491762,480.79389993905,1657.66770420189,359.412207964904,0.063497894292169,0,0,5.13217338068116,0.205654985406647,0,0,47.9921040998144,93.7314147991552,48.9899749283946,1.03417372606222,10.7296933755565,0.845302752556,1.32969058292435,6.24044621468197,0.257207374262142,0,0.532844358032199,66.9137010320131,1.08524321078289,1.64648067356154,1.62868092146868,59.3504554400051,2.37585561880029,54.8619666248447,44.448206388615,65.7822281977935,1.2162378064119,0,0,0.239624855491583,1.14861935834114,35.6592262601796,25.4815099734939,34.1090695433636,72.5196901121577,0,0,0,0.128343036279748,0,1.30139853857622,0,0.167516265334349,0,17.2271615507852,74.7903648010062,45.1712909645279,10.3060853044078,6.5022167737758,1.62759014219841,15.1818728917489,1.96271887676878,2.83864347061082,1.63997980989798,3.61135319673263,2.27407504055985,6.2083842775503,1.32845119707087,1.65932251687533,5.03924963914881,5.87403472388222,14.0688803762451,22.9512508996405,18.1199928687638,12.0602140317892,0.909382714338778,9.98612637062982,2.41912234663744,25.3069963975152,18.7223607411436,12.0683840606222,69.9639754936127,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| |||
|short_description=p1@SDPR | |||
}} |
Revision as of 07:39, 21 January 2014
Short description: | p1@SDPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SDPR_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 150bp_to_ENST00000304141, uc002utb.2_5end |
EntrezGene: | SDPR |
HGNC: | 10690 |
UniProt: | O95810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.83e-15 | 58 |
barrier cell | 1.83e-15 | 58 |
endothelial cell of vascular tree | 4.90e-15 | 24 |
endothelial cell | 6.23e-15 | 36 |
mesodermal cell | 1.83e-13 | 121 |
meso-epithelial cell | 6.49e-13 | 45 |
blood vessel endothelial cell | 1.75e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.75e-11 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.03e-31 | 114 |
circulatory system | 2.38e-18 | 112 |
cardiovascular system | 2.31e-17 | 109 |
anatomical conduit | 4.49e-16 | 240 |
tube | 6.90e-14 | 192 |
cell layer | 9.01e-13 | 309 |
epithelium | 5.48e-12 | 306 |
blood vessel endothelium | 1.75e-11 | 18 |
endothelium | 1.75e-11 | 18 |
cardiovascular system endothelium | 1.75e-11 | 18 |
vasculature | 3.06e-11 | 78 |
vascular system | 3.06e-11 | 78 |
simple squamous epithelium | 5.05e-11 | 22 |
splanchnic layer of lateral plate mesoderm | 1.25e-10 | 83 |
squamous epithelium | 7.94e-10 | 25 |
vessel | 1.15e-09 | 68 |
epithelial tube | 2.74e-09 | 117 |
unilaminar epithelium | 8.57e-08 | 148 |
epithelial tube open at both ends | 1.37e-07 | 59 |
blood vessel | 1.37e-07 | 59 |
blood vasculature | 1.37e-07 | 59 |
vascular cord | 1.37e-07 | 59 |
structure with developmental contribution from neural crest | 2.07e-07 | 132 |