Personal tools

FFCP PHASE1:Hg19::chr2:235214861..235214870,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C80|description=CAGE_peak_at_chr2:235214861..235214870,+|id=chr2:235214861..235214870,+|ontology_enrichment_celltype=CL:0000453!1.12e-27!5;CL:0000763!1.62e-27!112;CL:0000049!1.62e-27!112;CL:0000766!6.10e-27!76;CL:0000557!3.34e-26!71;CL:0002057!4.21e-26!42;CL:0000738!7.15e-25!140;CL:0000860!3.79e-24!45;CL:0000839!5.25e-21!70;CL:0002009!1.96e-20!65;CL:0000037!3.44e-19!172;CL:0000566!3.44e-19!172;CL:0000767!5.85e-18!3;CL:0000988!8.04e-18!182;CL:0000451!9.02e-18!10;CL:0002032!5.85e-17!165;CL:0000837!5.85e-17!165;CL:0002194!5.02e-16!63;CL:0000576!5.02e-16!63;CL:0000040!5.02e-16!63;CL:0000559!5.02e-16!63;CL:0000990!2.67e-15!8;CL:0002031!3.12e-13!124;CL:0001014!8.15e-13!2;CL:0001016!8.15e-13!2;CL:0002274!1.85e-10!5;CL:0000457!1.85e-10!5;CL:0002191!1.85e-10!5;CL:0000097!1.85e-10!5;CL:0000831!1.85e-10!5;CL:0002028!1.85e-10!5;CL:0002393!1.06e-09!9;CL:0002397!1.06e-09!9;CL:0002087!3.29e-08!119;CL:0000875!5.25e-08!3;CL:0002396!5.25e-08!3;CL:0000094!5.18e-07!8;CL:0000134!6.36e-07!358|ontology_enrichment_celltype_v019=CL:0001014;4.61e-131;2!CL:0001016;4.61e-131;2!CL:0000453;2.19e-53;5!CL:0000840;9.76e-45;5!CL:0000990;2.66e-30;8!CL:0000451;4.86e-25;10!CL:0000767;4.09e-23;3!CL:0000094;1.47e-09;8!CL:0000081;2.63e-07;11|ontology_enrichment_celltype_v019_2=CL:0001014,4.61e-131,2;CL:0001016,4.61e-131,2;CL:0000453,2.19e-53,5;CL:0000840,9.76e-45,5;CL:0001029,9.76e-45,5;CL:0000990,2.66e-30,8;CL:0000451,4.86e-25,10;CL:0000767,4.09e-23,3;CL:0000094,1.47e-09,8;CL:0000081,2.63e-07,11|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!3.30e-23!86;UBERON:0002371!8.43e-23!80;UBERON:0004765!2.67e-21!101;UBERON:0001434!2.67e-21!101;UBERON:0002390!6.70e-19!102;UBERON:0003061!6.70e-19!102;UBERON:0002193!8.04e-17!112;UBERON:0002405!1.35e-14!115;UBERON:0002204!4.68e-11!167;UBERON:0002384!4.62e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97419063809651,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:235214861..235214870,+}}
{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C80
|description=CAGE_peak_at_chr2:235214861..235214870,+
|id=chr2:235214861..235214870,+
|ontology_enrichment_celltype=CL:0000453!1.12e-27!5;CL:0000763!1.62e-27!112;CL:0000049!1.62e-27!112;CL:0000766!6.10e-27!76;CL:0000557!3.34e-26!71;CL:0002057!4.21e-26!42;CL:0000738!7.15e-25!140;CL:0000860!3.79e-24!45;CL:0000839!5.25e-21!70;CL:0002009!1.96e-20!65;CL:0000037!3.44e-19!172;CL:0000566!3.44e-19!172;CL:0000767!5.85e-18!3;CL:0000988!8.04e-18!182;CL:0000451!9.02e-18!10;CL:0002032!5.85e-17!165;CL:0000837!5.85e-17!165;CL:0002194!5.02e-16!63;CL:0000576!5.02e-16!63;CL:0000040!5.02e-16!63;CL:0000559!5.02e-16!63;CL:0000990!2.67e-15!8;CL:0002031!3.12e-13!124;CL:0001014!8.15e-13!2;CL:0001016!8.15e-13!2;CL:0002274!1.85e-10!5;CL:0000457!1.85e-10!5;CL:0002191!1.85e-10!5;CL:0000097!1.85e-10!5;CL:0000831!1.85e-10!5;CL:0002028!1.85e-10!5;CL:0002393!1.06e-09!9;CL:0002397!1.06e-09!9;CL:0002087!3.29e-08!119;CL:0000875!5.25e-08!3;CL:0002396!5.25e-08!3;CL:0000094!5.18e-07!8;CL:0000134!6.36e-07!358
|ontology_enrichment_celltype_v019=CL:0001014;4.61e-131;2!CL:0001016;4.61e-131;2!CL:0000453;2.19e-53;5!CL:0000840;9.76e-45;5!CL:0000990;2.66e-30;8!CL:0000451;4.86e-25;10!CL:0000767;4.09e-23;3!CL:0000094;1.47e-09;8!CL:0000081;2.63e-07;11
|ontology_enrichment_celltype_v019_2=CL:0001014,4.61e-131,2;CL:0001016,4.61e-131,2;CL:0000453,2.19e-53,5;CL:0000840,9.76e-45,5;CL:0001029,9.76e-45,5;CL:0000990,2.66e-30,8;CL:0000451,4.86e-25,10;CL:0000767,4.09e-23,3;CL:0000094,1.47e-09,8;CL:0000081,2.63e-07,11
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001474!3.30e-23!86;UBERON:0002371!8.43e-23!80;UBERON:0004765!2.67e-21!101;UBERON:0001434!2.67e-21!101;UBERON:0002390!6.70e-19!102;UBERON:0003061!6.70e-19!102;UBERON:0002193!8.04e-17!112;UBERON:0002405!1.35e-14!115;UBERON:0002204!4.68e-11!167;UBERON:0002384!4.62e-07!375
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97419063809651,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr2:235214861..235214870,+
}}

Revision as of 09:19, 21 January 2014

Short description:p@chr2:235214861..235214870, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr2:235214861..235214870, +
Coexpression cluster:C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
1
2
3
4
5
6
7
8




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr2:235214861..235214870,%2B&oldid=3185136"