FFCP PHASE1:Hg19::chr20:48211053..48211065,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr20:48211053..48211065,+ | |||
|id=chr20:48211053..48211065,+ | |||
|ontology_enrichment_celltype=CL:0002127!2.84e-10!1;CL:0000914!2.84e-10!1;CL:0000911!2.84e-10!1;CL:0000814!2.84e-10!1;CL:0002042!2.84e-10!1;CL:0002039!2.84e-10!1;CL:0002040!2.84e-10!1;CL:0002041!2.84e-10!1;CL:0002574!9.82e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.16e-29;1!CL:0000911;3.16e-29;1!CL:0000814;3.16e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.20e-29,1;CL:0000914,4.20e-29,1;CL:0000911,4.20e-29,1;CL:0000814,4.20e-29,1;CL:0002042,4.20e-29,1;CL:0002039,4.20e-29,1;CL:0002040,4.20e-29,1;CL:0002041,4.20e-29,1;CL:0000893,2.74e-15,2;CL:0002489,2.74e-15,2;CL:0000809,2.74e-15,2;CL:0000808,2.74e-15,2;CL:0000894,2.74e-15,2;CL:0000806,2.74e-15,2;CL:0000807,2.74e-15,2;CL:0000805,2.74e-15,2;CL:0002425,2.74e-15,2 | |||
|ontology_enrichment_development_v019=CL:0002425;2.37e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.61e-08,4;UBERON:0005058,2.61e-08,4;UBERON:0009113,2.61e-08,4;UBERON:0003295,2.61e-08,4;UBERON:0005562,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67186495390678,0,0,0,5.79334375802903,0.294605907474837,0,0,13.3214972514702,8.06367954871245,1.47994114143309,0.829050053357545,0.289803085735052,0,0,0,3.62589896632212,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:48211053..48211065,+ | |||
}} |
Revision as of 11:56, 21 January 2014
Short description: | p@chr20:48211053..48211065, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48211053..48211065, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.20e-29 | 1 |
immature NK T cell | 4.20e-29 | 1 |
effector T cell | 4.20e-29 | 1 |
mature NK T cell | 4.20e-29 | 1 |
immature NK T cell stage IV | 4.20e-29 | 1 |
immature NK T cell stage I | 4.20e-29 | 1 |
immature NK T cell stage II | 4.20e-29 | 1 |
immature NK T cell stage III | 4.20e-29 | 1 |
thymocyte | 2.74e-15 | 2 |
double negative thymocyte | 2.74e-15 | 2 |
double-positive, alpha-beta thymocyte | 2.74e-15 | 2 |
DN4 thymocyte | 2.74e-15 | 2 |
DN1 thymic pro-T cell | 2.74e-15 | 2 |
DN2 thymocyte | 2.74e-15 | 2 |
DN3 thymocyte | 2.74e-15 | 2 |
immature single positive thymocyte | 2.74e-15 | 2 |
early T lineage precursor | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.61e-08 | 4 |
hemolymphoid system gland | 2.61e-08 | 4 |
thymic region | 2.61e-08 | 4 |
pharyngeal gland | 2.61e-08 | 4 |
thymus primordium | 2.61e-08 | 4 |