FFCP PHASE1:Hg19::chr20:48429356..48429458,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23315 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20728 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2E8,B7Z3B1,B4DIV9 | |||
|association_with_transcript=0bp_to_ENST00000361573,ENST00000489787,ENST00000539601,ENST00000541138_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_SLC9A8_5end | |||
|id=chr20:48429356..48429458,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.57e-45!140;CL:0002031!2.83e-36!124;CL:0000988!4.14e-35!182;CL:0000037!1.50e-34!172;CL:0000566!1.50e-34!172;CL:0002087!7.00e-34!119;CL:0002032!6.51e-32!165;CL:0000837!6.51e-32!165;CL:0000766!5.70e-28!76;CL:0002057!1.65e-25!42;CL:0000557!2.43e-24!71;CL:0000839!3.91e-23!70;CL:0000860!4.78e-23!45;CL:0002009!1.69e-21!65;CL:0002194!1.02e-20!63;CL:0000576!1.02e-20!63;CL:0000040!1.02e-20!63;CL:0000559!1.02e-20!63;CL:0000763!1.87e-19!112;CL:0000049!1.87e-19!112;CL:0000838!4.33e-12!52;CL:0000542!1.28e-11!53;CL:0000051!1.28e-11!53;CL:0000791!2.59e-08!18;CL:0000789!2.59e-08!18;CL:0002420!2.59e-08!18;CL:0002419!2.59e-08!18;CL:0000790!2.59e-08!18;CL:0000134!7.65e-08!358;CL:0002320!2.82e-07!365;CL:0000084!9.14e-07!25;CL:0000827!9.14e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-19;33!CL:0002057;2.25e-19;33!CL:0000576;1.43e-16;48!CL:0000473;1.76e-16;39!CL:0000234;1.76e-16;39!CL:0000766;1.34e-14;69!CL:0002087;6.99e-12;104!CL:0000738;6.23e-10;136!CL:0000791;2.62e-08;18!CL:0000789;2.62e-08;18!CL:0002419;2.62e-08;18!CL:0000542;3.11e-07;53!CL:0000084;9.57e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.64e-47,136;CL:0002031,3.07e-38,120;CL:0000988,7.72e-37,177;CL:0000037,5.34e-36,168;CL:0002087,8.25e-36,115;CL:0002032,2.53e-33,161;CL:0000837,2.53e-33,161;CL:0000766,2.20e-30,72;CL:0000557,1.26e-26,67;CL:0000473,9.82e-26,48;CL:0000234,9.82e-26,48;CL:0000860,1.65e-25,42;CL:0002057,1.65e-25,42;CL:0000839,2.37e-25,66;CL:0002009,1.01e-23,61;CL:0002194,6.25e-23,59;CL:0000576,6.25e-23,59;CL:0000040,6.25e-23,59;CL:0000559,6.25e-23,59;CL:0000763,8.95e-21,108;CL:0000049,8.95e-21,108;CL:0000838,4.33e-12,52;CL:0000542,1.28e-11,53;CL:0000051,1.28e-11,53;CL:0000791,2.59e-08,18;CL:0000789,2.59e-08,18;CL:0002420,2.59e-08,18;CL:0002419,2.59e-08,18;CL:0000790,2.59e-08,18;CL:0000134,3.61e-08,354;CL:0002320,1.39e-07,361;CL:0000084,9.14e-07,25;CL:0000827,9.14e-07,25;CL:0000219,9.48e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.96e-19;42!CL:0000790;2.62e-08;18!CL:0000051;3.11e-07;53!CL:0000049;9.74e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-28!102;UBERON:0003061!1.23e-28!102;UBERON:0002193!1.42e-27!112;UBERON:0002371!3.62e-21!80;UBERON:0002405!1.91e-20!115;UBERON:0001474!3.38e-18!86;UBERON:0004765!1.61e-12!101;UBERON:0001434!1.61e-12!101;UBERON:0007023!2.72e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.47e-30,98;UBERON:0003061,1.47e-30,98;UBERON:0002193,2.67e-29,108;UBERON:0002405,8.48e-24,93;UBERON:0002371,5.16e-23,76;UBERON:0001474,9.69e-20,82;UBERON:0004765,8.79e-15,90;UBERON:0001434,1.93e-12,100;UBERON:0007023,2.48e-10,114;UBERON:0003081,5.03e-07,203;UBERON:0002384,9.32e-07,371 | |||
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| |||
|short_description=p1@SLC9A8 | |||
}} |
Revision as of 11:58, 21 January 2014
Short description: | p1@SLC9A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC9A8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000361573, ENST00000489787, ENST00000539601, ENST00000541138_5end |
EntrezGene: | SLC9A8 |
HGNC: | 20728 |
UniProt: | Q9Y2E8B7Z3B1B4DIV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.47e-30 | 98 |
blood island | 1.47e-30 | 98 |
hemolymphoid system | 2.67e-29 | 108 |
immune system | 8.48e-24 | 93 |
bone marrow | 5.16e-23 | 76 |
bone element | 9.69e-20 | 82 |
skeletal element | 8.79e-15 | 90 |
skeletal system | 1.93e-12 | 100 |
adult organism | 2.48e-10 | 114 |
lateral plate mesoderm | 5.03e-07 | 203 |
connective tissue | 9.32e-07 | 371 |