FFCP PHASE1:Hg19::chr22:26346329..26346352,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_at_chr22:26346329..26346352,+ | |||
|id=chr22:26346329..26346352,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.17e-12!24;CL:0000826!6.17e-12!24;CL:0000838!3.94e-08!52;CL:0000542!5.97e-08!53;CL:0000051!5.97e-08!53;CL:0000946!4.34e-07!1;CL:0000786!4.34e-07!1;CL:0000980!4.34e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002567;3.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!6.59e-08!1;DOID:0050177!6.59e-08!1;DOID:0050427!6.59e-08!1;DOID:0060060!2.66e-07!1;DOID:0060061!2.66e-07!1;DOID:8691!2.66e-07!1;DOID:178!2.83e-07!1;DOID:326!2.83e-07!1;DOID:3978!2.83e-07!1;DOID:3394!2.83e-07!1;DOID:5844!2.83e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.84e-34;1!DOID:0050177;1.84e-34;1!DOID:0050427;1.84e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.84e-34,1;DOID:0050177,1.84e-34,1;DOID:0050427,1.84e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.18e-14!7;UBERON:0002106!3.67e-09!3;UBERON:0004854!3.67e-09!3;UBERON:0009034!3.67e-09!3;UBERON:0002095!3.67e-09!3;UBERON:0004782!3.67e-09!3;UBERON:0003281!3.67e-09!3;UBERON:0009664!3.67e-09!3;UBERON:0002296!3.67e-09!3;UBERON:0005602!3.67e-09!3;UBERON:0001179!3.67e-09!3;UBERON:0006293!3.67e-09!3;UBERON:0005418!1.10e-07!1;UBERON:0001389!1.10e-07!1;UBERON:0000026!1.10e-07!1;UBERON:0008784!1.10e-07!1;UBERON:0006058!1.10e-07!1;UBERON:0003663!1.10e-07!1;UBERON:0001383!1.10e-07!1;UBERON:0004256!1.10e-07!1;UBERON:0002529!1.10e-07!1;UBERON:0004708!1.10e-07!1;UBERON:0002101!1.10e-07!1;UBERON:0004709!1.10e-07!1;UBERON:0003661!1.10e-07!1;UBERON:0002471!1.10e-07!1;UBERON:0004357!1.10e-07!1;UBERON:0009872!1.10e-07!1;UBERON:0004347!1.10e-07!1;UBERON:0005420!1.10e-07!1;UBERON:0005732!1.10e-07!1;UBERON:0006057!1.10e-07!1;UBERON:0000978!1.10e-07!1;UBERON:0002103!1.10e-07!1;UBERON:0001665!1.10e-07!1;UBERON:0003823!1.10e-07!1;UBERON:0000154!1.10e-07!1;UBERON:0005733!1.10e-07!1;UBERON:0005730!1.10e-07!1;UBERON:0000989!1.25e-07!1;UBERON:0008811!1.25e-07!1;UBERON:0006258!1.25e-07!1;UBERON:0005876!1.25e-07!1;UBERON:0004874!1.25e-07!1;UBERON:0007023!1.77e-07!115;UBERON:0001154!1.95e-07!1;UBERON:0001153!1.95e-07!1;UBERON:0002146!2.07e-07!1;UBERON:0005623!2.07e-07!1;UBERON:0002370!2.08e-07!4;UBERON:0005058!2.08e-07!4;UBERON:0009113!2.08e-07!4;UBERON:0003295!2.08e-07!4;UBERON:0005562!2.08e-07!4;UBERON:0007190!3.62e-07!1;UBERON:0002581!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.03e-66;2!UBERON:0005058;2.03e-66;2!UBERON:0009113;2.03e-66;2!UBERON:0004177;1.10e-59;5!UBERON:0005057;1.10e-59;5!UBERON:0002106;2.31e-12;3!UBERON:0000077;8.62e-12;27!UBERON:0002405;8.62e-12;27!UBERON:0002390;4.98e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.03e-43,7;UBERON:0005057,6.03e-43,7;UBERON:0002370,8.36e-34,4;UBERON:0005058,8.36e-34,4;UBERON:0009113,8.36e-34,4;UBERON:0003295,8.36e-34,4;UBERON:0005562,8.36e-34,4;UBERON:0003351,6.07e-23,6;UBERON:0000974,3.25e-14,10;UBERON:0003408,3.25e-14,10;UBERON:0001042,3.25e-14,10;UBERON:0009145,3.25e-14,10;UBERON:0006562,5.10e-13,11;UBERON:0009722,5.10e-13,11;UBERON:0007690,5.10e-13,11;UBERON:0002106,2.07e-12,3;UBERON:0004854,2.07e-12,3;UBERON:0009034,2.07e-12,3;UBERON:0002095,2.07e-12,3;UBERON:0004782,2.07e-12,3;UBERON:0003281,2.07e-12,3;UBERON:0009664,2.07e-12,3;UBERON:0002296,2.07e-12,3;UBERON:0005602,2.07e-12,3;UBERON:0001179,2.07e-12,3;UBERON:0006293,2.07e-12,3;UBERON:0000077,4.97e-11,29;UBERON:0008814,2.42e-08,18;UBERON:0001557,5.94e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.821005894499457,0.550975469195755,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,2.99823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,2.19602293442421,2.29676442894674,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,5.77023286145819 | |||
|short_description=p@chr22:26346329..26346352,+ | |||
}} |
Revision as of 15:01, 21 January 2014
Short description: | p@chr22:26346329..26346352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:26346329..26346352, + |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 6.03e-43 | 7 |
immune organ | 6.03e-43 | 7 |
thymus | 8.36e-34 | 4 |
hemolymphoid system gland | 8.36e-34 | 4 |
thymic region | 8.36e-34 | 4 |
pharyngeal gland | 8.36e-34 | 4 |
thymus primordium | 8.36e-34 | 4 |
pharyngeal epithelium | 6.07e-23 | 6 |
neck | 3.25e-14 | 10 |
gland of gut | 3.25e-14 | 10 |
chordate pharynx | 3.25e-14 | 10 |
pharyngeal region of foregut | 3.25e-14 | 10 |
pharynx | 5.10e-13 | 11 |
entire pharyngeal arch endoderm | 5.10e-13 | 11 |
early pharyngeal endoderm | 5.10e-13 | 11 |
spleen | 2.07e-12 | 3 |
gastrointestinal system mesentery | 2.07e-12 | 3 |
stomach region | 2.07e-12 | 3 |
mesentery | 2.07e-12 | 3 |
gastrointestinal system serosa | 2.07e-12 | 3 |
mesentery of stomach | 2.07e-12 | 3 |
gut mesentery | 2.07e-12 | 3 |
dorsal mesentery | 2.07e-12 | 3 |
dorsal mesogastrium | 2.07e-12 | 3 |
peritoneal cavity | 2.07e-12 | 3 |
spleen primordium | 2.07e-12 | 3 |
mixed endoderm/mesoderm-derived structure | 4.97e-11 | 29 |
pharyngeal arch system | 2.42e-08 | 18 |
upper respiratory tract | 5.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.84e-34 | 1 |
monogenic disease | 1.84e-34 | 1 |
xeroderma pigmentosum | 1.84e-34 | 1 |