FFCP PHASE1:Hg19::chr22:39929076..39929081,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=91582 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28749 | |||
|TSSclassifier=strong | |||
|UniProt=Q86WX3 | |||
|association_with_transcript=-216bp_to_ENST00000334678,NM_194326,uc003ayb.2_5end | |||
|description=CAGE_peak_3_at_RPS19BP1_5end | |||
|id=chr22:39929076..39929081,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.71e-08;1!CL:0000786;1.71e-08;1!CL:0000817;2.52e-08;1!CL:0002032;6.18e-08;1!CL:0002127;6.18e-08;1!CL:0000911;6.18e-08;1!CL:0000557;6.18e-08;1!CL:0000814;6.18e-08;1!CL:0000945;5.78e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,2.11e-10,3;CL:0000946,1.65e-08,1;CL:0000786,1.65e-08,1;CL:0000980,1.65e-08,1;CL:0002127,3.83e-08,1;CL:0000914,3.83e-08,1;CL:0000911,3.83e-08,1;CL:0000814,3.83e-08,1;CL:0002042,3.83e-08,1;CL:0002039,3.83e-08,1;CL:0002040,3.83e-08,1;CL:0002041,3.83e-08,1;CL:0000838,2.76e-07,52;CL:0000542,3.97e-07,53;CL:0000051,3.97e-07,53;CL:0000945,4.89e-07,24;CL:0000826,4.89e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.49e-37!239;DOID:162!3.54e-37!235;DOID:0050687!3.80e-26!143;DOID:305!4.31e-23!106;DOID:0050686!2.08e-18!137;DOID:2531!4.92e-13!51;DOID:0060083!4.92e-13!51;DOID:299!2.11e-10!25;DOID:1749!3.49e-09!14;DOID:1240!1.28e-08!39;DOID:0060058!2.41e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.97e-08;1!DOID:1799;6.18e-08;1!DOID:10165;6.18e-08;1!DOID:1798;6.18e-08;1!DOID:9119;6.18e-08;1!DOID:1749;8.01e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.08e-09,51;DOID:0060083,2.08e-09,51;DOID:2355,1.91e-08,1;DOID:162,2.19e-08,235;DOID:9119,3.11e-08,1;DOID:14566,3.97e-08,239;DOID:1749,7.60e-08,14;DOID:1240,1.02e-07,39;DOID:1799,1.21e-07,1;DOID:10165,1.21e-07,1;DOID:1798,1.21e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;6.18e-08;1!UBERON:0003703;6.18e-08;1!UBERON:0001174;6.18e-08;1!UBERON:0004914;6.18e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.34e-08,1;UBERON:0003703,3.34e-08,1;UBERON:0001174,3.34e-08,1;UBERON:0004914,3.34e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.92960640696362,1.84820002233648,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0,0,0.419317291016752,0,0.300353785683013,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79336230389644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0.371606350251437,2.30830740762312,0.782560276832555,0.637705090915289,0,0.191505370132367,0,0,0.561594356226918,0.456469358066384,0,0,0,0.1605880751037,0,1.27753871307098,0,0.307240764308458,0,0,0,0,0,0,1.99843180798692,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.659215496907038,1.47787785689595,0,0,0.755798243562828,0.102268682502155,1.47701766553283,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0.524759999977174,0,0.682760689712998,0.254253650292766,0.236387681767936,0.689486746482929,0,0,0,0,0,0,0.295547618953547,0,0.653630781113941,0,0,0.341826167541004,0,0.0897576444097721,0,0,0,0,3.06579894587209,0,0.498635045700469,0,0.19606253431774,0.167821586975843,4.17458211993207,0.317873157960757,1.26598838716816,0,0.706765357169704,0,0,0,0,0,0,0,0.067401132980677,0,0,0.91227394607833,0.978323094660449,0,0,0,0,0,2.1045278718029,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.195984794828755,0.609414446062818,0.17472666824203,0,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0.144090417154106,0.114536596165916,0.171594997861965,0.288109595976299,0.124252535565433,0.235694034616795,0.543616824294456,0.104602846312333,0,0,0,0,1.27746588066972,0,1.05154941711726,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0.0674035438541849,0.0984274815147488,3.55627994676295,0,0,0,0,0,0.674921674654501,1.5476039091159,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0.738832686744051,0,0.113312091520126,0,0,0,0,0.171086837884329,1.40963004463334,0,0,0,0,0,0.243585196761792,2.55336503108073,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0.276697269872462,0.999843263696853,1.06154382279153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,2.08795433572169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0.327609848846413,0.491545817507439,0.633936370075881,0,0.320075189082423,0.688859918643263,0,0,0,0,0.76736622782191,0.215649622793364,0.629063767423586,1.41972529649618,0,0.425149840203366,0.123935764259002,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0.11796972334774,0.917142992608395,1.5018336599544,0,0,0,0,0,0,1.04762677792569,0.818859587550484,1.92212912082159,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,4.95506146489851,0,0,0,0.590969204419841,0.222462803784138,0,0,0,0,0,0.47775168788705,0.0714765441766563,0.316027223465453,1.16241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.68732060563215,0,0,0.335566295393377,0.98150233615243,0.243835849964539,0,0,0,0,0,0.596852325484105,0,0.5647304101948,0.109940516745429,0,0,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0,0.0939839179798536,0,0.599646935549574,0.71421575442263,1.05868461514708,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.506794004045748,0.203977659483963,0.534434810531121,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0,0.784923038064294,0,0,0,0,0.0673520530145875,0,0,0.651226148887796,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |||
|short_description=p3@RPS19BP1 | |||
}} |
Revision as of 16:07, 21 January 2014
Short description: | p3@RPS19BP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RPS19BP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -216bp_to_ENST00000334678, NM_194326, uc003ayb.2_5end |
EntrezGene: | RPS19BP1 |
HGNC: | 28749 |
UniProt: | Q86WX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 2.11e-10 | 3 |
antibody secreting cell | 1.65e-08 | 1 |
plasma cell | 1.65e-08 | 1 |
plasmablast | 1.65e-08 | 1 |
innate effector T cell | 3.83e-08 | 1 |
immature NK T cell | 3.83e-08 | 1 |
effector T cell | 3.83e-08 | 1 |
mature NK T cell | 3.83e-08 | 1 |
immature NK T cell stage IV | 3.83e-08 | 1 |
immature NK T cell stage I | 3.83e-08 | 1 |
immature NK T cell stage II | 3.83e-08 | 1 |
immature NK T cell stage III | 3.83e-08 | 1 |
lymphoid lineage restricted progenitor cell | 2.76e-07 | 52 |
lymphocyte | 3.97e-07 | 53 |
common lymphoid progenitor | 3.97e-07 | 53 |
lymphocyte of B lineage | 4.89e-07 | 24 |
pro-B cell | 4.89e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.34e-08 | 1 |
extrahepatic bile duct | 3.34e-08 | 1 |
common bile duct | 3.34e-08 | 1 |
duodenal papilla | 3.34e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.08e-09 | 51 |
immune system cancer | 2.08e-09 | 51 |
anemia | 1.91e-08 | 1 |
cancer | 2.19e-08 | 235 |
acute myeloid leukemia | 3.11e-08 | 1 |
disease of cellular proliferation | 3.97e-08 | 239 |
squamous cell carcinoma | 7.60e-08 | 14 |
leukemia | 1.02e-07 | 39 |
islet cell tumor | 1.21e-07 | 1 |
endocrine pancreas cancer | 1.21e-07 | 1 |
pancreatic endocrine carcinoma | 1.21e-07 | 1 |