FFCP PHASE1:Hg19::chr22:50629033..50629048,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80305 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28805 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H4I3 | |||
|association_with_transcript=6bp_to_ENST00000395827,uc003bju.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_TRABD_5end | |||
|id=chr22:50629033..50629048,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.02e-57!172;CL:0000566!4.02e-57!172;CL:0000988!1.20e-55!182;CL:0000738!7.82e-55!140;CL:0002032!1.50e-52!165;CL:0000837!1.50e-52!165;CL:0002031!8.95e-45!124;CL:0002087!1.50e-42!119;CL:0000763!1.89e-32!112;CL:0000049!1.89e-32!112;CL:0000766!9.20e-30!76;CL:0000557!9.57e-26!71;CL:0000839!9.71e-25!70;CL:0002057!3.73e-23!42;CL:0002009!8.10e-23!65;CL:0002194!2.67e-22!63;CL:0000576!2.67e-22!63;CL:0000040!2.67e-22!63;CL:0000559!2.67e-22!63;CL:0000860!6.47e-20!45;CL:0000838!2.56e-18!52;CL:0000542!1.72e-17!53;CL:0000051!1.72e-17!53;CL:0000134!7.71e-15!358;CL:0002320!6.45e-14!365;CL:0000084!3.46e-13!25;CL:0000827!3.46e-13!25;CL:0000791!3.26e-12!18;CL:0000789!3.26e-12!18;CL:0002420!3.26e-12!18;CL:0002419!3.26e-12!18;CL:0000790!3.26e-12!18;CL:0000219!7.65e-10!390;CL:0000625!1.21e-07!11;CL:0002393!4.17e-07!9;CL:0002397!4.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.85e-22;33!CL:0002057;1.85e-22;33!CL:0000576;1.97e-21;48!CL:0000473;8.48e-21;39!CL:0000234;8.48e-21;39!CL:0000766;5.83e-20;69!CL:0000084;7.62e-19;25!CL:0002087;1.86e-17;104!CL:0000738;2.75e-17;136!CL:0000791;4.33e-17;18!CL:0000789;4.33e-17;18!CL:0002419;4.33e-17;18!CL:0000542;1.70e-13;53!CL:0000763;3.02e-13;100!CL:0000988;3.28e-12;177!CL:0000625;1.96e-10;11!CL:0000094;1.41e-08;8!CL:0000219;2.69e-08;193!CL:0000451;2.83e-08;10!CL:0000624;8.26e-08;6!CL:0002393;6.58e-07;6!CL:0002397;6.58e-07;6!CL:0000081;7.21e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.58e-83,136;CL:0000037,4.62e-81,168;CL:0000988,7.78e-81,177;CL:0002032,1.99e-74,161;CL:0000837,1.99e-74,161;CL:0002031,1.23e-67,120;CL:0002087,2.34e-65,115;CL:0000766,3.05e-48,72;CL:0000763,2.76e-46,108;CL:0000049,2.76e-46,108;CL:0000557,4.30e-42,67;CL:0000839,5.29e-40,66;CL:0002009,1.03e-37,61;CL:0002194,5.41e-37,59;CL:0000576,5.41e-37,59;CL:0000040,5.41e-37,59;CL:0000559,5.41e-37,59;CL:0000473,4.61e-35,48;CL:0000234,4.61e-35,48;CL:0000860,6.11e-33,42;CL:0002057,6.11e-33,42;CL:0000838,1.61e-24,52;CL:0000542,9.71e-24,53;CL:0000051,9.71e-24,53;CL:0000134,3.08e-22,354;CL:0002320,6.73e-21,361;CL:0000084,6.54e-19,25;CL:0000827,6.54e-19,25;CL:0000791,5.10e-17,18;CL:0000789,5.10e-17,18;CL:0002420,5.10e-17,18;CL:0002419,5.10e-17,18;CL:0000790,5.10e-17,18;CL:0000219,1.09e-16,386;CL:0000048,5.43e-12,427;CL:0000034,9.12e-12,441;CL:0000723,2.96e-11,433;CL:0000625,2.15e-10,11;CL:0002393,1.29e-09,9;CL:0002397,1.29e-09,9;CL:0000094,1.29e-08,8;CL:0000451,1.83e-08,10;CL:0000624,8.44e-08,6;CL:0000081,6.70e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-23;42!CL:0000790;4.33e-17;18!CL:0000051;1.70e-13;53!CL:0000049;7.99e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.68e-32!102;UBERON:0003061!1.68e-32!102;UBERON:0002193!3.23e-27!112;UBERON:0002371!1.63e-21!80;UBERON:0001474!1.61e-18!86;UBERON:0002405!2.87e-17!115;UBERON:0004765!3.37e-13!101;UBERON:0001434!3.37e-13!101;UBERON:0002384!2.19e-12!375;UBERON:0000178!1.30e-09!15;UBERON:0000179!1.30e-09!15;UBERON:0000463!1.30e-09!15;UBERON:0003081!4.10e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.62e-13;15!UBERON:0000179;2.62e-13;15!UBERON:0000463;2.62e-13;15!UBERON:0002390;5.08e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.73e-53,98;UBERON:0003061,1.73e-53,98;UBERON:0002193,8.62e-47,108;UBERON:0002371,8.86e-37,76;UBERON:0002405,7.90e-35,93;UBERON:0001474,2.07e-33,82;UBERON:0004765,2.82e-28,90;UBERON:0001434,4.26e-23,100;UBERON:0002384,4.31e-19,371;UBERON:0003081,5.23e-16,203;UBERON:0000178,3.04e-13,15;UBERON:0000179,3.04e-13,15;UBERON:0000463,3.04e-13,15;UBERON:0002204,1.92e-07,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0.737201809504527,2.09340350391728,0.655324116390517,0.527533956456907,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,2.67446920117829,4.35133124084712,2.99100968991981,14.5544782434094,5.75744097145819,17.9586703046648,0,0.90361775633475,0.739508020333575,0.154934401160603,0.568676929949686,1.17440175733939,20.4978301156795,28.0762226458198,17.1438587865523,1.56740831967947,1.6194683300949,1.54545340580512,10.3232749533491,12.8477820854195,8.49044214157357,8.13501629169896,5.75635043230556,6.50383378879718,7.48000220037591,8.19714260893122,7.09446689665756,11.3766074643084,14.846147722428,10.8341189275473,9.03563229804502,7.64137220161968,7.19115150224271,9.48860066349798,12.8371610830437,6.39337125799041,8.90598510504134,10.7710375115681,8.95071976118658,7.54544020434318,6.80862269629368,4.9825779919646,7.5374599577023,13.5585558789252,7.8187984093842,7.87019353423379,11.4166067156145,8.86094684834476,23.8718473532494,17.4335525971336,12.3698600849942,28.7561295735027,18.3215809266638,11.2507910687956,33.6315037614673,19.6927510427099,15.8917813775232,3.51992488922645,2.18455444504853,3.55803701545422,2.56038133539904,1.20118796110804,2.87376219977242,1.32208974556972,2.86216126360609,4.55370375287559,2.93618594685469,8.79228424688026,35.686258716337,19.6177997043538,5.00429761072646,33.4406609193516,47.9473130553981,26.3169918719372,28.0873312256339,46.2809618619698,27.4599727326145,27.2757419771076,28.6324874194896,34.4688911745559,23.9256606150311,21.6643091012012,19.9822458772053,20.6794362620206,11.5106533222573,12.712100818149,23.4740499445393,74.5881412705164,42.003910010085,47.0409857122396,23.1151059103035,43.3039157770171,30.9264700934367,21.7596935136772,12.1054857443157,11.7195021694155,5.70271226669025,12.0460095262218,13.1826209489051,11.2437653897111,10.6549763419808,9.03240796613151,37.700460983025,32.8951440813714,26.2132171027866,0,0,0,0,0,0,0,0,0.189069634328136,0,0.702678285545008,0.72038491523742,0.728590576585084,0,10.3855165969499,9.0547463395619,8.11043559165077,38.1584998888547,26.883760806666,44.9463576608774,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,64.572404543671,34.9002237733493,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0,0.168776332241266,0,0.504867548488229,0,0,0,0.10075209822764,0.169560592310488,0,0.818238361772504,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0.435758888184812,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0.4115740113314,0,5.07020139287323,0.982827216677626,0.590789906681404,10.5951143859516,0,0.171567810298526,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0.858486162094873,1.23108503043699,1.8720341211139,2.22946743433092,0,0.839910640994298,0.283550194484773,0.0895585227028483,0,0.383382679165211,2.46331618947972,13.9997010081029,15.9642648966394,10.0883967391873,11.4880614418006,0.444485260045183,0,1.17217447210047,0,0.102827492703324,0.600686115687835,0,0,0,0,0.387815147273333,3.57656445851882,0,0,0,0.257207374262142,0,0,0.714889968290738,7.05408087008876,1.64648067356154,0,1.06617584622764,0,0,0,0.299918973546171,2.43247561282381,1.00451418286425,6.32501818449095,0,0,0,0,0,0,4.25923547175404,27.7813371884717,28.4628398814563,21.433287058718,0,0,0,0,0,26.9642528620986,8.97484377612075,36.8829806958072,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.473107245101804,0.117141414992713,0,0,1.03473071292505,0,0.553107505625109,0.260650843404249,0.195801157462741,0,16.541442089831,28.4742745080574,20.171508424851,0.303127571446259,0,0.907170879989041,0,0.306923946576125,0,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0.355123450626254,0.0821271560138091,1.03850885836724,0.348631135379878,0,0.40101294060657,0.276242966807689,0.459257792658427,0.182091168006717,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,1.35473218771926,1.50506932156456,1.78413391131527,0,1.56712328305525,0.219259876645935,1.0457418040996,0,0,0,0.721287081534056,0,0,1.14853107599234,0,1.6068392984416,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0.382838137483752,0.910420027699949,0,0.62962469366128,0,0,1.06461206063404,0,0,0.143124886741991,0,0,0.571890581771475,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0.975267478179181,0,0,0.545999645631943,1.1312434556297,0,0,0,0.438450885253763,0.578775534266688,0,0,2.478587984798,0.281695602532241,0.143411352204052,0.294747123039363,0,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,0.470719003883896,0.86101074534246,0,0.443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| |||
|short_description=p3@TRABD | |||
}} |
Revision as of 16:46, 21 January 2014
Short description: | p3@TRABD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRABD_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 6bp_to_ENST00000395827, uc003bju.1_5end |
EntrezGene: | TRABD |
HGNC: | 28805 |
UniProt: | Q9H4I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.73e-53 | 98 |
blood island | 1.73e-53 | 98 |
hemolymphoid system | 8.62e-47 | 108 |
bone marrow | 8.86e-37 | 76 |
immune system | 7.90e-35 | 93 |
bone element | 2.07e-33 | 82 |
skeletal element | 2.82e-28 | 90 |
skeletal system | 4.26e-23 | 100 |
connective tissue | 4.31e-19 | 371 |
lateral plate mesoderm | 5.23e-16 | 203 |
blood | 3.04e-13 | 15 |
haemolymphatic fluid | 3.04e-13 | 15 |
organism substance | 3.04e-13 | 15 |
musculoskeletal system | 1.92e-07 | 167 |