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FFCP PHASE1:Hg19::chr3:140961094..140961103,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C39|description=CAGE_peak_at_chr3:140961094..140961103,+|id=chr3:140961094..140961103,+|ontology_enrichment_celltype=CL:0002623!6.97e-20!3;CL:0000622!3.84e-12!5;CL:0000154!3.39e-10!6;CL:0000150!6.17e-07!9|ontology_enrichment_celltype_v019=CL:0002623;3.96e-66;3!CL:0000622;3.00e-40;5!CL:0000154;9.08e-34;6!CL:0000150;6.07e-23;9!CL:0002251;5.85e-11;20!CL:0000151;1.19e-07;36|ontology_enrichment_celltype_v019_2=CL:0002623,3.35e-66,3;CL:0000622,2.71e-40,5;CL:0000154,8.35e-34,6;CL:0000150,5.74e-23,9;CL:0002251,5.70e-11,20|ontology_enrichment_development_v019=UBERON:0007297;4.32e-26;2|ontology_enrichment_disease=DOID:114!1.71e-13!2;DOID:178!1.51e-07!1;DOID:326!1.51e-07!1;DOID:3978!1.51e-07!1;DOID:3394!1.51e-07!1;DOID:5844!1.51e-07!1;DOID:1287!3.63e-07!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006947!6.54e-20!3;UBERON:0004054!6.54e-20!3;UBERON:0007023!4.28e-15!115;UBERON:0005904!4.52e-15!4;UBERON:0001876!2.49e-13!2;UBERON:0002619!4.06e-12!22;UBERON:0000349!1.67e-11!5;UBERON:0000956!1.28e-10!25;UBERON:0000203!1.28e-10!25;UBERON:0001049!1.80e-10!57;UBERON:0005068!1.80e-10!57;UBERON:0006241!1.80e-10!57;UBERON:0007135!1.80e-10!57;UBERON:0001044!3.39e-10!6;UBERON:0003293!3.39e-10!6;UBERON:0003294!3.39e-10!6;UBERON:0010047!3.39e-10!6;UBERON:0000167!3.39e-10!6;UBERON:0002616!4.68e-10!59;UBERON:0001950!5.58e-10!20;UBERON:0002020!6.66e-10!34;UBERON:0003528!6.66e-10!34;UBERON:0001017!1.39e-09!82;UBERON:0003135!2.39e-09!11;UBERON:0005743!4.91e-09!86;UBERON:0001896!1.18e-08!3;UBERON:0005290!1.18e-08!3;UBERON:0010096!1.18e-08!3;UBERON:0000955!3.40e-08!69;UBERON:0006238!3.40e-08!69;UBERON:0001869!3.47e-08!32;UBERON:0002780!4.17e-08!41;UBERON:0001890!4.17e-08!41;UBERON:0006240!4.17e-08!41;UBERON:0000073!5.72e-08!94;UBERON:0001016!5.72e-08!94;UBERON:0002791!6.41e-08!33;UBERON:0001301!6.59e-08!1;UBERON:0003080!6.84e-08!42;UBERON:0001000!8.00e-08!1;UBERON:0005352!8.00e-08!1;UBERON:0002702!9.10e-08!1;UBERON:0003075!1.14e-07!86;UBERON:0007284!1.14e-07!86;UBERON:0001893!1.14e-07!34;UBERON:0002146!1.18e-07!1;UBERON:0005623!1.18e-07!1;UBERON:0000998!1.33e-07!1;UBERON:0006868!1.33e-07!1;UBERON:0001871!1.76e-07!7;UBERON:0002346!3.08e-07!90;UBERON:0002298!4.53e-07!8;UBERON:0002022!4.90e-07!1;UBERON:0004111!7.57e-07!241;UBERON:0004121!9.17e-07!169;UBERON:0000033!9.97e-07!123|ontology_enrichment_uberon_v019=UBERON:0006947;2.83e-66;3!UBERON:0004054;2.83e-66;3!UBERON:0001301;1.46e-50;1!UBERON:0005904;4.53e-50;4!UBERON:0001000;5.12e-50;1!UBERON:0005352;5.12e-50;1!UBERON:0001044;9.08e-34;6!UBERON:0003293;9.08e-34;6!UBERON:0003294;9.08e-34;6!UBERON:0010047;9.08e-34;6!UBERON:0003408;9.08e-34;6!UBERON:0000167;9.08e-34;6!UBERON:0000058;8.12e-21;10!UBERON:0003135;4.91e-19;11!UBERON:0001041;3.53e-15;14!UBERON:0000161;1.77e-11;19!UBERON:0000166;1.77e-11;19!UBERON:0004175;1.65e-10;21!UBERON:0003101;4.43e-10;22!UBERON:0000079;4.43e-10;22!UBERON:0000165;3.99e-08;28!UBERON:0002365;1.19e-07;31!UBERON:0002330;1.19e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.35e-66,3;UBERON:0004054,3.35e-66,3;UBERON:0001301,1.46e-50,1;UBERON:0005904,5.14e-50,4;UBERON:0001000,6.58e-50,1;UBERON:0005352,6.58e-50,1;UBERON:0001044,8.35e-34,6;UBERON:0003293,8.35e-34,6;UBERON:0003294,8.35e-34,6;UBERON:0010047,8.35e-34,6;UBERON:0000167,8.35e-34,6;UBERON:0003408,8.54e-21,10;UBERON:0003135,5.14e-19,11;UBERON:0000058,1.72e-11,19;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0000166,4.53e-10,22;UBERON:0004175,5.49e-09,25;UBERON:0002553,3.25e-08,61;UBERON:0000165,6.91e-08,29;UBERON:0000930,6.91e-08,29;UBERON:0005103,1.49e-07,8;UBERON:0000083,1.49e-07,8;UBERON:0009201,1.49e-07,8;UBERON:0006553,1.49e-07,8;UBERON:0003074,1.49e-07,8;UBERON:0003060,1.49e-07,8;UBERON:0002365,1.92e-07,31;UBERON:0002330,1.92e-07,31;UBERON:0000080,7.48e-07,9;UBERON:0002120,7.48e-07,9;UBERON:0004875,7.48e-07,9;UBERON:0005721,7.48e-07,9;UBERON:0005754,7.48e-07,9;UBERON:0007297,7.48e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C39
|description=CAGE_peak_at_chr3:140961094..140961103,+
|id=chr3:140961094..140961103,+
|ontology_enrichment_celltype=CL:0002623!6.97e-20!3;CL:0000622!3.84e-12!5;CL:0000154!3.39e-10!6;CL:0000150!6.17e-07!9
|ontology_enrichment_celltype_v019=CL:0002623;3.96e-66;3!CL:0000622;3.00e-40;5!CL:0000154;9.08e-34;6!CL:0000150;6.07e-23;9!CL:0002251;5.85e-11;20!CL:0000151;1.19e-07;36
|ontology_enrichment_celltype_v019_2=CL:0002623,3.35e-66,3;CL:0000622,2.71e-40,5;CL:0000154,8.35e-34,6;CL:0000150,5.74e-23,9;CL:0002251,5.70e-11,20
|ontology_enrichment_development_v019=UBERON:0007297;4.32e-26;2
|ontology_enrichment_disease=DOID:114!1.71e-13!2;DOID:178!1.51e-07!1;DOID:326!1.51e-07!1;DOID:3978!1.51e-07!1;DOID:3394!1.51e-07!1;DOID:5844!1.51e-07!1;DOID:1287!3.63e-07!4
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|short_description=p@chr3:140961094..140961103,+
}}

Revision as of 21:40, 21 January 2014

Short description:p@chr3:140961094..140961103, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr3:140961094..140961103, +
Coexpression cluster:C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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