FFCP PHASE1:Hg19::chr3:185542761..185542813,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28867 | |||
|TSSclassifier=strong | |||
|UniProt=F8W930 | |||
|association_with_transcript=0bp_to_ENST00000346192,ENST00000457616_5end | |||
|description=CAGE_peak_1_at_IGF2BP2_5end | |||
|id=chr3:185542761..185542813,- | |||
|ontology_enrichment_celltype=CL:0002321!2.40e-24!248;CL:0000220!1.27e-23!246;CL:0000066!2.29e-22!254;CL:0000548!2.17e-15!679;CL:0000004!2.17e-15!679;CL:0000255!2.17e-15!679;CL:0000012!2.57e-15!682;CL:0000055!1.30e-12!180;CL:0000144!5.65e-12!625;CL:0000222!8.00e-11!119;CL:0000076!2.37e-09!62;CL:0002371!3.12e-09!591;CL:0000223!4.40e-09!59;CL:0002078!9.71e-09!44;CL:0000057!1.91e-08!75;CL:0000115!7.16e-08!35;CL:0002076!1.18e-07!43;CL:0002139!4.15e-07!24;CL:0000213!7.62e-07!57;CL:0000215!7.62e-07!57;CL:0000003!8.80e-07!722;CL:0000071!9.08e-07!18;CL:0002546!9.08e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.11e-07;24!CL:0000115;4.70e-07;36!CL:0000071;7.07e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.59e-25,250;CL:0000066,3.35e-22,253;CL:0000222,2.19e-11,121;CL:0000076,9.88e-10,63;CL:0002078,4.81e-09,45;CL:0000223,5.28e-09,58;CL:0000057,7.34e-09,76;CL:0000115,3.67e-08,36;CL:0002076,1.59e-07,42;CL:0002139,3.40e-07,24;CL:0000213,4.16e-07,58;CL:0000215,4.16e-07,58;CL:0000071,7.54e-07,18;CL:0002546,7.54e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;7.07e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.38e-14!659;UBERON:0005256!2.55e-12!143;UBERON:0002100!3.37e-12!216;UBERON:0000467!1.19e-11!625;UBERON:0003104!1.35e-11!238;UBERON:0009142!1.35e-11!238;UBERON:0000480!2.02e-11!626;UBERON:0000490!4.40e-11!138;UBERON:0003914!1.93e-10!118;UBERON:0000119!2.78e-10!312;UBERON:0004119!4.03e-10!169;UBERON:0000925!4.03e-10!169;UBERON:0006595!4.03e-10!169;UBERON:0000481!5.69e-10!347;UBERON:0000922!6.14e-10!612;UBERON:0000483!1.25e-09!309;UBERON:0000466!1.84e-09!126;UBERON:0000475!3.69e-09!365;UBERON:0003102!7.39e-09!95;UBERON:0001444!1.28e-08!48;UBERON:0002050!1.64e-08!605;UBERON:0005423!1.64e-08!605;UBERON:0002049!1.69e-08!79;UBERON:0007798!1.69e-08!79;UBERON:0000923!2.46e-08!604;UBERON:0005291!2.46e-08!604;UBERON:0006598!2.46e-08!604;UBERON:0002532!2.46e-08!604;UBERON:0005177!3.85e-08!107;UBERON:0001007!9.49e-08!155;UBERON:0001555!9.49e-08!155;UBERON:0007026!9.49e-08!155;UBERON:0000926!3.29e-07!448;UBERON:0004120!3.29e-07!448;UBERON:0006603!3.29e-07!448;UBERON:0001048!4.06e-07!168;UBERON:0000486!5.35e-07!82;UBERON:0001986!9.08e-07!18;UBERON:0004638!9.08e-07!18;UBERON:0004852!9.08e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;5.70e-07;33!UBERON:0004638;7.07e-07;18!UBERON:0001986;7.07e-07;18!UBERON:0004852;7.07e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.66e-13,148;UBERON:0003104,3.22e-11,160;UBERON:0009142,3.22e-11,160;UBERON:0002100,8.90e-11,199;UBERON:0003914,6.95e-10,117;UBERON:0000119,1.33e-09,309;UBERON:0003102,1.35e-09,99;UBERON:0005256,5.73e-09,122;UBERON:0000483,5.74e-09,306;UBERON:0002049,3.43e-08,78;UBERON:0007798,3.43e-08,78;UBERON:0005177,3.99e-08,101;UBERON:0001444,6.31e-08,49;UBERON:0004119,7.19e-08,160;UBERON:0000925,7.19e-08,160;UBERON:0006595,7.19e-08,160;UBERON:0000922,1.26e-07,592;UBERON:0000033,1.29e-07,56;UBERON:0000486,2.73e-07,83;UBERON:0004638,7.54e-07,18;UBERON:0001986,7.54e-07,18;UBERON:0004852,7.54e-07,18 | |||
|phase1_expression=5.26867299884614,5.99481466894753,5.49722175974288,1.0007329835313,5.36353313312745,2.61701557230111,0,5.68547886084148,8.61912573059467,8.60068777755281,9.07141518364156,14.8540133048517,12.6608149549658,6.43585035392242,8.61633176892581,3.36162573225888,1.80808358407193,1.46062018077475,5.36726078669558,4.92484232307152,9.79203317972414,6.89600387251793,10.304495536718,13.1399448069969,9.91786852798942,0,0,0,0,0,1.85779347979291,7.35536979583142,17.7711492079168,13.3111443660044,0,0,3.22960483268332,1.10799081706375,1.80490002723128,2.38711957787437,1.11957737119962,0.32389366601898,1.28787783817093,0.872389432677388,0,0.485168122375632,0.464858073811369,0,0.619412741790207,4.02769349251011,2.30544635876191,3.78371567821736,3.10271112662957,1.29096936716765,1.35426486594342,1.12945403725563,0.545812300115692,0.224723484445085,1.22433556948361,1.60464513538047,0.639337125799041,3.62836430205388,3.19141852194611,2.98357325372886,1.7412554317715,0.56738522469114,2.4912889959823,5.02497330513487,4.17186334736161,2.82345498116652,1.81619850790011,0.368277635987565,1.26584954976354,0.422510572623884,0.637812899895131,0.419317291016752,0.898629049171961,0.450530678524519,1.28580469357664,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,3.92355994087075,3.16060901730092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,9.75227465255847,5.36560687762909,14.0648818027883,3.61439152384566,6.51739283826656,5.35932120155048,3.9764297352555,6.32625331393427,13.0458047686414,11.9733874629785,15.1954179249108,1.44076983047484,15.3004021082868,11.8651021691017,2.59637914923747,1.91542711029194,2.79211717089617,1.19245312152671,0,0,14.5096557377695,20.645630282547,14.579901067519,6.78369530308812,13.423981958717,16.507082516404,15.465627523724,10.3366703667732,11.3845204059747,16.0665894127042,12.4877088303836,16.7259863258073,9.03029612928227,15.0741862941806,13.7724131139899,14.1986567971687,17.2887616922151,15.0899383847652,12.2653309972707,18.9853131913626,16.3049552098062,0,0,17.0076680335588,4.96971951695318,2.5326102332916,23.0391974615001,14.0549944166919,2.4826786753885,9.53151920241922,6.4049397437823,6.166688710429,20.8511393717843,20.0718901383835,12.4231046366229,21.1900398702904,15.55674996096,34.9138933432357,10.3012825354006,17.6846264678779,15.3932140968355,22.0776857450278,24.7665604883241,23.0339322991688,15.1074086728621,14.7401180774122,12.3990937410919,13.0680314301026,11.3742787468136,30.9454863058929,11.4978902690598,13.1302168884172,23.1469261763134,37.6807197058489,10.5354629011401,8.88814607817157,12.4697588892475,7.82682063804145,14.1717812194201,10.4643120521098,11.4443226626163,14.1042815159669,14.324301564143,13.912589162464,6.32797311527405,11.3080142601648,7.79496041289589,15.398460228891,7.54809168866855,14.5481451136931,10.2952781829818,6.85114267947954,7.96934783859292,9.85630351132814,16.9102594766317,16.9214711279512,17.5642136826617,14.3132149787204,17.1967035446887,16.5857688024593,13.1206842455327,5.83963774521328,14.0804579096834,5.14592750554308,6.90674606762403,13.4666699129274,12.271951188383,0.236613600079688,0.842923450390509,0.241011029883482,0.441175890929576,0.871517776369625,0,0,0.196221465125346,0.38474715694639,17.7157309109916,25.2435192846202,13.5819423739362,14.7008711385542,0,0,0.590789906681404,0,12.9137860470269,19.0440269431363,11.7432805387229,16.8602629886429,15.1798748341563,17.8695699155962,23.7840062876537,15.5990217791937,8.6598805215164,21.4471249203892,13.2671824486478,10.2500177910362,5.55582615091933,7.61016608938393,0,0,0.246217006087397,0.702012795417713,1.63494278517601,8.43604505880993,8.90305279453955,14.4610599187234,18.0908215859754,14.8223308642121,18.7857512790953,0,0,0.207328115540772,0,0.12624243342638,2.09543051164158,4.58386110669933,2.34434894420094,1.71072446022705,3.59896224461632,3.90445975197093,4.28739648945867,21.4170371099639,20.0541631663309,9.2406240134397,9.56610696607556,10.7296933755565,5.917119267892,7.1803291477915,5.2003718455683,10.5455023447478,11.3479305618623,11.4561536976923,16.442469270687,12.4802969240032,7.40916303102692,9.12061316022458,22.3896927707804,7.12756685640086,7.23454504943007,6.10073421020206,6.49824442683371,0,0.502257091432126,0,7.90762023122223,5.7430967917057,7.13184525203592,8.39731578671959,10.0683398049688,8.41586527227509,0.112085143993527,0,0,0.256686072559497,18.2948129440174,10.4111883086097,3.09315525111078,4.18790663335872,2.55175500661265,0,0,0.828831026872071,9.32455337065463,5.00170521059677,14.377046256086,6.44709670745502,7.85087550707512,5.20417969611984,6.2084949946138,15.0473049863859,4.5481500811197,11.3820378421755,7.3064815838898,6.26855173041791,14.4226800017018,14.0976833373173,15.7845974952994,0,0.431428401637234,0.106727557803444,10.9125925720653,4.99306318531491,9.37409909322009,4.46594054073798,11.9700339164689,4.2099014164961,3.71603532841533,3.07024349440022,3.86049410744658,5.93672265779964,7.09364591492216,4.79416658345443,4.68124789278712,5.19254429183621,6.04293967991788,16.0743067956858,7.81975234182811,9.02393691571784,7.34812468253483,6.91946438425525,9.04758463220026,18.9503837421113,13.554699330377,18.8243944602445,11.6911379722609,10.1329563737161,13.6480060885076,13.9476838326743,15.1141141271498,9.25363516141736,9.7540717515787,10.0337954770971,12.4889373792069,14.1282921517883,11.4176124908311,8.77039506583738,7.84306353074702,8.97575437907362,6.23227826829441,3.57916234130733,4.22468147755661,3.02179233900533,2.80532299729999,24.1191525958392,7.15066270640173,4.82051789532479,5.41356022435883,12.3238893691715,11.3592719297336,18.7457738578962,17.9391808930017,14.9367194731655,12.9544473672473,5.69805028139119,9.75181000629771,12.684544446097,42.6226459731911,9.81230474298834,5.57814659156743,12.9073062200562,6.2733354314454,10.7811753061631,9.04920251538937,6.08953094452551,8.89556251698816,8.87374297800346,9.30395923399168,12.0224181393116,13.5347437685916,9.98001386114202,17.1175595213568,8.27328444607436,7.06453776179307,13.130689403582,13.7268514868027,16.0224867190134,5.86329196562617,6.34041284692033,8.8464275810186,14.1413784335981,5.84912375115083,5.28250733783777,12.8309916723507,8.48432591722277,2.26016233240486,0.551365343546124,1.99031692572366,4.38450885253763,13.3118372881338,9.18252652865286,4.8698490471049,9.914351939192,11.2678241012897,18.0698303777105,21.4182909408604,8.56010523555001,5.32141596105897,5.06658324714394,2.96365403663912,15.93787329816,27.6448428993536,16.165314937886,11.3951386841084,14.1558280319719,3.20088922641049,18.0812256521917,18.5318623234388,17.2937759879304,29.8640420269047,5.07447609232169,9.94028369285088,5.12682468456746,1.66762242820452,0.411362273086194,3.24236655596359,3.7802200606668,4.75875105776562,8.97322197470774,13.474717973687,9.06648799129817,0,0,1.06712765022621,0.797131363644112,5.18906365725323,1.34053759092657,2.54008299268659,5.51857298466744,8.14311816529031,13.6940807419915,0,0,4.06300266723848,0,0,15.3304645568517,0,11.6751490437214,14.538947013007,14.1821770455122,0.586164286206121,2.50565556505718,13.5396138842484,0.540911356951966,8.65987116794332,0,3.36852972734796,2.19762268907841,17.3545546101804,0,4.54617834890261,19.0995587790152,19.0057395732889,17.8153207217555,0,0,14.136205537909,3.79048910721547,0.422250816255987,3.38721580026819,1.93398740871803,3.27512572210559,16.6697952478512,0,5.59871257791253,17.7040651760234,2.50629644545853,15.3471711068062,2.56472854656027,9.57932369387759,10.0023291130173,0.969332746095218,0,1.99613798001194,1.5625665665114,0,1.44999915086959,22.1897224156724,4.32231205497703,0.472775363535873,0,1.45802306691627,0.347249989866585,0,0.361789315876224,0,1.10579259931225,1.18219047581419,0.438770794307945,0.10893846351899,11.1538995422883,1.30815439456455,8.88748035606609,8.53086446235823,10.3221291071238,7.71396340646257,8.29403015302991,8.33538099956947,9.06159119231679,0,8.47693384533134,2.82559859230266,6.31667849728106,8.82281404429828,5.87375554415449,4.17458211993207,2.2251121057253,6.75193806489686,27.9128101952143,7.77441892886674,8.00637967045737,0.995261931078505,3.89213283814692,21.3860550726769,0.296521128680622,0.247127877893006,0.208843899010911,0.337005664903385,3.21031058919516,0,0,7.23959090048732,12.6245797357728,0,9.67925728389311,2.14250933141343,1.01098527405581,6.91487729306666,8.29505531177977,23.2628855447515,35.7471312345539,27.3121639014286,31.0628317409693,31.8762691553368,0.138674673013139,9.71934534676733,25.7720005199813,21.2424464056182,1.57254001417827,6.01951113650658,0.0967563312890851,0,0,0.678923115418936,38.0383906040366,5.42353777873278,21.7896660188334,10.9293036436644,0,4.49768180290047,16.8333522528221,2.77488893161158,10.1902900886886,16.4263075555681,9.73561067410283,0,1.00838358591705,13.9162839833284,1.64985824231757,4.62074300650288,4.39331954511799,7.64986632272413,5.49006120812886,0,0.136905378891993,7.66479528401834,8.59530882839914,0,1.95497680890578,0.229160424011684,4.30723814746088,14.1772090354284,1.28767814440971,0.669514372325618,10.6821721253895,11.8898961568993,40.7735823346088,16.7020346491314,16.4007558178521,17.120500138963,8.85847333632739,0.0846733320657845,0,0.953423842781029,7.39464482939088,5.36403802729212,5.81616473240859,0.449947783103001,0,0.121499113316049,3.35434687599266,2.44297692627514,17.7821053777644,21.8592696595171,1.25501137532991,31.8579227550279,1.42939065274673,0.662091970365432,2.28841683889275,4.3439968140297,3.45688596480507,6.85833456229759,22.7487363968726,0.164185041498678,4.25970054463554,5.43898039296603,0.439656701034247,14.5757577803443,0.387848869084652,0.39669780522807,0.684347351537318,13.3914854240168,5.9800951037909,14.7772046793686,1.24271716604159,0.496166021811951,0.197611631897944,4.14094834495046,19.7885789908756,2.72008901684737,0.7520696820681,2.45076461410769,1.96723578425883,11.6220031225173,0.886068179966986,0.122026264901963,0.250381861413,1.72022758707021,0.665574309221114,0.434674820589684,11.4829366997072,7.4988244777264,17.7429467523728,13.7023360101584,15.5275441000793,0,0,6.71646612990933,16.8273583090002,7.76728206103659,7.57612021100357,10.8174197753607,7.11848977277229,17.6206852665631,15.1230923763239,4.19680441573507,5.76635084959572,11.9472575372777,8.54625913110849,7.60788488693671,3.31764966272684,18.6089200190596,7.30443086536427,16.3780793806968,8.75851987988229,4.88244879845594,8.54688698252029,16.0041729993308,11.1368102370838,7.5638218852737,4.40030541129469,3.43395705182793,2.69399591012735,13.8803388051516,8.66789236832865,30.8795891579893,6.26386300716508,2.493765180635,4.39892701215285,9.7894681802587,5.55175407352611,15.1312709108876,2.41212454536578,5.47736352432231,14.8543809468604,7.4334673887352,3.33113974164331,1.72715170865599,10.0273785538536,0.276516872303462,0.194860308839388,0,0.490696182767533,6.22458712808184,1.72041036127604,27.4705760366215,0,12.909699292991,0,4.54012762853469,4.41854280604418,12.4492761870306,17.4181632809232,3.58104239650225,0,8.8068927439302,0,7.80769637788516,0,2.60265104943905,6.14509409770568,10.4941435715628,0.157723490002507,0,8.46422264857641,6.4311550244172,0.0642292250964595,1.41696576325585,0.319267718114302,0,3.52900374710405,0.0691572524642179,0,0,9.12773782059538,13.6844879083379,8.98800132756227,22.4119792331656,8.00902400481051,25.5433172642237,4.17724066444177,2.1058891937792,10.085253435176,3.90757005616546,14.4048681964782,17.3598232560703,24.2483981395954,0.0675375846183947,0,0.413373593002368,0,4.92277328116398,1.64477330057155,0.496211178389294,0,8.81560750713207,0,0.336283722218824,1.21393120847326,0.91064876540519,10.3781773090287,0.576169937778896,23.3223692834889,0.40781839786099,0.0657727735628491,4.25497827182286,14.1263880402928,1.41287567130925,0.157115589916002,27.7469441680651,32.8737139383418,6.26190014534002,8.5995303819669,3.64530375300947,12.9571161620836,19.528559461845,42.4214184418294,20.8444954829866,11.6041051931301,16.3889738010192,33.1804637670764,1.29068207646083,11.3598720701343,8.01006004736082,0.846774100381858,26.3472898825658,6.2041277132864,3.82215575590973,10.9618323161836,4.80936144714691,15.3616585477659,0,0.410651227424988,3.4794432940146,3.88568794447312,0,0,2.02164154321867,6.7767649223376,11.3238732247792,0,6.01958433241968,8.30526329915038,3.29222107453066,0.490296643507811,9.89841497826829,1.17785080268967,1.18818560130834,8.453114551668,10.8753353400203,0.939839179798536,7.41265711696138,0,14.9985308428752,22.5852717898043,2.88868920081006,15.3370641531769,1.83491713361816,0.716697915757256,13.4105827864207,0.203974470572744,4.36350690340377,3.7031878836078,3.71995018166751,1.38652688589425,4.75889218336168,25.9902835160263,32.4518748732176,11.5295635920408,18.4599781832987,47.2974807320042,63.8669551767172,19.8058956040976,0.909344378618873,0.803892390468535,1.65833887891756,0.20686599172379,0.639701945702943,11.6651571417233,0.193766729508018,1.61394257169231,9.53120831935214,1.97306190662311,10.105859447911,0.435433495793923,2.39563310759697,0.5388164241167,4.30333232356058,10.3124710529264,7.48910071220965,9.07182439960581,9.653614114347,4.94038611586228,11.7320471201727,2.2003459952916,12.6137815277879,6.65756774185513,0.603821380773079,0 | |||
|short_description=p1@IGF2BP2 | |||
}} |
Revision as of 23:04, 21 January 2014
Short description: | p1@IGF2BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGF2BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000346192, ENST00000457616_5end |
EntrezGene: | IGF2BP2 |
HGNC: | 28867 |
UniProt: | F8W930 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.59e-25 | 250 |
epithelial cell | 3.35e-22 | 253 |
mesodermal cell | 2.19e-11 | 121 |
squamous epithelial cell | 9.88e-10 | 63 |
meso-epithelial cell | 4.81e-09 | 45 |
endodermal cell | 5.28e-09 | 58 |
fibroblast | 7.34e-09 | 76 |
endothelial cell | 3.67e-08 | 36 |
endo-epithelial cell | 1.59e-07 | 42 |
endothelial cell of vascular tree | 3.40e-07 | 24 |
lining cell | 4.16e-07 | 58 |
barrier cell | 4.16e-07 | 58 |
blood vessel endothelial cell | 7.54e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.54e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 1.66e-13 | 148 |
mesenchyme | 3.22e-11 | 160 |
entire embryonic mesenchyme | 3.22e-11 | 160 |
trunk | 8.90e-11 | 199 |
epithelial tube | 6.95e-10 | 117 |
cell layer | 1.33e-09 | 309 |
surface structure | 1.35e-09 | 99 |
trunk mesenchyme | 5.73e-09 | 122 |
epithelium | 5.74e-09 | 306 |
vasculature | 3.43e-08 | 78 |
vascular system | 3.43e-08 | 78 |
trunk region element | 3.99e-08 | 101 |
subdivision of head | 6.31e-08 | 49 |
endoderm-derived structure | 7.19e-08 | 160 |
endoderm | 7.19e-08 | 160 |
presumptive endoderm | 7.19e-08 | 160 |
embryo | 1.26e-07 | 592 |
head | 1.29e-07 | 56 |
multilaminar epithelium | 2.73e-07 | 83 |
blood vessel endothelium | 7.54e-07 | 18 |
endothelium | 7.54e-07 | 18 |
cardiovascular system endothelium | 7.54e-07 | 18 |