FFCP PHASE1:Hg19::chr3:189586378..189586390,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2735 | |||
|description=CAGE_peak_at_chr3:189586378..189586390,+ | |||
|id=chr3:189586378..189586390,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.32e-25!43;CL:0000223!7.32e-22!59;CL:0002368!2.10e-14!13;CL:0002251!6.22e-14!21;CL:0000066!8.85e-10!254;CL:0000622!1.67e-09!5;CL:0002202!1.68e-08!9;CL:0002632!1.68e-08!9;CL:0002159!3.57e-08!13;CL:0000244!5.71e-08!4;CL:0000731!5.71e-08!4;CL:0000154!8.39e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.00e-29;42!CL:0002251;9.42e-29;20!CL:0000622;1.19e-16;5!CL:0002368;1.01e-14;13!CL:0002159;3.51e-14;14!CL:0000154;8.11e-14;6!CL:0000244;1.35e-13;4!CL:0000731;1.35e-13;4!CL:0002623;2.19e-10;3!CL:0002621;1.37e-09;3!CL:0000150;4.36e-09;9!CL:0002202;2.55e-08;9!CL:0002632;2.55e-08;9!CL:0000317;5.68e-08;2!CL:1000448;5.68e-08;2!CL:0002308;5.68e-08;2!CL:0002140;5.68e-08;2!CL:0002327;6.66e-08;4!CL:0000575;1.37e-07;2!CL:0000083;2.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.92e-38,42;CL:0000223,1.71e-33,58;CL:0002251,1.74e-28,20;CL:0000066,6.82e-23,253;CL:0000622,1.63e-16,5;CL:0002368,9.48e-15,13;CL:0002159,3.36e-14,14;CL:0000154,1.05e-13,6;CL:0000244,1.25e-13,4;CL:0000731,1.25e-13,4;CL:0000076,1.21e-12,63;CL:0002623,2.83e-10,3;CL:0002621,1.89e-09,3;CL:0002321,4.15e-09,250;CL:0000150,5.14e-09,9;CL:0002202,2.45e-08,9;CL:0002632,2.45e-08,9;CL:0000317,5.98e-08,2;CL:1000448,5.98e-08,2;CL:0002308,5.98e-08,2;CL:0002140,5.98e-08,2;CL:0002327,6.91e-08,4;CL:0002077,8.95e-08,34;CL:0000575,1.37e-07,2;CL:0000083,2.48e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;5.05e-18;58!UBERON:0008814;9.70e-08;2!UBERON:0010056;9.70e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!3.89e-14!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.88e-26;14!DOID:1793;2.68e-07;4!DOID:4074;5.33e-07;2!DOID:4905;5.33e-07;2!DOID:3498;5.33e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.39e-26,14;DOID:1793,2.48e-07,4;DOID:4074,4.94e-07,2;DOID:4905,4.94e-07,2;DOID:3498,4.94e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.27e-13!72;UBERON:0000166!2.85e-13!21;UBERON:0000161!9.83e-13!35;UBERON:0004119!3.13e-11!169;UBERON:0000925!3.13e-11!169;UBERON:0006595!3.13e-11!169;UBERON:0000165!1.28e-10!28;UBERON:0000930!1.28e-10!28;UBERON:0003729!5.77e-10!5;UBERON:0000974!6.55e-10!10;UBERON:0000365!3.58e-09!5;UBERON:0003343!3.21e-08!4;UBERON:0004785!3.21e-08!4;UBERON:0000065!4.32e-08!53;UBERON:0007196!4.47e-08!14;UBERON:0001558!4.47e-08!14;UBERON:0001444!5.73e-08!48;UBERON:0005910!1.56e-07!6;UBERON:0001007!4.75e-07!155;UBERON:0001555!4.75e-07!155;UBERON:0007026!4.75e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.35e-16;28!UBERON:0000161;4.09e-15;19!UBERON:0000166;4.09e-15;19!UBERON:0003729;5.67e-15;13!UBERON:0003343;4.02e-14;4!UBERON:0004785;4.02e-14;4!UBERON:0000974;7.90e-14;6!UBERON:0000486;4.42e-12;12!UBERON:0000365;7.01e-11;5!UBERON:0001723;2.61e-10;3!UBERON:0001033;2.61e-10;3!UBERON:0001949;1.37e-09;3!UBERON:0000344;3.10e-09;20!UBERON:0005910;4.56e-09;6!UBERON:0002419;5.68e-08;2!UBERON:0007771;5.68e-08;2!UBERON:0003297;5.68e-08;2!UBERON:0001821;5.68e-08;2!UBERON:0003487;5.68e-08;2!UBERON:0001820;5.68e-08;2!UBERON:0001911;6.66e-08;4!UBERON:0001041;9.65e-08;14!UBERON:0007811;1.37e-07;52!UBERON:0001555;1.98e-07;54!UBERON:0000033;6.53e-07;50!UBERON:0001444;8.05e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.78e-18,22;UBERON:0000165,8.12e-16,29;UBERON:0000930,8.12e-16,29;UBERON:0003729,7.14e-15,13;UBERON:0000161,2.62e-14,36;UBERON:0003343,4.24e-14,4;UBERON:0004785,4.24e-14,4;UBERON:0003102,6.67e-13,99;UBERON:0000033,1.94e-12,56;UBERON:0000153,2.71e-12,62;UBERON:0007811,2.71e-12,62;UBERON:0001004,3.19e-12,74;UBERON:0004119,2.40e-11,160;UBERON:0000925,2.40e-11,160;UBERON:0006595,2.40e-11,160;UBERON:0001444,3.21e-11,49;UBERON:0000365,6.58e-11,5;UBERON:0001723,2.57e-10,3;UBERON:0001033,2.57e-10,3;UBERON:0010056,2.57e-10,3;UBERON:0001949,1.89e-09,3;UBERON:0000344,3.57e-09,20;UBERON:0005910,4.34e-09,6;UBERON:0000974,3.40e-08,10;UBERON:0002419,5.98e-08,2;UBERON:0007771,5.98e-08,2;UBERON:0003297,5.98e-08,2;UBERON:0001821,5.98e-08,2;UBERON:0003487,5.98e-08,2;UBERON:0001820,5.98e-08,2;UBERON:0005089,5.98e-08,2;UBERON:0005088,5.98e-08,2;UBERON:0001911,6.91e-08,4;UBERON:0005333,6.91e-08,4;UBERON:0008425,6.91e-08,4;UBERON:0005311,6.91e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.903106483949403,0.550975469195755,0,0,0,0.919421224478927,1.50602959389125,2.58827807116751,0.154934401160603,1.56386155736164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27865759463288,5.93255108455087,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,2.18196896472668,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47526683910891,0,8.04231779293047,11.4809671996577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69560682037491,3.40260233381728,4.29880908973672,7.55648240136301,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21570057940183,8.83977493784605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,4.01985876597321,17.5516266429861,0,0,0,0,0,0,0,0,0,7.60310610660499,8.26417289669956,0.638063562472921,8.29493803015509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11688647996127,0.670302275535787,3.26672954583968,0,2.15252686335615,3.36942951335251,7.98174276366016,6.66197860600182,0,0,0,0,0,0,0,0,0,0,3.43056302373444,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,6.03105275913148,1.77977555204936,0.236387681767936,0,1.74962768029953,0,0,0,0,0,0,0,0,9.20196712238782,0.846452843541768,0,0.23056390438806,0.269272933229316,0,0.31900115973192,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.522109747527277,0,0,0.234264445725339,3.46664099509765,2.15231080825299,1.69946265673865,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.832048038078832,0,3.5277263069176,1.13176968554523,0.34945333648406,0,0,0.0730893170861856,0,1.55182426381471,0,0.90392296312213,0,0,0,0,0,0,4.19600180122473,0,0.458146384663663,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36695500158826,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,5.10673006216145,0,0,0,0,0,0,0,0,0,0,0,0,1.62474530350739,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,1.59989916683944,0,0.172214979660816,0,0,2.23807212351111,2.48830904013189,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,7.2629311690759,2.47736419030255,31.5497189457288,7.04706563517063,0,0,0,0,0,0,1.57144016688853,0,0,0,0,0,0,0,0,0.496211178389294,0,1.02209942111676,0,0,0,0,0.0887023701626388,0,0.857440047187092,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,6.00926876072807,5.29227278991245,1.38251932362818,0,0.236664001461131,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,4.99951028095841,3.17605384544123,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,1.91910583710883,0.476128862927481,0.193766729508018,0.558672428662721,0,0,0,3.26575121845442,1.71116650542641,0.606168477131288,0.645499848534087,0.665320713092027,0.732629417498771,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr3:189586378..189586390,+ | |||
}} |
Revision as of 23:17, 21 January 2014
Short description: | p@chr3:189586378..189586390, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr3:189586378..189586390, + |
Coexpression cluster: | C2735_oral_Sebocyte_Keratinocyte_Small_cervical_Prostate_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.92e-38 | 42 |
endodermal cell | 1.71e-33 | 58 |
epithelial cell of alimentary canal | 1.74e-28 | 20 |
epithelial cell | 6.82e-23 | 253 |
acinar cell | 1.63e-16 | 5 |
respiratory epithelial cell | 9.48e-15 | 13 |
general ecto-epithelial cell | 3.36e-14 | 14 |
protein secreting cell | 1.05e-13 | 6 |
transitional epithelial cell | 1.25e-13 | 4 |
urothelial cell | 1.25e-13 | 4 |
squamous epithelial cell | 1.21e-12 | 63 |
acinar cell of salivary gland | 2.83e-10 | 3 |
gingival epithelial cell | 1.89e-09 | 3 |
embryonic cell | 4.15e-09 | 250 |
glandular epithelial cell | 5.14e-09 | 9 |
epithelial cell of tracheobronchial tree | 2.45e-08 | 9 |
epithelial cell of lower respiratory tract | 2.45e-08 | 9 |
sebum secreting cell | 5.98e-08 | 2 |
epithelial cell of sweat gland | 5.98e-08 | 2 |
epithelial cell of skin gland | 5.98e-08 | 2 |
acinar cell of sebaceous gland | 5.98e-08 | 2 |
mammary gland epithelial cell | 6.91e-08 | 4 |
ecto-epithelial cell | 8.95e-08 | 34 |
corneal epithelial cell | 1.37e-07 | 2 |
epithelial cell of pancreas | 2.48e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.78e-18 | 22 |
mouth | 8.12e-16 | 29 |
stomodeum | 8.12e-16 | 29 |
mouth mucosa | 7.14e-15 | 13 |
orifice | 2.62e-14 | 36 |
mucosa of oral region | 4.24e-14 | 4 |
respiratory system mucosa | 4.24e-14 | 4 |
surface structure | 6.67e-13 | 99 |
head | 1.94e-12 | 56 |
anterior region of body | 2.71e-12 | 62 |
craniocervical region | 2.71e-12 | 62 |
respiratory system | 3.19e-12 | 74 |
endoderm-derived structure | 2.40e-11 | 160 |
endoderm | 2.40e-11 | 160 |
presumptive endoderm | 2.40e-11 | 160 |
subdivision of head | 3.21e-11 | 49 |
urothelium | 6.58e-11 | 5 |
tongue | 2.57e-10 | 3 |
gustatory system | 2.57e-10 | 3 |
future tongue | 2.57e-10 | 3 |
gingival epithelium | 1.89e-09 | 3 |
mucosa | 3.57e-09 | 20 |
transitional epithelium | 4.34e-09 | 6 |
neck | 3.40e-08 | 10 |
skin gland | 5.98e-08 | 2 |
epidermis gland | 5.98e-08 | 2 |
gland of integumental system | 5.98e-08 | 2 |
sebaceous gland | 5.98e-08 | 2 |
skin sebaceous gland | 5.98e-08 | 2 |
sweat gland | 5.98e-08 | 2 |
sweat gland placode | 5.98e-08 | 2 |
sebaceous gland placode | 5.98e-08 | 2 |
mammary gland | 6.91e-08 | 4 |
mammary bud | 6.91e-08 | 4 |
mammary ridge | 6.91e-08 | 4 |
mammary placode | 6.91e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.39e-26 | 14 |
pancreatic cancer | 2.48e-07 | 4 |
pancreas adenocarcinoma | 4.94e-07 | 2 |
pancreatic carcinoma | 4.94e-07 | 2 |
pancreatic ductal adenocarcinoma | 4.94e-07 | 2 |