FFCP PHASE1:Hg19::chr4:90332316..90332323,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:90332316..90332323,+ | |||
|id=chr4:90332316..90332323,+ | |||
|ontology_enrichment_celltype=CL:0002594!2.65e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.77e-12;55!CL:0002568;2.93e-12;1!CL:0002594;3.59e-11;4!CL:0000048;9.54e-11;58!CL:0000034;7.08e-10;69!CL:0000077;3.00e-09;19!CL:0000723;3.11e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,2.93e-12,1;CL:0002594,3.78e-11,4;CL:0000077,3.03e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.55e-27!14;DOID:193!4.87e-17!29;DOID:120!1.70e-15!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.39e-73;14!DOID:120;2.12e-37;27!DOID:193;9.77e-35;29!DOID:3571;1.25e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.52e-73,14;DOID:120,2.16e-37,27;DOID:193,9.95e-35,29;DOID:3571,1.19e-11,1;DOID:0050686,3.45e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0002118!4.53e-13!5;UBERON:0004532!4.53e-13!5;UBERON:0000992!1.53e-10!13;UBERON:0001310!2.65e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.23e-33;5!UBERON:0000992;1.24e-28;13!UBERON:0000991;1.29e-17;21!UBERON:0002119;1.47e-11;4!UBERON:0001310;3.59e-11;4!UBERON:0003134;8.45e-11;33!UBERON:0004458;1.28e-07;48!UBERON:0003100;2.26e-07;41!UBERON:0000474;4.38e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.18e-33,5;UBERON:0000992,1.21e-28,13;UBERON:0000991,1.27e-17,21;UBERON:0009196,1.27e-17,21;UBERON:0009117,1.27e-17,21;UBERON:0005564,1.27e-17,21;UBERON:0004176,8.30e-17,22;UBERON:0002119,1.47e-11,4;UBERON:0001310,3.78e-11,4;UBERON:0002323,1.67e-10,46;UBERON:0003134,7.66e-10,37;UBERON:0000474,7.66e-10,37;UBERON:0004458,8.06e-10,49;UBERON:0003886,7.56e-09,54;UBERON:0003100,7.67e-09,41;UBERON:0002553,9.40e-08,61;UBERON:0003133,1.72e-07,48 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0.709336764396714,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,35.4204501176311,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44030255766841,11.3299349618038,34.3907089666276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.384417447767103,0,2.89537058058494,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,2.84074527747786,0,0.563391205064483,0,0,1.07001315444375,0,0.422215270595328,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,10.6728833999681,0,10.5578810675856,0,11.9628771551098,2.60872530905867,7.66313805885814,13.3281824259078,36.2114952552149,0,6.98168620776175,1.85613503951397,3.58286299828754,0,0,0,0,0,28.3062900614902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:90332316..90332323,+ | |||
}} |
Revision as of 02:15, 22 January 2014
Short description: | p@chr4:90332316..90332323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:90332316..90332323, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 2.93e-12 | 1 |
smooth muscle cell of the umbilical artery | 3.78e-11 | 4 |
mesothelial cell | 3.03e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.18e-33 | 5 |
female gonad | 1.21e-28 | 13 |
gonad | 1.27e-17 | 21 |
indifferent external genitalia | 1.27e-17 | 21 |
indifferent gonad | 1.27e-17 | 21 |
gonad primordium | 1.27e-17 | 21 |
external genitalia | 8.30e-17 | 22 |
left ovary | 1.47e-11 | 4 |
umbilical artery | 3.78e-11 | 4 |
body cavity | 1.67e-10 | 46 |
female reproductive organ | 7.66e-10 | 37 |
female reproductive system | 7.66e-10 | 37 |
body cavity or lining | 8.06e-10 | 49 |
body cavity precursor | 7.56e-09 | 54 |
female organism | 7.67e-09 | 41 |
anatomical cavity | 9.40e-08 | 61 |
reproductive organ | 1.72e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.52e-73 | 14 |
female reproductive organ cancer | 2.16e-37 | 27 |
reproductive organ cancer | 9.95e-35 | 29 |
liver cancer | 1.19e-11 | 1 |
organ system cancer | 3.45e-09 | 137 |