FFCP PHASE1:Hg19::chr4:144312629..144312638,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2549 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4066 | |||
|TSSclassifier=strong | |||
|UniProt=D6RIF8 | |||
|association_with_transcript=-24bp_to_ENST00000509992_5end | |||
|coexpression_cluster_id=C282 | |||
|description=CAGE_peak_30_at_GAB1_5end | |||
|id=chr4:144312629..144312638,+ | |||
|ontology_enrichment_celltype=CL:0000817!2.10e-23!3;CL:0000819!3.16e-18!1;CL:0000945!2.02e-11!24;CL:0000826!2.02e-11!24;CL:0000785!8.69e-10!2;CL:0000955!8.69e-10!2;CL:0000818!8.69e-10!2;CL:0000954!8.69e-10!2;CL:0000816!8.69e-10!2;CL:0000542!6.42e-08!53;CL:0000051!6.42e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.39e-66;1!CL:0000819;2.39e-66;1!CL:0000817;4.66e-66;1!CL:0000236;2.66e-21;13!CL:0000945;4.20e-12;24!CL:0000542;4.69e-09;53!CL:0002087;8.53e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.52e-87,3;CL:0000819,2.39e-66,1;CL:0000785,5.04e-34,2;CL:0000955,5.04e-34,2;CL:0000818,5.04e-34,2;CL:0000954,5.04e-34,2;CL:0000816,5.04e-34,2;CL:0000236,7.13e-20,14;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24 | |||
|ontology_enrichment_development_v019=CL:0000954;5.04e-34;2!CL:0000051;4.69e-09;53 | |||
|ontology_enrichment_disease=DOID:12603!2.66e-18!1;DOID:0060073!3.16e-18!1;DOID:8675!3.16e-18!1;DOID:0060058!1.50e-15!10;DOID:4929!1.44e-09!2;DOID:2531!3.14e-08!51;DOID:0060083!3.14e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.23e-66;1!DOID:0060073;2.39e-66;1!DOID:8675;2.39e-66;1!DOID:2531;2.07e-08;51!DOID:0060083;2.07e-08;51!DOID:1240;5.62e-08;39!DOID:0060058;6.13e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.23e-66,1;DOID:0060073,2.39e-66,1;DOID:8675,2.39e-66,1;DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51;DOID:0060058,6.13e-08,10;DOID:1240,6.83e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004913!8.72e-18!1;UBERON:0003703!8.72e-18!1;UBERON:0001174!8.72e-18!1;UBERON:0004914!8.72e-18!1;UBERON:0000997!1.03e-17!1;UBERON:0005056!1.03e-17!1;UBERON:0000341!1.22e-09!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64507937814297,1.298422916788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55436704901932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867479195013787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p30@GAB1 | |||
}} |
Revision as of 03:18, 22 January 2014
Short description: | p30@GAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_GAB1_5end |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | -24bp_to_ENST00000509992_5end |
EntrezGene: | GAB1 |
HGNC: | 4066 |
UniProt: | D6RIF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.52e-87 | 3 |
B-1 B cell | 2.39e-66 | 1 |
mature B cell | 5.04e-34 | 2 |
pre-B-II cell | 5.04e-34 | 2 |
transitional stage B cell | 5.04e-34 | 2 |
small pre-B-II cell | 5.04e-34 | 2 |
immature B cell | 5.04e-34 | 2 |
B cell | 7.13e-20 | 14 |
lymphocyte | 2.91e-12 | 53 |
common lymphoid progenitor | 2.91e-12 | 53 |
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.23e-66 | 1 |
lymphatic system cancer | 2.39e-66 | 1 |
lymphosarcoma | 2.39e-66 | 1 |
hematologic cancer | 1.06e-12 | 51 |
immune system cancer | 1.06e-12 | 51 |
lymphoma | 6.13e-08 | 10 |
leukemia | 6.83e-08 | 39 |