FFCP PHASE1:Hg19::chr4:187647683..187647690,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2195 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3595 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=159bp_to_uc010iso.1_5end | |||
|description=CAGE_peak_16_at_FAT1_5end | |||
|id=chr4:187647683..187647690,- | |||
|ontology_enrichment_celltype=CL:0002076!1.29e-08!43;CL:0000223!1.26e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.38e-31;3!CL:0002159;1.36e-26;14!CL:0000317;3.00e-22;2!CL:1000448;3.00e-22;2!CL:0002308;3.00e-22;2!CL:0002140;3.00e-22;2!CL:0002621;4.93e-15;3!CL:0000362;2.88e-11;9!CL:0002077;1.56e-09;34!CL:0000622;1.80e-09;5!CL:0000154;4.90e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,5.65e-32,3;CL:0002159,7.13e-27,14;CL:0000317,1.66e-22,2;CL:1000448,1.66e-22,2;CL:0002308,1.66e-22,2;CL:0002140,1.66e-22,2;CL:0002621,4.28e-15,3;CL:0000362,2.34e-11,9;CL:0002077,7.32e-11,34;CL:0000622,1.42e-09,5;CL:0000154,4.04e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.01e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;4.29e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,5.05e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!8.11e-08!95;UBERON:0000475!4.27e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;7.09e-24;4!UBERON:0008895;7.09e-24;4!UBERON:0002419;3.00e-22;2!UBERON:0007771;3.00e-22;2!UBERON:0003297;3.00e-22;2!UBERON:0001821;3.00e-22;2!UBERON:0003487;3.00e-22;2!UBERON:0001820;3.00e-22;2!UBERON:0011159;3.07e-19;5!UBERON:0001949;4.93e-15;3!UBERON:0001831;1.01e-11;1!UBERON:0001567;1.01e-11;1!UBERON:0011137;4.60e-09;11!UBERON:0010323;4.60e-09;11!UBERON:0010371;1.80e-08;31!UBERON:0001003;5.87e-07;15!UBERON:0007376;5.87e-07;15!UBERON:0003929;6.02e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.63e-24,4;UBERON:0008895,3.63e-24,4;UBERON:0002419,1.66e-22,2;UBERON:0007771,1.66e-22,2;UBERON:0003297,1.66e-22,2;UBERON:0001821,1.66e-22,2;UBERON:0003487,1.66e-22,2;UBERON:0001820,1.66e-22,2;UBERON:0005089,1.66e-22,2;UBERON:0005088,1.66e-22,2;UBERON:0011159,1.80e-19,5;UBERON:0010188,2.47e-16,6;UBERON:0002539,2.47e-16,6;UBERON:0008816,2.47e-16,6;UBERON:0001949,4.28e-15,3;UBERON:0001831,1.63e-11,1;UBERON:0001567,1.63e-11,1;UBERON:0008801,1.63e-11,1;UBERON:0003102,2.42e-11,99;UBERON:0010323,3.63e-09,11;UBERON:0011137,2.62e-07,14;UBERON:0001003,5.19e-07,15;UBERON:0007376,5.19e-07,15;UBERON:0007383,5.19e-07,15 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0.640672166455702,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,0,0,0,0.355009592516614,0.403008392910561,0,0.57978255948989,1.63647672354501,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,2.63400684980701,0,0.402115889646523,0.185176890317059,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,1.87467667973554,1.51183915378974,1.70130116690864,0.716468181622786,0.290633938513962,0,3.94130590316755,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,1.38115775959256,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0,0,3.80962293576241,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0.247528499761764,5.74265537996172,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0,0,0.991709492165869,0.768760269460425,2.67986696238627,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0.384888450902048,0,0,0.0941438007767792,0.43050537267123,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,2.17727711363265,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,1.4793148277115,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.975966209950223,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0.881931576729399,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.157611414598396,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0.342173675768659,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0.624902039810533,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.128458450192919,0,0.319267718114302,0,0,0,0,0,0.687034029507179,0,0,0,0.381382095467167,0,0.596748666348824,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,1.09651553371436,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0,0,0,0.62164849248911,0.6828739083758,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0.71421575442263,0.352894871715692,0,0,0.917458566809082,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p16@FAT1 | |||
}} |
Revision as of 04:23, 22 January 2014
Short description: | p16@FAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_FAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_uc010iso.1_5end |
EntrezGene: | FAT1 |
HGNC: | 3595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 5.65e-32 | 3 |
general ecto-epithelial cell | 7.13e-27 | 14 |
sebum secreting cell | 1.66e-22 | 2 |
epithelial cell of sweat gland | 1.66e-22 | 2 |
epithelial cell of skin gland | 1.66e-22 | 2 |
acinar cell of sebaceous gland | 1.66e-22 | 2 |
gingival epithelial cell | 4.28e-15 | 3 |
epidermal cell | 2.34e-11 | 9 |
ecto-epithelial cell | 7.32e-11 | 34 |
acinar cell | 1.42e-09 | 5 |
protein secreting cell | 4.04e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.63e-24 | 4 |
splanchnocranium | 3.63e-24 | 4 |
skin gland | 1.66e-22 | 2 |
epidermis gland | 1.66e-22 | 2 |
gland of integumental system | 1.66e-22 | 2 |
sebaceous gland | 1.66e-22 | 2 |
skin sebaceous gland | 1.66e-22 | 2 |
sweat gland | 1.66e-22 | 2 |
sweat gland placode | 1.66e-22 | 2 |
sebaceous gland placode | 1.66e-22 | 2 |
primary subdivision of cranial skeletal system | 1.80e-19 | 5 |
protuberance | 2.47e-16 | 6 |
pharyngeal arch | 2.47e-16 | 6 |
embryonic head | 2.47e-16 | 6 |
gingival epithelium | 4.28e-15 | 3 |
parotid gland | 1.63e-11 | 1 |
cheek | 1.63e-11 | 1 |
parotid gland primordium | 1.63e-11 | 1 |
surface structure | 2.42e-11 | 99 |
cranial skeletal system | 3.63e-09 | 11 |
axial skeletal system | 2.62e-07 | 14 |
skin epidermis | 5.19e-07 | 15 |
outer epithelium | 5.19e-07 | 15 |
enveloping layer of ectoderm | 5.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.05e-12 | 1 |