FFCP PHASE1:Hg19::chr5:59792105..59792117,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_at_chr5:59792105..59792117,- | |||
|id=chr5:59792105..59792117,- | |||
|ontology_enrichment_celltype=CL:1000306!6.06e-07!4;CL:0002547!6.06e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.12e-27;6!CL:0000222;4.28e-19;1!CL:0000153;1.04e-18;9!CL:0000447;1.04e-18;9!CL:0002569;4.80e-13;6!CL:0000327;1.70e-11;15!CL:0000081;1.56e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.23e-27,6;CL:0000138,1.23e-27,6;CL:0000153,1.10e-18,9;CL:0000447,1.10e-18,9;CL:0002569,4.81e-13,6;CL:0000327,1.76e-11,15;CL:0000081,1.56e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0004874;4.28e-19;1!UBERON:0006965;1.43e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.05e-23!115;UBERON:0001893!1.04e-12!34;UBERON:0001869!8.91e-12!32;UBERON:0002791!3.05e-11!33;UBERON:0002780!4.68e-10!41;UBERON:0001890!4.68e-10!41;UBERON:0006240!4.68e-10!41;UBERON:0003080!9.49e-10!42;UBERON:0001950!1.41e-09!20;UBERON:0000956!3.18e-09!25;UBERON:0000203!3.18e-09!25;UBERON:0002020!3.19e-09!34;UBERON:0003528!3.19e-09!34;UBERON:0002619!1.34e-08!22;UBERON:0000200!1.09e-07!6;UBERON:0001049!1.46e-07!57;UBERON:0005068!1.46e-07!57;UBERON:0006241!1.46e-07!57;UBERON:0007135!1.46e-07!57;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0002616!3.34e-07!59;UBERON:0000415!6.06e-07!4;UBERON:0007240!6.06e-07!4;UBERON:0005742!6.06e-07!4;UBERON:0005734!6.06e-07!4;UBERON:0004664!6.06e-07!4;UBERON:0004663!6.06e-07!4;UBERON:0003056!6.73e-07!61;UBERON:0002346!7.68e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;1.08e-19;1!UBERON:0005623;1.08e-19;1!UBERON:0000989;4.28e-19;1!UBERON:0008811;4.28e-19;1!UBERON:0003422;4.80e-13;6!UBERON:0003104;2.55e-11;7!UBERON:0009142;2.55e-11;7!UBERON:0002331;3.37e-08;10!UBERON:0003978;1.93e-07;3!UBERON:0000946;1.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.08e-19,1;UBERON:0005623,1.08e-19,1;UBERON:0000989,3.25e-19,1;UBERON:0008811,3.25e-19,1;UBERON:0006258,3.25e-19,1;UBERON:0005876,3.25e-19,1;UBERON:0004874,3.25e-19,1;UBERON:0003422,4.81e-13,6;UBERON:0002331,3.37e-08,10;UBERON:0000358,3.37e-08,10;UBERON:0000307,3.37e-08,10;UBERON:0000091,3.37e-08,10;UBERON:0000087,3.37e-08,10;UBERON:0007010,3.37e-08,10;UBERON:0007806,3.37e-08,10;UBERON:0008780,3.37e-08,10;UBERON:0005728,3.37e-08,10;UBERON:0003978,1.93e-07,3;UBERON:0009751,1.93e-07,3;UBERON:0000946,1.93e-07,3;UBERON:0002523,1.93e-07,3;UBERON:0005983,1.93e-07,3;UBERON:0002165,1.93e-07,3;UBERON:0002062,1.93e-07,3;UBERON:0007280,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0,3.1811437882044,4.37971383272372,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11512312139057,2.29723871668228,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,8.567663494796,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,6.18733144831546,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0.896436696664224,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.756215088665154,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.31037357147929,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr5:59792105..59792117,- | |||
}} |
Revision as of 05:35, 22 January 2014
Short description: | p@chr5:59792105..59792117, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:59792105..59792117, - |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.23e-27 | 6 |
chondrocyte | 1.23e-27 | 6 |
GAG secreting cell | 1.10e-18 | 9 |
carbohydrate secreting cell | 1.10e-18 | 9 |
mesenchymal stem cell of umbilical cord | 4.81e-13 | 6 |
extracellular matrix secreting cell | 1.76e-11 | 15 |
blood cell | 1.56e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.08e-19 | 1 |
semi-lunar valve | 1.08e-19 | 1 |
penis | 3.25e-19 | 1 |
intromittent organ | 3.25e-19 | 1 |
lateral plate mesenchyme | 3.25e-19 | 1 |
undifferentiated genital tubercle | 3.25e-19 | 1 |
somatopleure | 3.25e-19 | 1 |
mesenchyme of umbilical cord | 4.81e-13 | 6 |
umbilical cord | 3.37e-08 | 10 |
blastocyst | 3.37e-08 | 10 |
blastula | 3.37e-08 | 10 |
bilaminar disc | 3.37e-08 | 10 |
inner cell mass | 3.37e-08 | 10 |
cleaving embryo | 3.37e-08 | 10 |
connecting stalk | 3.37e-08 | 10 |
inner cell mass derived epiblast | 3.37e-08 | 10 |
extraembryonic mesoderm | 3.37e-08 | 10 |
valve | 1.93e-07 | 3 |
cardiac mesenchyme | 1.93e-07 | 3 |
cardial valve | 1.93e-07 | 3 |
tunica intima | 1.93e-07 | 3 |
heart layer | 1.93e-07 | 3 |
endocardium | 1.93e-07 | 3 |
endocardial cushion | 1.93e-07 | 3 |
presumptive endocardium | 1.93e-07 | 3 |