FFCP PHASE1:Hg19::chr5:176433693..176433812,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51720 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30298 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z2T8,D6RDZ5,D6RCF3,D6RCQ3,Q96RL1 | |||
|association_with_transcript=0bp_to_ENST00000323774,ENST00000377220,ENST00000507513,ENST00000510698,ENST00000511320,ENST00000512031,NM_001199297,NM_001199298,uc003mfc.1,uc003mfd.1,uc003mfg.1,uc003mfh.1,uc010jkj.1_5end | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_UIMC1_5end | |||
|id=chr5:176433693..176433812,- | |||
|ontology_enrichment_celltype=CL:0000037!2.14e-38!172;CL:0000566!2.14e-38!172;CL:0000738!1.09e-35!140;CL:0002032!1.75e-35!165;CL:0000837!1.75e-35!165;CL:0000988!1.12e-33!182;CL:0002087!3.61e-29!119;CL:0002031!9.16e-29!124;CL:0002057!2.30e-20!42;CL:0000860!3.82e-20!45;CL:0000763!2.02e-19!112;CL:0000049!2.02e-19!112;CL:0000766!3.91e-16!76;CL:0000542!3.13e-15!53;CL:0000051!3.13e-15!53;CL:0000838!3.34e-15!52;CL:0002009!2.32e-13!65;CL:0000557!3.34e-13!71;CL:0000839!4.84e-13!70;CL:0002194!1.17e-12!63;CL:0000576!1.17e-12!63;CL:0000040!1.17e-12!63;CL:0000559!1.17e-12!63;CL:0000945!5.62e-10!24;CL:0000826!5.62e-10!24;CL:0000236!9.80e-09!14;CL:0000791!2.39e-07!18;CL:0000789!2.39e-07!18;CL:0002420!2.39e-07!18;CL:0002419!2.39e-07!18;CL:0000790!2.39e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-16;33!CL:0002057;2.54e-16;33!CL:0000576;1.12e-12;48!CL:0002087;4.10e-11;104!CL:0000945;6.81e-10;24!CL:0000542;2.15e-09;53!CL:0000473;2.70e-09;39!CL:0000234;2.70e-09;39!CL:0000236;1.17e-08;13!CL:0000766;1.54e-08;69!CL:0000738;5.45e-08;136!CL:0000791;2.28e-07;18!CL:0000789;2.28e-07;18!CL:0002419;2.28e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.93e-39,168;CL:0000738,2.57e-36,136;CL:0002032,5.83e-36,161;CL:0000837,5.83e-36,161;CL:0000988,1.22e-34,177;CL:0002087,8.56e-30,115;CL:0002031,2.42e-29,120;CL:0000860,2.30e-20,42;CL:0002057,2.30e-20,42;CL:0000763,7.83e-20,108;CL:0000049,7.83e-20,108;CL:0000766,1.08e-16,72;CL:0000542,3.13e-15,53;CL:0000051,3.13e-15,53;CL:0000838,3.34e-15,52;CL:0000473,2.02e-14,48;CL:0000234,2.02e-14,48;CL:0002009,6.68e-14,61;CL:0000557,1.13e-13,67;CL:0000839,1.63e-13,66;CL:0002194,3.50e-13,59;CL:0000576,3.50e-13,59;CL:0000040,3.50e-13,59;CL:0000559,3.50e-13,59;CL:0000945,5.62e-10,24;CL:0000826,5.62e-10,24;CL:0000236,9.80e-09,14;CL:0000791,2.39e-07,18;CL:0000789,2.39e-07,18;CL:0002420,2.39e-07,18;CL:0002419,2.39e-07,18;CL:0000790,2.39e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;6.98e-15;42!CL:0000051;2.15e-09;53!CL:0000790;2.28e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.69e-17!102;UBERON:0003061!2.69e-17!102;UBERON:0002193!2.46e-14!112;UBERON:0002371!1.26e-10!80;UBERON:0001474!3.68e-10!86;UBERON:0007023!1.46e-08!115;UBERON:0000178!2.76e-07!15;UBERON:0000179!2.76e-07!15;UBERON:0000463!2.76e-07!15;UBERON:0004765!3.77e-07!101;UBERON:0001434!3.77e-07!101;UBERON:0002405!7.71e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-07;15!UBERON:0000179;2.63e-07;15!UBERON:0000463;2.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-17,98;UBERON:0003061,1.05e-17,98;UBERON:0002193,1.30e-14,108;UBERON:0002371,6.32e-11,76;UBERON:0001474,2.05e-10,82;UBERON:0002405,8.39e-10,93;UBERON:0007023,2.39e-08,114;UBERON:0004765,6.96e-08,90;UBERON:0000178,2.76e-07,15;UBERON:0000179,2.76e-07,15;UBERON:0000463,2.76e-07,15 | |||
|phase1_expression=5.08699461957559,5.78071414505655,5.07435854745496,4.00293193412522,6.25745532198203,6.10636966870258,2.53299878168311,3.79031924056099,4.70134130759709,5.16041266653169,3.48900583986214,5.02415155899396,5.53910654279752,7.79728023648294,2.98257638155124,7.39557661096953,7.8350288643117,1.46062018077475,6.8310591830671,2.70866327768933,1.63200552995402,3.76145665773705,7.15589967827642,10.2655818804663,7.65810101528297,16.8873626702972,14.9423072798901,15.4273131374811,31.0757778710634,35.3123046249436,27.8669021968937,7.35536979583142,8.433765725791,9.98335827450327,22.3880209677072,17.6289848284403,13.7992206487378,58.1695178958471,57.7568008714008,43.4021741431704,9.1805344438369,7.12566065241755,11.07574940827,27.044072412999,22.6725566213286,21.3473973845278,24.1726198381912,23.4365696172441,23.847390558923,20.1384674625505,18.4435708700952,17.4996850117553,46.5406668994435,32.9197188627751,35.2108865145289,22.9655654241978,19.9221489542227,22.0229014756183,27.2414664210103,25.0324641119353,28.7701706609569,19.791078011203,21.5420750231362,23.8685860298309,31.3425977718871,23.2627942123367,24.912889959823,30.4010884960659,19.8163508999677,25.1939059857935,27.848377121135,27.9891003350549,26.8993029324752,16.0554017597076,13.3940708977977,18.0306435137203,34.035575237388,28.8339634255692,34.8774523132664,11.6855224933912,14.7198341127327,10.5945209183488,38.719173781491,31.1299008419415,28.4642961236338,32.4314969150545,27.6273231054849,29.3123744376786,33.0522436392431,22.8972901088487,36.4296300230047,34.0597569835145,39.3741424968986,27.7559790015954,31.9489880899476,10.0085952214529,20.8512356320663,20.8295704257057,17.6817289139578,14.7124115943797,19.5553359980154,23.6723902867367,29.2240092611867,10.5839934040915,21.2116253381883,18.3873132504406,21.9351129649663,11.6563100950364,13.0059347559878,13.9772218913125,12.4357508003632,10.7227141721969,14.9769428793681,19.2629396224593,14.6349733326968,10.5377688708737,19.9274656672999,20.2740192834752,16.4462799812677,16.2468361305289,20.183587069549,17.1081368000707,15.0575119077773,17.5341657281553,24.9861453104692,27.466161237106,22.1704559168683,20.9671012953722,21.9300960542476,20.1305921397091,26.8187552945358,8.04841031644363,5.4980901592718,4.69870898099936,3.50936537445123,5.5041677205113,11.9292892057665,13.6257763684738,9.16987726491458,11.5299286680533,8.7834785693126,20.8911625418852,4.00724817121796,5.93255108455087,9.7364218096405,8.35822739036483,6.24902414438666,27.4264217951143,36.6076742899282,28.6022276023765,9.34183314623514,10.3228151412735,3.47140501607594,7.91431118693613,3.77549492588915,7.15306909044175,6.89683389571475,8.26933629341852,8.89415656716776,6.6944122552934,3.62546385398232,3.04108842287405,6.10155143870424,6.61793544622564,4.86085168729056,9.73367038296469,12.5736448670655,13.625989138482,6.13266549863533,1.89853131913626,6.22885929363385,96.1997047283262,89.1894607541148,3.05265836499774,5.96366342034382,5.19185097824777,11.2547803691236,16.0628507619336,7.09336764396714,7.28880880184999,5.33744978648525,4.9333509683432,11.5148083097914,10.2380110772963,8.50001896189985,3.93529311876822,6.91411109375999,7.0296429550139,6.24320153660641,4.56377457235559,7.47243402759005,12.4480568562391,11.1692331614011,8.70795001553941,12.2492502752936,8.47556789451199,11.0558585858069,5.94001428641027,8.65434252474949,6.37112953356618,3.59309070908119,11.1101835209684,9.63412603014124,7.48073111807294,9.65750765937843,8.88814607817157,9.91571188783539,7.48652408856139,16.862625754753,5.12537733164562,6.78182083710598,15.6047369963889,5.66788910811414,10.5632621418708,5.95573940261087,12.1518959213712,4.96928726322113,14.1362913576704,8.19244097916464,5.17267381820198,12.7803453305981,6.85114267947954,5.25637836162512,8.11695583285847,9.00062197949754,11.1853792201711,11.3435546700524,13.650566137113,9.41170937243099,7.67091807113741,6.81266297364197,9.12443397689575,6.25798129319264,9.00537313470039,4.14404764057442,7.89425477654364,5.77503585335668,7.57163520255001,5.39471008249925,6.50729780685401,9.0441057640563,7.40790109914181,4.74541238222193,7.41572194880904,8.24130153526453,8.46443745282059,4.42893272774789,4.20725321410337,2.4694440679884,2.94017422771084,3.80265104465493,15.725235466842,10.0434284135839,9.27072508770766,10.4540172761647,5.49016992955282,6.58501712451753,8.99214026060957,10.4550131308096,8.1477831739506,4.23550796903422,5.19967392639789,8.6598805215164,5.79652024875384,5.28339124061197,6.6408565970094,7.40776820122577,5.13686211033415,10.2726571734706,5.15091697256924,7.38651018262192,4.44608103764552,7.43155811443641,7.49870671894216,7.0552493843521,9.35715641799751,13.9711295416443,10.1721878479887,10.3513323374607,10.3459279958148,8.27655279724325,8.70778085271243,10.2325166926043,10.2256371075368,6.28629153492474,4.20187268114105,4.68869788840188,6.84289784090821,7.50640696734262,5.40617504119051,5.71652865261156,4.48524337381443,6.97536110133248,6.82046058134835,9.95392211334889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| |||
|short_description=p1@UIMC1 | |||
}} |
Revision as of 09:17, 22 January 2014
Short description: | p1@UIMC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UIMC1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000323774, ENST00000377220, ENST00000507513, ENST00000510698, ENST00000511320, ENST00000512031, NM_001199297, NM_001199298, uc003mfc.1, uc003mfd.1, uc003mfg.1, uc003mfh.1, uc010jkj.1_5end |
EntrezGene: | UIMC1 |
HGNC: | 30298 |
UniProt: | F2Z2T8D6RDZ5D6RCF3D6RCQ3Q96RL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-17 | 98 |
blood island | 1.05e-17 | 98 |
hemolymphoid system | 1.30e-14 | 108 |
bone marrow | 6.32e-11 | 76 |
bone element | 2.05e-10 | 82 |
immune system | 8.39e-10 | 93 |
adult organism | 2.39e-08 | 114 |
skeletal element | 6.96e-08 | 90 |
blood | 2.76e-07 | 15 |
haemolymphatic fluid | 2.76e-07 | 15 |
organism substance | 2.76e-07 | 15 |