FFCP PHASE1:Hg19::chr5:177652352..177652356,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=85007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28249 | |||
|TSSclassifier=weak | |||
|UniProt=Q8IUZ5 | |||
|association_with_transcript=-341bp_to_ENST00000476487,uc003mjd.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_AGXT2L2_5end | |||
|id=chr5:177652352..177652356,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.03e-17;3!CL:1000428;1.03e-17;3!CL:0002559;3.42e-11;5!CL:0002548;1.32e-09;6!CL:0002551;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,9.46e-18,3;CL:1000428,9.46e-18,3;CL:0002559,3.26e-11,5;CL:0002548,1.32e-09,6;CL:0002551,1.57e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!9.88e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;7.17e-23;9!UBERON:0000412;1.03e-17;3!UBERON:0001992;1.03e-17;3!UBERON:0002073;3.42e-11;5!UBERON:0000473;1.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,7.17e-23,9;UBERON:0004016,7.17e-23,9;UBERON:0010083,7.17e-23,9;UBERON:0000412,9.46e-18,3;UBERON:0001992,9.46e-18,3;UBERON:0002073,3.26e-11,5;UBERON:0005086,3.26e-11,5;UBERON:0000473,1.49e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.72038491523742,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,2.1349799145941,0,0,0,0,0.151357427644931,0,0,0,1.1409436430889,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0,0,4.31938579843965,0.803892390468535,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@AGXT2L2 | |||
}} |
Revision as of 09:22, 22 January 2014
Short description: | p6@AGXT2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_6_at_AGXT2L2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -341bp_to_ENST00000476487, uc003mjd.1_5end |
EntrezGene: | AGXT2L2 |
HGNC: | 28249 |
UniProt: | Q8IUZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 9.46e-18 | 3 |
stem cell of epidermis | 9.46e-18 | 3 |
hair follicle cell | 3.26e-11 | 5 |
cardiac fibroblast | 1.32e-09 | 6 |
fibroblast of dermis | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
dermis | 7.17e-23 | 9 |
dermatome | 7.17e-23 | 9 |
future dermis | 7.17e-23 | 9 |
dermal papilla | 9.46e-18 | 3 |
papillary layer of dermis | 9.46e-18 | 3 |
hair follicle | 3.26e-11 | 5 |
hair follicle placode | 3.26e-11 | 5 |
testis | 1.49e-07 | 8 |