FFCP PHASE1:Hg19::chr7:642261..642278,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr7:642261..642278,- | |||
|id=chr7:642261..642278,- | |||
|ontology_enrichment_celltype=CL:0000988!2.20e-31!182;CL:0000738!2.51e-31!140;CL:0000037!3.09e-30!172;CL:0000566!3.09e-30!172;CL:0002032!1.17e-28!165;CL:0000837!1.17e-28!165;CL:0002031!1.10e-27!124;CL:0000557!5.37e-24!71;CL:0000763!4.39e-23!112;CL:0000049!4.39e-23!112;CL:0000766!6.05e-23!76;CL:0002087!2.98e-22!119;CL:0000839!2.55e-21!70;CL:0002009!1.71e-18!65;CL:0002194!1.88e-16!63;CL:0000576!1.88e-16!63;CL:0000040!1.88e-16!63;CL:0000559!1.88e-16!63;CL:0002057!1.46e-15!42;CL:0000860!4.35e-14!45;CL:0000134!1.72e-11!358;CL:0002320!6.86e-11!365;CL:0002274!1.54e-10!5;CL:0000457!1.54e-10!5;CL:0002191!1.54e-10!5;CL:0000097!1.54e-10!5;CL:0000831!1.54e-10!5;CL:0002028!1.54e-10!5;CL:0000990!1.51e-09!8;CL:0000219!3.02e-09!390;CL:0000048!1.35e-08!430;CL:0000723!3.34e-08!436;CL:0000840!4.83e-08!5;CL:0001029!4.83e-08!5;CL:0000080!5.51e-08!6;CL:0000034!1.06e-07!444;CL:0000451!1.44e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.81e-23;5!CL:0000163;5.11e-13;9!CL:0002127;1.57e-08;1!CL:0000911;1.57e-08;1!CL:0000814;1.57e-08;1!CL:0000945;3.72e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.74e-23,5;CL:0002028,3.74e-23,5;CL:0002031,2.10e-13,120;CL:0000988,3.04e-13,177;CL:0000163,5.98e-13,9;CL:0000738,1.90e-11,136;CL:0002032,1.85e-10,161;CL:0000837,1.85e-10,161;CL:0000037,7.01e-10,168;CL:0000557,1.26e-08,67;CL:0002127,1.75e-08,1;CL:0000914,1.75e-08,1;CL:0000911,1.75e-08,1;CL:0000814,1.75e-08,1;CL:0002042,1.75e-08,1;CL:0002039,1.75e-08,1;CL:0002040,1.75e-08,1;CL:0002041,1.75e-08,1;CL:0000945,3.12e-07,24;CL:0000826,3.12e-07,24;CL:0000839,4.42e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.82e-08;1!DOID:0050177;3.82e-08;1!DOID:0050427;3.82e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.10e-08,1;DOID:0050177,3.10e-08,1;DOID:0050427,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.16e-35!102;UBERON:0003061!2.16e-35!102;UBERON:0002193!3.80e-32!112;UBERON:0002371!2.34e-24!80;UBERON:0001474!7.77e-22!86;UBERON:0002405!1.35e-18!115;UBERON:0004765!4.96e-18!101;UBERON:0001434!4.96e-18!101;UBERON:0003081!2.42e-13!216;UBERON:0000178!2.89e-11!15;UBERON:0000179!2.89e-11!15;UBERON:0000463!2.89e-11!15;UBERON:0002204!5.60e-11!167;UBERON:0002384!1.42e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.59e-16;15!UBERON:0000179;5.59e-16;15!UBERON:0000463;5.59e-16;15!UBERON:0002390;4.43e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.98e-17,98;UBERON:0003061,5.98e-17,98;UBERON:0000178,5.68e-16,15;UBERON:0000179,5.68e-16,15;UBERON:0000463,5.68e-16,15;UBERON:0002193,4.34e-15,108;UBERON:0003081,1.70e-07,203;UBERON:0002371,2.00e-07,76;UBERON:0002405,4.37e-07,93;UBERON:0001474,9.06e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82067028739756,2.95562122019805,2.99100968991981,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0.47296445977717,0,0,2.70852973188684,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0.56738522469114,1.86846674698672,0.251248665256743,1.0429658368404,0,0,0,0.316462387440884,0,0.637812899895131,0,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,1.11410456885174,0,0.443067789167242,0,0.896639238079726,1.04047478047903,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0.821127996921047,0,0,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,2.27183175558278,0.870648686496336,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.936017060556951,0.594524649154913,0,0,0,0,0,0,0.492663237895943,1.05658120815871,8.70778085271243,6.62951785718023,9.97315224068402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,2.35378802386407,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,1.23408681925858,0.648473311192717,1.08006287447623,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,1.47701766553283,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,1.09886179476517,0,0,0.19606253431774,0.503464760927528,0.569261198172555,0.317873157960757,0,0,0,0,0,0,0,1.18608451472249,1.60633120630454,1.04421949505455,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,1.05154941711726,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,1.36484205787483,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p@chr7:642261..642278,- | |||
}} |
Revision as of 15:20, 22 January 2014
Short description: | p@chr7:642261..642278, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:642261..642278, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.74e-23 | 5 |
basophil mast progenitor cell | 3.74e-23 | 5 |
hematopoietic lineage restricted progenitor cell | 2.10e-13 | 120 |
hematopoietic cell | 3.04e-13 | 177 |
endocrine cell | 5.98e-13 | 9 |
leukocyte | 1.90e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.85e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-10 | 161 |
hematopoietic stem cell | 7.01e-10 | 168 |
granulocyte monocyte progenitor cell | 1.26e-08 | 67 |
innate effector T cell | 1.75e-08 | 1 |
immature NK T cell | 1.75e-08 | 1 |
effector T cell | 1.75e-08 | 1 |
mature NK T cell | 1.75e-08 | 1 |
immature NK T cell stage IV | 1.75e-08 | 1 |
immature NK T cell stage I | 1.75e-08 | 1 |
immature NK T cell stage II | 1.75e-08 | 1 |
immature NK T cell stage III | 1.75e-08 | 1 |
lymphocyte of B lineage | 3.12e-07 | 24 |
pro-B cell | 3.12e-07 | 24 |
myeloid lineage restricted progenitor cell | 4.42e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.98e-17 | 98 |
blood island | 5.98e-17 | 98 |
blood | 5.68e-16 | 15 |
haemolymphatic fluid | 5.68e-16 | 15 |
organism substance | 5.68e-16 | 15 |
hemolymphoid system | 4.34e-15 | 108 |
lateral plate mesoderm | 1.70e-07 | 203 |
bone marrow | 2.00e-07 | 76 |
immune system | 4.37e-07 | 93 |
bone element | 9.06e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.10e-08 | 1 |
monogenic disease | 3.10e-08 | 1 |
xeroderma pigmentosum | 3.10e-08 | 1 |