FFCP PHASE1:Hg19::chr8:29931437..29931486,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=51669 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28789 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=54bp_to_AK130057_5end | |||
|description=CAGE_peak_5_at_TMEM66_5end | |||
|id=chr8:29931437..29931486,- | |||
|ontology_enrichment_celltype=CL:0000738!5.79e-20!140;CL:0002087!1.05e-17!119;CL:0002031!2.05e-16!124;CL:0000766!4.48e-16!76;CL:0002009!7.75e-16!65;CL:0002194!6.22e-15!63;CL:0000576!6.22e-15!63;CL:0000040!6.22e-15!63;CL:0000559!6.22e-15!63;CL:0002057!6.89e-14!42;CL:0000557!7.72e-14!71;CL:0000839!8.72e-13!70;CL:0000860!1.27e-12!45;CL:0000037!2.82e-12!172;CL:0000566!2.82e-12!172;CL:0002032!4.29e-11!165;CL:0000837!4.29e-11!165;CL:0000988!1.46e-10!182;CL:0000791!3.32e-09!18;CL:0000789!3.32e-09!18;CL:0002420!3.32e-09!18;CL:0002419!3.32e-09!18;CL:0000790!3.32e-09!18;CL:0000763!1.13e-07!112;CL:0000049!1.13e-07!112;CL:0000625!9.50e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.34e-12;18!CL:0000789;8.34e-12;18!CL:0002419;8.34e-12;18!CL:0000576;1.34e-10;48!CL:0000860;1.49e-10;33!CL:0002057;1.49e-10;33!CL:0000473;4.17e-10;39!CL:0000234;4.17e-10;39!CL:0000625;2.45e-08;11!CL:0000766;3.32e-08;69!CL:0000084;1.09e-07;25!CL:0000738;4.85e-07;136!CL:0002087;6.39e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.70e-25,136;CL:0002087,2.18e-22,115;CL:0002031,5.85e-21,120;CL:0000766,2.34e-19,72;CL:0002009,4.78e-19,61;CL:0000037,5.05e-18,168;CL:0002194,7.87e-18,59;CL:0000576,7.87e-18,59;CL:0000040,7.87e-18,59;CL:0000559,7.87e-18,59;CL:0000473,2.36e-17,48;CL:0000234,2.36e-17,48;CL:0002032,3.14e-17,161;CL:0000837,3.14e-17,161;CL:0000557,1.36e-16,67;CL:0000988,7.01e-16,177;CL:0000860,8.07e-16,42;CL:0002057,8.07e-16,42;CL:0000839,5.83e-15,66;CL:0000791,5.69e-12,18;CL:0000789,5.69e-12,18;CL:0002420,5.69e-12,18;CL:0002419,5.69e-12,18;CL:0000790,5.69e-12,18;CL:0000763,8.56e-12,108;CL:0000049,8.56e-12,108;CL:0000625,1.12e-08,11;CL:0000084,1.01e-07,25;CL:0000827,1.01e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;8.34e-12;18!CL:0002057;3.71e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.95e-12!102;UBERON:0003061!1.95e-12!102;UBERON:0002371!4.29e-11!80;UBERON:0002193!4.16e-10!112;UBERON:0007023!5.35e-10!115;UBERON:0001474!8.07e-10!86;UBERON:0004765!3.81e-08!101;UBERON:0001434!3.81e-08!101;UBERON:0001049!3.29e-07!57;UBERON:0005068!3.29e-07!57;UBERON:0006241!3.29e-07!57;UBERON:0007135!3.29e-07!57;UBERON:0002780!4.78e-07!41;UBERON:0001890!4.78e-07!41;UBERON:0006240!4.78e-07!41;UBERON:0003080!5.46e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.11e-14,98;UBERON:0003061,5.11e-14,98;UBERON:0002371,8.72e-14,76;UBERON:0001474,3.59e-12,82;UBERON:0002193,7.20e-11,108;UBERON:0004765,1.31e-09,90;UBERON:0002405,5.25e-09,93;UBERON:0001434,4.00e-08,100;UBERON:0002780,4.71e-07,41;UBERON:0001890,4.71e-07,41;UBERON:0003080,4.71e-07,41;UBERON:0006240,4.71e-07,41;UBERON:0007023,5.37e-07,114 | |||
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| |||
|short_description=p5@TMEM66 | |||
}} |
Revision as of 21:31, 22 January 2014
Short description: | p5@TMEM66 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_5_at_TMEM66_5end |
Coexpression cluster: | NA |
Association with transcript: | 54bp_to_AK130057_5end |
EntrezGene: | TMEM66 |
HGNC: | 28789 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.70e-25 | 136 |
nongranular leukocyte | 2.18e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 5.85e-21 | 120 |
myeloid leukocyte | 2.34e-19 | 72 |
macrophage dendritic cell progenitor | 4.78e-19 | 61 |
hematopoietic stem cell | 5.05e-18 | 168 |
monopoietic cell | 7.87e-18 | 59 |
monocyte | 7.87e-18 | 59 |
monoblast | 7.87e-18 | 59 |
promonocyte | 7.87e-18 | 59 |
defensive cell | 2.36e-17 | 48 |
phagocyte | 2.36e-17 | 48 |
hematopoietic oligopotent progenitor cell | 3.14e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.14e-17 | 161 |
granulocyte monocyte progenitor cell | 1.36e-16 | 67 |
hematopoietic cell | 7.01e-16 | 177 |
classical monocyte | 8.07e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.07e-16 | 42 |
myeloid lineage restricted progenitor cell | 5.83e-15 | 66 |
mature alpha-beta T cell | 5.69e-12 | 18 |
alpha-beta T cell | 5.69e-12 | 18 |
immature T cell | 5.69e-12 | 18 |
mature T cell | 5.69e-12 | 18 |
immature alpha-beta T cell | 5.69e-12 | 18 |
myeloid cell | 8.56e-12 | 108 |
common myeloid progenitor | 8.56e-12 | 108 |
CD8-positive, alpha-beta T cell | 1.12e-08 | 11 |
T cell | 1.01e-07 | 25 |
pro-T cell | 1.01e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.11e-14 | 98 |
blood island | 5.11e-14 | 98 |
bone marrow | 8.72e-14 | 76 |
bone element | 3.59e-12 | 82 |
hemolymphoid system | 7.20e-11 | 108 |
skeletal element | 1.31e-09 | 90 |
immune system | 5.25e-09 | 93 |
skeletal system | 4.00e-08 | 100 |
regional part of forebrain | 4.71e-07 | 41 |
forebrain | 4.71e-07 | 41 |
anterior neural tube | 4.71e-07 | 41 |
future forebrain | 4.71e-07 | 41 |
adult organism | 5.37e-07 | 114 |