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UBERON:0004140: Difference between revisions

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|is_obsolete=
|is_obsolete=
|located_in=
|located_in=
|name=heart field
|name=primary heart field
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0003081
|part_of=UBERON:0003081

Latest revision as of 17:44, 12 September 2014

Name:primary heart field
Namespace:FANTOM
Definition:"a specific region of the lateral mesoderm in which the heart will develop." [GO:0003128]
Xrefs:
links:
XAO:0004185
Synonyms: "primary heart field" EXACT [PMID:17276708, XAO:0004185]
Comments:note that this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0005291(embryonic tissue)
part_of:UBERON:0003081(lateral plate mesoderm)



Children

develops from:UBERON:0002084 (heart left ventricle),UBERON:0003084 (heart primordium)
part of:UBERON:0007005 (cardiac mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004140 (primary heart field), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data