FFCP PHASE1:Hg19::chr1:216286476..216286479,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:216286476..216286479,- | |||
|coexpression_cluster_id=C171 | |coexpression_cluster_id=C171 | ||
|description=CAGE_peak_at_chr1:216286476..216286479,- | |description=CAGE_peak_at_chr1:216286476..216286479,- | ||
Latest revision as of 03:52, 28 July 2015
| Short description: | p@chr1:216286476..216286479, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:216286476..216286479, - |
| Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:216286476..216286479- |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Merkel cell | 8.99e-131 | 2 |
| keratinocyte | 2.87e-53 | 5 |
| stratified squamous epithelial cell | 1.22e-44 | 6 |
| keratin accumulating cell | 1.22e-44 | 6 |
| stratified epithelial cell | 1.22e-44 | 6 |
| keratinizing barrier epithelial cell | 1.22e-44 | 6 |
| epithelial fate stem cell | 1.22e-44 | 6 |
| stratified epithelial stem cell | 1.22e-44 | 6 |
| surface ectodermal cell | 1.22e-44 | 6 |
| epidermal cell | 3.09e-30 | 9 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| skin epidermis | 1.13e-18 | 15 |
| outer epithelium | 1.13e-18 | 15 |
| enveloping layer of ectoderm | 1.13e-18 | 15 |
| skin of body | 1.47e-07 | 41 |
| integument | 7.52e-07 | 46 |
| integumental system | 7.52e-07 | 46 |
Showing 1 to 6 of 6 entries
