FFCP PHASE1:Hg19::chr1:28696111..28696130,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=65979 | |EntrezGene=entrezgene:65979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=25793 | |HGNC=HGNC:25793 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q8IZ21 | |UniProt=uniprot:Q8IZ21 | ||
|association_with_transcript=0bp_to_ENST00000373839_5end | |association_with_transcript=0bp_to_ENST00000373839_5end | ||
|cluster_id=chr1:28696111..28696130,+ | |||
|description=CAGE_peak_4_at_PHACTR4_5end | |description=CAGE_peak_4_at_PHACTR4_5end | ||
|id=chr1:28696111..28696130,+ | |id=chr1:28696111..28696130,+ | ||
Revision as of 06:57, 28 July 2015
| Short description: | p4@PHACTR4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_PHACTR4_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000373839_5end |
| EntrezGene: | 65979 |
| HGNC: | 25793 |
| UniProt: | Q8IZ21 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@PHACTR4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 2.10e-09 | 52 |
| lymphocyte | 4.90e-09 | 53 |
| common lymphoid progenitor | 4.90e-09 | 53 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.90e-09 | 114 |
| neural tube | 3.46e-07 | 56 |
| neural rod | 3.46e-07 | 56 |
| future spinal cord | 3.46e-07 | 56 |
| neural keel | 3.46e-07 | 56 |
| regional part of forebrain | 5.90e-07 | 41 |
| forebrain | 5.90e-07 | 41 |
| anterior neural tube | 5.90e-07 | 41 |
| future forebrain | 5.90e-07 | 41 |
Showing 1 to 9 of 9 entries
